Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC24.78■■□□□ 1.56
COL5A2P05997 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL5A2P05997 Z82202.1-201ENST00000623446 1880 ntBASIC24.78■■□□□ 1.56
COL5A2P05997 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC24.77■■□□□ 1.56
COL5A2P05997 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC24.77■■□□□ 1.56
COL5A2P05997 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC24.77■■□□□ 1.56
COL5A2P05997 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL5A2P05997 AC024563.2-201ENST00000603282 481 ntBASIC24.77■■□□□ 1.56
COL5A2P05997 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC24.77■■□□□ 1.56
COL5A2P05997 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
COL5A2P05997 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC24.77■■□□□ 1.56
COL5A2P05997 KRT89P-201ENST00000620027 1478 ntBASIC24.77■■□□□ 1.56
COL5A2P05997 AC034236.2-201ENST00000606662 1610 ntBASIC24.77■■□□□ 1.56
COL5A2P05997 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC24.77■■□□□ 1.56
COL5A2P05997 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
COL5A2P05997 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC24.77■■□□□ 1.56
COL5A2P05997 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC24.77■■□□□ 1.56
COL5A2P05997 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC24.77■■□□□ 1.56
COL5A2P05997 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC24.77■■□□□ 1.56
COL5A2P05997 AC018712.1-201ENST00000455767 687 ntBASIC24.77■■□□□ 1.56
COL5A2P05997 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC24.77■■□□□ 1.56
COL5A2P05997 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
COL5A2P05997 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC24.76■■□□□ 1.55
COL5A2P05997 KRT8P32-201ENST00000512863 1461 ntBASIC24.76■■□□□ 1.55
COL5A2P05997 AC006333.2-201ENST00000607957 2099 ntBASIC24.76■■□□□ 1.55
COL5A2P05997 AC092667.1-201ENST00000434301 2586 ntBASIC24.76■■□□□ 1.55
COL5A2P05997 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC24.76■■□□□ 1.55
COL5A2P05997 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 AL031284.1-201ENST00000419297 478 ntBASIC24.76■■□□□ 1.55
COL5A2P05997 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC24.76■■□□□ 1.55
COL5A2P05997 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC24.76■■□□□ 1.55
COL5A2P05997 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC24.76■■□□□ 1.55
COL5A2P05997 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC24.76■■□□□ 1.55
COL5A2P05997 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
COL5A2P05997 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC24.75■■□□□ 1.55
COL5A2P05997 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC24.75■■□□□ 1.55
COL5A2P05997 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 MED22-202ENST00000371999 987 ntTSL 3 BASIC24.75■■□□□ 1.55
COL5A2P05997 KRT18P58-201ENST00000527480 1120 ntBASIC24.75■■□□□ 1.55
COL5A2P05997 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC24.75■■□□□ 1.55
COL5A2P05997 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC24.75■■□□□ 1.55
COL5A2P05997 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC24.75■■□□□ 1.55
COL5A2P05997 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC24.74■■□□□ 1.55
COL5A2P05997 AL353692.3-201ENST00000407031 1396 ntBASIC24.74■■□□□ 1.55
COL5A2P05997 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
COL5A2P05997 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL5A2P05997 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC24.74■■□□□ 1.55
COL5A2P05997 FAM197Y8-203ENST00000450145 560 ntBASIC24.74■■□□□ 1.55
COL5A2P05997 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL5A2P05997 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC24.74■■□□□ 1.55
COL5A2P05997 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL5A2P05997 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
COL5A2P05997 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC24.74■■□□□ 1.55
COL5A2P05997 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC24.73■■□□□ 1.55
COL5A2P05997 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC24.73■■□□□ 1.55
COL5A2P05997 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC24.73■■□□□ 1.55
COL5A2P05997 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC24.73■■□□□ 1.55
COL5A2P05997 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
COL5A2P05997 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC24.73■■□□□ 1.55
COL5A2P05997 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
COL5A2P05997 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL5A2P05997 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC24.72■■□□□ 1.55
COL5A2P05997 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL5A2P05997 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC24.72■■□□□ 1.55
COL5A2P05997 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC24.72■■□□□ 1.55
COL5A2P05997 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC24.72■■□□□ 1.55
COL5A2P05997 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC24.72■■□□□ 1.55
COL5A2P05997 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
COL5A2P05997 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL5A2P05997 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC24.72■■□□□ 1.55
COL5A2P05997 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.72■■□□□ 1.55
COL5A2P05997 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC24.72■■□□□ 1.55
COL5A2P05997 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
COL5A2P05997 CYP51A1P1-201ENST00000492267 1507 ntBASIC24.72■■□□□ 1.55
COL5A2P05997 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC24.72■■□□□ 1.55
COL5A2P05997 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
COL5A2P05997 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms