Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 ZNF444P1-201ENST00000559497 298 ntBASIC23.69■■□□□ 1.38
CACNA1FO60840 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
CACNA1FO60840 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
CACNA1FO60840 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNA1FO60840 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.38
CACNA1FO60840 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC23.69■■□□□ 1.38
CACNA1FO60840 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNA1FO60840 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNA1FO60840 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CACNA1FO60840 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
CACNA1FO60840 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNA1FO60840 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CACNA1FO60840 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNA1FO60840 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CACNA1FO60840 SPDYE13P-201ENST00000445314 798 ntBASIC23.69■■□□□ 1.38
CACNA1FO60840 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.69■■□□□ 1.38
CACNA1FO60840 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC23.69■■□□□ 1.38
CACNA1FO60840 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
CACNA1FO60840 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CACNA1FO60840 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC23.68■■□□□ 1.38
CACNA1FO60840 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.68■■□□□ 1.38
CACNA1FO60840 DAP-202ENST00000432074 1048 ntTSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC23.68■■□□□ 1.38
CACNA1FO60840 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC23.68■■□□□ 1.38
CACNA1FO60840 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC23.68■■□□□ 1.38
CACNA1FO60840 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CACNA1FO60840 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
CACNA1FO60840 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 AL031598.1-201ENST00000561511 1773 ntBASIC23.68■■□□□ 1.38
CACNA1FO60840 BX323043.1-201ENST00000641006 1765 ntBASIC23.68■■□□□ 1.38
CACNA1FO60840 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.68■■□□□ 1.38
CACNA1FO60840 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
CACNA1FO60840 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
CACNA1FO60840 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 AL357033.4-201ENST00000617703 1807 ntBASIC23.67■■□□□ 1.38
CACNA1FO60840 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 GRAMD4P1-201ENST00000435181 1110 ntBASIC23.67■■□□□ 1.38
CACNA1FO60840 BX664615.1-201ENST00000443558 458 ntBASIC23.67■■□□□ 1.38
CACNA1FO60840 HOMER2P1-201ENST00000455653 964 ntBASIC23.67■■□□□ 1.38
CACNA1FO60840 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC23.67■■□□□ 1.38
CACNA1FO60840 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC23.67■■□□□ 1.38
CACNA1FO60840 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC23.67■■□□□ 1.38
CACNA1FO60840 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC23.67■■□□□ 1.38
CACNA1FO60840 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
CACNA1FO60840 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.67■■□□□ 1.38
CACNA1FO60840 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 MIR564-202ENST00000385049 94 ntBASIC23.67■■□□□ 1.38
CACNA1FO60840 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CACNA1FO60840 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC23.67■■□□□ 1.38
CACNA1FO60840 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC23.67■■□□□ 1.38
CACNA1FO60840 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
CACNA1FO60840 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC23.67■■□□□ 1.38
CACNA1FO60840 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC23.66■■□□□ 1.38
CACNA1FO60840 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC23.66■■□□□ 1.38
CACNA1FO60840 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC23.66■■□□□ 1.38
CACNA1FO60840 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC23.66■■□□□ 1.38
CACNA1FO60840 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.66■■□□□ 1.38
CACNA1FO60840 AC112497.1-201ENST00000624824 639 ntBASIC23.66■■□□□ 1.38
CACNA1FO60840 AL031432.5-201ENST00000641059 760 ntBASIC23.66■■□□□ 1.38
CACNA1FO60840 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC23.66■■□□□ 1.38
CACNA1FO60840 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.66■■□□□ 1.38
CACNA1FO60840 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CACNA1FO60840 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
CACNA1FO60840 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC23.65■■□□□ 1.38
CACNA1FO60840 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CACNA1FO60840 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CACNA1FO60840 PVRIG2P-201ENST00000435460 978 ntBASIC23.65■■□□□ 1.38
CACNA1FO60840 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC23.65■■□□□ 1.38
CACNA1FO60840 AC009065.1-201ENST00000564055 1225 ntBASIC23.65■■□□□ 1.38
CACNA1FO60840 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
CACNA1FO60840 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms