Protein–RNA interactions for Protein: Q99958

FOXC2, Forkhead box protein C2, humanhuman

Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXC2Q99958 RNU6-495P-201ENST00000362995 107 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 SNORD114-4-201ENST00000363962 75 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 RNU6-746P-201ENST00000384112 109 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 RNU6-209P-201ENST00000384118 107 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 MIR1468-201ENST00000410600 86 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 SNORD2-201ENST00000459163 69 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 RNU6-904P-201ENST00000516206 101 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 Y_RNA.703-201ENST00000516846 111 ntBASIC-0.43□□□□□ -2.48
FOXC2Q99958 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.43□□□□□ -2.48
FOXC2Q99958 SNORD56B-201ENST00000384713 71 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU4-63P-201ENST00000411313 118 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-719P-201ENST00000516671 104 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-537P-201ENST00000517277 103 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 AP000676.1-201ENST00000533307 52 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 MIR3140-201ENST00000583685 90 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 AC104996.3-201ENST00000590718 94 ntBASIC-0.44□□□□□ -2.48
FOXC2Q99958 RNU6-502P-201ENST00000362419 108 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU4-36P-201ENST00000364294 144 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-880P-201ENST00000384526 107 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.45□□□□□ -2.48
FOXC2Q99958 AC097510.1-201ENST00000510945 133 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-795P-201ENST00000516323 103 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-62P-201ENST00000516526 102 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-762P-201ENST00000517107 102 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 MIR4432-201ENST00000581823 84 ntBASIC-0.45□□□□□ -2.48
FOXC2Q99958 RNU6-81P-201ENST00000365608 104 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 SNORD58A-201ENST00000383875 65 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 SNORD116-21-201ENST00000384507 92 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 MIR548U-201ENST00000390728 81 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU6-284P-201ENST00000411105 106 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU7-24P-201ENST00000458867 62 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 FGF7P7-201ENST00000514120 227 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 RNU6-412P-201ENST00000516434 106 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 SNORA40.17-201ENST00000517256 115 ntBASIC-0.46□□□□□ -2.48
FOXC2Q99958 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-959P-201ENST00000384671 107 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-476P-201ENST00000384726 107 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNA5SP292-201ENST00000390974 118 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 SNORD90-201ENST00000391145 111 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 SNORA19.1-201ENST00000410656 129 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 SCARNA23-201ENST00000516060 130 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.47□□□□□ -2.48
FOXC2Q99958 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.48□□□□□ -2.49
FOXC2Q99958 snoU13.13-201ENST00000458842 104 ntBASIC-0.48□□□□□ -2.49
FOXC2Q99958 MIR548AZ-201ENST00000616567 95 ntBASIC-0.48□□□□□ -2.49
FOXC2Q99958 RNU6-774P-201ENST00000363238 107 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 SNORA32.3-201ENST00000384772 121 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 RNU6-972P-201ENST00000391208 107 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 RNU6-519P-201ENST00000410590 108 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 RNA5SP169-201ENST00000517268 117 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 MIR3668-201ENST00000582138 75 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 MIR6851-201ENST00000617060 67 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 AL391099.1-201ENST00000624635 187 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 AC093726.3-201ENST00000637588 150 ntBASIC-0.49□□□□□ -2.49
FOXC2Q99958 SNORD114-14-201ENST00000362723 75 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 RNU6-973P-201ENST00000364690 107 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 MT-TR-201ENST00000387439 65 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 RNU6-1177P-201ENST00000391058 104 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 RNU6-887P-201ENST00000410660 100 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 AC114755.3-201ENST00000481111 251 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 SNORA18.5-201ENST00000516616 101 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 uc_338.36-201ENST00000622331 158 ntBASIC-0.5□□□□□ -2.49
FOXC2Q99958 MT-TQ-201ENST00000387372 72 ntBASIC-0.51□□□□□ -2.49
FOXC2Q99958 RNU6-337P-201ENST00000391243 106 ntBASIC-0.51□□□□□ -2.49
FOXC2Q99958 SNORD75.2-201ENST00000408784 58 ntBASIC-0.51□□□□□ -2.49
FOXC2Q99958 RNU6-106P-201ENST00000384405 107 ntBASIC-0.52□□□□□ -2.49
FOXC2Q99958 MIR590-201ENST00000385008 97 ntBASIC-0.52□□□□□ -2.49
FOXC2Q99958 MIR6773-201ENST00000612812 74 ntBASIC-0.52□□□□□ -2.49
FOXC2Q99958 SNORD115-23-201ENST00000364461 82 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 SNORA63.6-201ENST00000364921 119 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 AC008267.6-201ENST00000441664 139 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 AC026421.1-201ENST00000519101 163 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-0.53□□□□□ -2.49
FOXC2Q99958 Y_RNA.96-201ENST00000363092 109 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 SNORD116-10-201ENST00000363791 102 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 RNU6-990P-201ENST00000364385 104 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
FOXC2Q99958 SNORD75.1-201ENST00000408373 60 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 RNU6-592P-201ENST00000411333 103 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.54□□□□□ -2.5
FOXC2Q99958 SNORD38.3-201ENST00000516599 73 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 AL365222.1-201ENST00000614661 98 ntBASIC-0.54□□□□□ -2.5
FOXC2Q99958 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-382P-201ENST00000365181 106 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 Y_RNA.371-201ENST00000365591 113 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-901P-201ENST00000384593 106 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 MIRLET7B-201ENST00000385140 83 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 MIR1302-5-201ENST00000408164 150 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-554P-201ENST00000410466 106 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 RNU6-1064P-201ENST00000410626 104 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 MTATP6P29-201ENST00000415057 132 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 AL445193.1-201ENST00000441183 141 ntBASIC-0.55□□□□□ -2.5
FOXC2Q99958 snoU13.17-201ENST00000458802 104 ntBASIC-0.55□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 197.1 ms