Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 RNA5SP331-201ENST00000364986 107 ntBASIC-0.57□□□□□ -2.5
CDC42EP4Q9H3Q1 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.57□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.57□□□□□ -2.5
CDC42EP4Q9H3Q1 SNORD4B-201ENST00000459083 72 ntBASIC-0.57□□□□□ -2.5
CDC42EP4Q9H3Q1 AC097510.1-201ENST00000510945 133 ntBASIC-0.57□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR548Z-201ENST00000584743 97 ntBASIC-0.57□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 SNORA63.2-201ENST00000362603 126 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.495-201ENST00000384435 112 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR548U-201ENST00000390728 81 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR548I1-201ENST00000408810 149 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 SNORA40.17-201ENST00000517256 115 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR4280-201ENST00000582178 76 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 AC104996.3-201ENST00000590718 94 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 AL391099.1-201ENST00000624635 187 ntBASIC-0.58□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU4-36P-201ENST00000364294 144 ntBASIC-0.59□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.59□□□□□ -2.5
CDC42EP4Q9H3Q1 SNORA24B-201ENST00000384176 131 ntBASIC-0.59□□□□□ -2.5
CDC42EP4Q9H3Q1 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.59□□□□□ -2.5
CDC42EP4Q9H3Q1 snoU13.13-201ENST00000458842 104 ntBASIC-0.59□□□□□ -2.5
CDC42EP4Q9H3Q1 MIR3140-201ENST00000583685 90 ntBASIC-0.59□□□□□ -2.5
CDC42EP4Q9H3Q1 AC012531.4-201ENST00000616509 177 ntBASIC-0.59□□□□□ -2.5
CDC42EP4Q9H3Q1 RNU6-495P-201ENST00000362995 107 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD116-14-201ENST00000383894 92 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD116-17-201ENST00000383929 92 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD116-15-201ENST00000384445 92 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD116-19-201ENST00000384729 92 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 AL445193.1-201ENST00000441183 141 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-795P-201ENST00000516323 103 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.6□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-502P-201ENST00000362419 108 ntBASIC-0.61□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-880P-201ENST00000384526 107 ntBASIC-0.61□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.61□□□□□ -2.51
CDC42EP4Q9H3Q1 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.61□□□□□ -2.51
CDC42EP4Q9H3Q1 MIR6851-201ENST00000617060 67 ntBASIC-0.61□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD114-14-201ENST00000362723 75 ntBASIC-0.62□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-209P-201ENST00000384118 107 ntBASIC-0.62□□□□□ -2.51
CDC42EP4Q9H3Q1 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.62□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-476P-201ENST00000384726 107 ntBASIC-0.62□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-519P-201ENST00000410590 108 ntBASIC-0.62□□□□□ -2.51
CDC42EP4Q9H3Q1 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.62□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU4-32P-201ENST00000363404 141 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-973P-201ENST00000364690 107 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 RNA5SP292-201ENST00000390974 118 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORA19.1-201ENST00000410656 129 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-904P-201ENST00000516206 101 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-62P-201ENST00000516526 102 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 MIR3133-201ENST00000583157 78 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 MIR4436A-201ENST00000585278 85 ntBASIC-0.63□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD116-21-201ENST00000384507 92 ntBASIC-0.64□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.64□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU7-24P-201ENST00000458867 62 ntBASIC-0.64□□□□□ -2.51
CDC42EP4Q9H3Q1 SCARNA23-201ENST00000516060 130 ntBASIC-0.64□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-412P-201ENST00000516434 106 ntBASIC-0.64□□□□□ -2.51
CDC42EP4Q9H3Q1 MIR3671-201ENST00000580455 88 ntBASIC-0.64□□□□□ -2.51
CDC42EP4Q9H3Q1 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.64□□□□□ -2.51
CDC42EP4Q9H3Q1 RNU6-704P-201ENST00000364162 103 ntBASIC-0.65□□□□□ -2.51
CDC42EP4Q9H3Q1 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.65□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORA63.6-201ENST00000364921 119 ntBASIC-0.65□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD90-201ENST00000391145 111 ntBASIC-0.65□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.65□□□□□ -2.51
CDC42EP4Q9H3Q1 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.65□□□□□ -2.51
CDC42EP4Q9H3Q1 SNORD58A-201ENST00000383875 65 ntBASIC-0.66□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-972P-201ENST00000391208 107 ntBASIC-0.66□□□□□ -2.52
CDC42EP4Q9H3Q1 SNORA3B-201ENST00000391305 131 ntBASIC-0.66□□□□□ -2.52
CDC42EP4Q9H3Q1 SNORD75.2-201ENST00000408784 58 ntBASIC-0.66□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.66□□□□□ -2.52
CDC42EP4Q9H3Q1 MIR6773-201ENST00000612812 74 ntBASIC-0.66□□□□□ -2.52
CDC42EP4Q9H3Q1 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.67□□□□□ -2.52
CDC42EP4Q9H3Q1 MIR204-201ENST00000385200 110 ntBASIC-0.67□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-887P-201ENST00000410660 100 ntBASIC-0.67□□□□□ -2.52
CDC42EP4Q9H3Q1 SNX3P1X-201ENST00000414887 175 ntBASIC-0.67□□□□□ -2.52
CDC42EP4Q9H3Q1 SNORA18.5-201ENST00000516616 101 ntBASIC-0.67□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-537P-201ENST00000517277 103 ntBASIC-0.67□□□□□ -2.52
CDC42EP4Q9H3Q1 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.68□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-746P-201ENST00000384112 109 ntBASIC-0.68□□□□□ -2.52
CDC42EP4Q9H3Q1 MIR587-201ENST00000384845 96 ntBASIC-0.68□□□□□ -2.52
CDC42EP4Q9H3Q1 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.68□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-337P-201ENST00000391243 106 ntBASIC-0.68□□□□□ -2.52
CDC42EP4Q9H3Q1 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
CDC42EP4Q9H3Q1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.68□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-774P-201ENST00000363238 107 ntBASIC-0.69□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-990P-201ENST00000364385 104 ntBASIC-0.69□□□□□ -2.52
CDC42EP4Q9H3Q1 MIRLET7B-201ENST00000385140 83 ntBASIC-0.69□□□□□ -2.52
CDC42EP4Q9H3Q1 MIR5704-201ENST00000584029 77 ntBASIC-0.69□□□□□ -2.52
CDC42EP4Q9H3Q1 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-959P-201ENST00000384671 107 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 MIR1468-201ENST00000410600 86 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-592P-201ENST00000411333 103 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 MTATP6P29-201ENST00000415057 132 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 MIR6738-201ENST00000619620 64 ntBASIC-0.7□□□□□ -2.52
CDC42EP4Q9H3Q1 SNORD115-23-201ENST00000364461 82 ntBASIC-0.71□□□□□ -2.52
CDC42EP4Q9H3Q1 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.71□□□□□ -2.52
CDC42EP4Q9H3Q1 RNU6-10P-201ENST00000384036 107 ntBASIC-0.71□□□□□ -2.52
CDC42EP4Q9H3Q1 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.71□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 7.9 ms