Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 uc_338.19-201ENST00000616808 99 ntBASIC-0.88□□□□□ -2.55
HLA-DQA1P01909 RNU4-32P-201ENST00000363404 141 ntBASIC-0.89□□□□□ -2.55
HLA-DQA1P01909 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.89□□□□□ -2.55
HLA-DQA1P01909 MIR1255B2-201ENST00000408618 67 ntBASIC-0.89□□□□□ -2.55
HLA-DQA1P01909 MIR4773-1-201ENST00000637203 78 ntBASIC-0.89□□□□□ -2.55
HLA-DQA1P01909 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.9□□□□□ -2.55
HLA-DQA1P01909 SCARNA23-201ENST00000516060 130 ntBASIC-0.9□□□□□ -2.55
HLA-DQA1P01909 AC026421.1-201ENST00000519101 163 ntBASIC-0.9□□□□□ -2.55
HLA-DQA1P01909 MIR3657-201ENST00000584818 117 ntBASIC-0.9□□□□□ -2.55
HLA-DQA1P01909 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.9□□□□□ -2.55
HLA-DQA1P01909 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 SNORA62.4-201ENST00000365504 151 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 MIR548I1-201ENST00000408810 149 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 CYP3A54P-201ENST00000566950 75 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 AC140658.3-201ENST00000567603 271 ntBASIC-0.91□□□□□ -2.56
HLA-DQA1P01909 RNU6-972P-201ENST00000391208 107 ntBASIC-0.92□□□□□ -2.56
HLA-DQA1P01909 RNU7-134P-201ENST00000458997 64 ntBASIC-0.92□□□□□ -2.56
HLA-DQA1P01909 RNU6-904P-201ENST00000516206 101 ntBASIC-0.92□□□□□ -2.56
HLA-DQA1P01909 MIR548AG1-201ENST00000579932 66 ntBASIC-0.92□□□□□ -2.56
HLA-DQA1P01909 AC006254.2-201ENST00000603259 279 ntBASIC-0.92□□□□□ -2.56
HLA-DQA1P01909 MIR6509-201ENST00000614603 85 ntBASIC-0.92□□□□□ -2.56
HLA-DQA1P01909 SNORD114-15-201ENST00000364687 72 ntBASIC-0.93□□□□□ -2.56
HLA-DQA1P01909 RNU6-746P-201ENST00000384112 109 ntBASIC-0.93□□□□□ -2.56
HLA-DQA1P01909 SNORD116-21-201ENST00000384507 92 ntBASIC-0.93□□□□□ -2.56
HLA-DQA1P01909 RNU6-887P-201ENST00000410660 100 ntBASIC-0.93□□□□□ -2.56
HLA-DQA1P01909 SCARNA17-201ENST00000516183 144 ntBASIC-0.93□□□□□ -2.56
HLA-DQA1P01909 RNU6-880P-201ENST00000384526 107 ntBASIC-0.94□□□□□ -2.56
HLA-DQA1P01909 snosnR66.1-201ENST00000391095 99 ntBASIC-0.94□□□□□ -2.56
HLA-DQA1P01909 SNORD63.1-201ENST00000516178 80 ntBASIC-0.94□□□□□ -2.56
HLA-DQA1P01909 RNU6-412P-201ENST00000516434 106 ntBASIC-0.94□□□□□ -2.56
HLA-DQA1P01909 MIR548AX-201ENST00000580117 73 ntBASIC-0.94□□□□□ -2.56
HLA-DQA1P01909 DLEU2_3.2-201ENST00000612883 73 ntBASIC-0.94□□□□□ -2.56
HLA-DQA1P01909 SNORD115-22-201ENST00000364456 82 ntBASIC-0.95□□□□□ -2.56
HLA-DQA1P01909 RNU7-153P-201ENST00000516455 62 ntBASIC-0.95□□□□□ -2.56
HLA-DQA1P01909 RNU6-794P-201ENST00000517261 64 ntBASIC-0.95□□□□□ -2.56
HLA-DQA1P01909 SNORA2.1-201ENST00000363089 137 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 SNORD116-14-201ENST00000383894 92 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 SNORD116-17-201ENST00000383929 92 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 SNORD116-15-201ENST00000384445 92 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 RNU6-30P-201ENST00000384561 107 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 SNORD116-19-201ENST00000384729 92 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 MIR519A2-201ENST00000384990 87 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 RNU2-51P-201ENST00000410708 197 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 RNA5SP470-201ENST00000516463 106 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 U6.81-201ENST00000612550 106 ntBASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.96□□□□□ -2.56
HLA-DQA1P01909 RNU5F-1-201ENST00000362507 117 ntBASIC-0.97□□□□□ -2.56
HLA-DQA1P01909 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.97□□□□□ -2.56
HLA-DQA1P01909 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.97□□□□□ -2.56
HLA-DQA1P01909 AL691482.2-201ENST00000457453 84 ntBASIC-0.97□□□□□ -2.56
HLA-DQA1P01909 RNU6-274P-201ENST00000459566 107 ntBASIC-0.97□□□□□ -2.56
HLA-DQA1P01909 RNU6-537P-201ENST00000517277 103 ntBASIC-0.97□□□□□ -2.56
HLA-DQA1P01909 MIR378F-201ENST00000578143 78 ntBASIC-0.97□□□□□ -2.56
HLA-DQA1P01909 MIR590-201ENST00000385008 97 ntBASIC-0.98□□□□□ -2.57
HLA-DQA1P01909 RNU7-61P-201ENST00000515897 61 ntBASIC-0.98□□□□□ -2.57
HLA-DQA1P01909 MIR4796-201ENST00000580742 81 ntBASIC-0.98□□□□□ -2.57
HLA-DQA1P01909 SNORD116-10-201ENST00000363791 102 ntBASIC-0.99□□□□□ -2.57
HLA-DQA1P01909 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.99□□□□□ -2.57
HLA-DQA1P01909 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.99□□□□□ -2.57
HLA-DQA1P01909 AP002795.1-201ENST00000534879 84 ntBASIC-0.99□□□□□ -2.57
HLA-DQA1P01909 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.99□□□□□ -2.57
HLA-DQA1P01909 Y_RNA.190-201ENST00000363964 101 ntBASIC-1□□□□□ -2.57
HLA-DQA1P01909 MIR521-2-201ENST00000384818 87 ntBASIC-1□□□□□ -2.57
HLA-DQA1P01909 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1□□□□□ -2.57
HLA-DQA1P01909 RNU6-162P-201ENST00000516228 103 ntBASIC-1□□□□□ -2.57
HLA-DQA1P01909 snoU83B.1-201ENST00000517136 88 ntBASIC-1□□□□□ -2.57
HLA-DQA1P01909 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1□□□□□ -2.57
HLA-DQA1P01909 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 SNORD115-27-201ENST00000364430 82 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 snoU13.19-201ENST00000459148 104 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 RNU6-109P-201ENST00000516364 107 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 RNU6-184P-201ENST00000516514 107 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 RNY1P9-201ENST00000532431 109 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 MIR3133-201ENST00000583157 78 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 MIR6739-201ENST00000622461 75 ntBASIC-1.01□□□□□ -2.57
HLA-DQA1P01909 RNA5SP26-201ENST00000362406 119 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 SNORA26.4-201ENST00000391188 123 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 MIR8485-201ENST00000401372 91 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 MIR1302-5-201ENST00000408164 150 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 MIR1236-201ENST00000408340 102 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 RNA5SP476-201ENST00000516613 103 ntBASIC-1.02□□□□□ -2.57
HLA-DQA1P01909 RNU6-924P-201ENST00000362926 108 ntBASIC-1.03□□□□□ -2.57
HLA-DQA1P01909 RNU6-774P-201ENST00000363238 107 ntBASIC-1.03□□□□□ -2.57
HLA-DQA1P01909 RNU6-518P-201ENST00000516056 96 ntBASIC-1.03□□□□□ -2.57
HLA-DQA1P01909 SNORD115-33-201ENST00000363723 82 ntBASIC-1.04□□□□□ -2.58
HLA-DQA1P01909 RNU6-246P-201ENST00000384702 107 ntBASIC-1.04□□□□□ -2.58
HLA-DQA1P01909 SNORD19-201ENST00000391191 68 ntBASIC-1.04□□□□□ -2.58
HLA-DQA1P01909 RNU6-704P-201ENST00000364162 103 ntBASIC-1.05□□□□□ -2.58
HLA-DQA1P01909 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.05□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 181.8 ms