Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.34■□□□□ 0.85
TIMP1P01033 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.34■□□□□ 0.85
TIMP1P01033 TERC-201ENST00000602385 541 ntBASIC20.34■□□□□ 0.85
TIMP1P01033 AL591684.3-201ENST00000605187 298 ntBASIC20.34■□□□□ 0.85
TIMP1P01033 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.34■□□□□ 0.85
TIMP1P01033 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC20.34■□□□□ 0.85
TIMP1P01033 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.34■□□□□ 0.85
TIMP1P01033 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
TIMP1P01033 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.34■□□□□ 0.85
TIMP1P01033 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.34■□□□□ 0.85
TIMP1P01033 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
TIMP1P01033 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.34■□□□□ 0.85
TIMP1P01033 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
TIMP1P01033 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.34■□□□□ 0.85
TIMP1P01033 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.33■□□□□ 0.85
TIMP1P01033 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
TIMP1P01033 FABP5-202ENST00000396359 986 ntTSL 5 BASIC20.33■□□□□ 0.85
TIMP1P01033 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
TIMP1P01033 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.33■□□□□ 0.85
TIMP1P01033 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.33■□□□□ 0.85
TIMP1P01033 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC20.33■□□□□ 0.85
TIMP1P01033 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.33■□□□□ 0.85
TIMP1P01033 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
TIMP1P01033 MIR5100-201ENST00000579544 119 ntBASIC20.33■□□□□ 0.85
TIMP1P01033 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.33■□□□□ 0.85
TIMP1P01033 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TIMP1P01033 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
TIMP1P01033 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
TIMP1P01033 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
TIMP1P01033 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
TIMP1P01033 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.33■□□□□ 0.84
TIMP1P01033 AC243591.1-201ENST00000452967 1364 ntBASIC20.33■□□□□ 0.84
TIMP1P01033 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TIMP1P01033 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TIMP1P01033 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC20.32■□□□□ 0.84
TIMP1P01033 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.32■□□□□ 0.84
TIMP1P01033 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.32■□□□□ 0.84
TIMP1P01033 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
TIMP1P01033 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 AC034236.2-201ENST00000606662 1610 ntBASIC20.31■□□□□ 0.84
TIMP1P01033 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TIMP1P01033 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 BX842568.4-201ENST00000421222 227 ntBASIC20.31■□□□□ 0.84
TIMP1P01033 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC20.31■□□□□ 0.84
TIMP1P01033 RPL13AP23-201ENST00000480739 586 ntBASIC20.31■□□□□ 0.84
TIMP1P01033 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
TIMP1P01033 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.31■□□□□ 0.84
TIMP1P01033 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.31■□□□□ 0.84
TIMP1P01033 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
TIMP1P01033 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.31■□□□□ 0.84
TIMP1P01033 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
TIMP1P01033 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 KRT89P-201ENST00000620027 1478 ntBASIC20.3■□□□□ 0.84
TIMP1P01033 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.3■□□□□ 0.84
TIMP1P01033 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.3■□□□□ 0.84
TIMP1P01033 AC006333.2-201ENST00000607957 2099 ntBASIC20.3■□□□□ 0.84
TIMP1P01033 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
TIMP1P01033 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.3■□□□□ 0.84
TIMP1P01033 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
TIMP1P01033 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC20.3■□□□□ 0.84
TIMP1P01033 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TIMP1P01033 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.3■□□□□ 0.84
TIMP1P01033 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.3■□□□□ 0.84
TIMP1P01033 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.3■□□□□ 0.84
TIMP1P01033 BNIP3P18-201ENST00000593976 575 ntBASIC20.3■□□□□ 0.84
TIMP1P01033 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms