Protein–RNA interactions for Protein: O95104

SCAF4, Splicing factor, arginine/serine-rich 15, humanhuman

Known RBP Predictions only

Length 1,147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4O95104 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.42■□□□□ 0.06
SCAF4O95104 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 AC139713.2-201ENST00000641328 2723 ntBASIC15.42■□□□□ 0.06
SCAF4O95104 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.42■□□□□ 0.06
SCAF4O95104 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.42■□□□□ 0.06
SCAF4O95104 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC15.42■□□□□ 0.06
SCAF4O95104 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
SCAF4O95104 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC15.42■□□□□ 0.06
SCAF4O95104 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.42■□□□□ 0.06
SCAF4O95104 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.41■□□□□ 0.06
SCAF4O95104 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SCAF4O95104 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
SCAF4O95104 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 MIPEPP3-201ENST00000412105 444 ntBASIC15.41■□□□□ 0.06
SCAF4O95104 GUSBP6-202ENST00000438529 1198 ntBASIC15.41■□□□□ 0.06
SCAF4O95104 AL138781.1-201ENST00000566567 1274 ntBASIC15.41■□□□□ 0.06
SCAF4O95104 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC15.41■□□□□ 0.06
SCAF4O95104 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
SCAF4O95104 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC15.41■□□□□ 0.06
SCAF4O95104 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.41■□□□□ 0.06
SCAF4O95104 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
SCAF4O95104 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
SCAF4O95104 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.4■□□□□ 0.06
SCAF4O95104 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.4■□□□□ 0.06
SCAF4O95104 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
SCAF4O95104 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SCAF4O95104 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SCAF4O95104 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.4■□□□□ 0.06
SCAF4O95104 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC15.4■□□□□ 0.06
SCAF4O95104 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 SERPINH1P1-201ENST00000419794 1249 ntBASIC15.4■□□□□ 0.06
SCAF4O95104 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC15.4■□□□□ 0.06
SCAF4O95104 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC15.4■□□□□ 0.06
SCAF4O95104 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
SCAF4O95104 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
SCAF4O95104 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC15.4■□□□□ 0.06
SCAF4O95104 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.4■□□□□ 0.06
SCAF4O95104 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC15.4■□□□□ 0.06
SCAF4O95104 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.4■□□□□ 0.06
SCAF4O95104 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
SCAF4O95104 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCAF4O95104 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SCAF4O95104 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SCAF4O95104 PRORSD1P-202ENST00000563365 2154 ntBASIC15.39■□□□□ 0.05
SCAF4O95104 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC15.39■□□□□ 0.05
SCAF4O95104 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC15.39■□□□□ 0.05
SCAF4O95104 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.39■□□□□ 0.05
SCAF4O95104 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC15.39■□□□□ 0.05
SCAF4O95104 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC15.39■□□□□ 0.05
SCAF4O95104 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCAF4O95104 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SCAF4O95104 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
SCAF4O95104 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SCAF4O95104 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SCAF4O95104 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms