Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 RNU6-721P-201ENST00000410155 105 ntBASIC2.32□□□□□ -2.04
ATN1P54259 U6.58-201ENST00000613107 107 ntBASIC2.32□□□□□ -2.04
ATN1P54259 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
ATN1P54259 SNORD79.1-201ENST00000516069 84 ntBASIC2.31□□□□□ -2.04
ATN1P54259 snoU13.31-201ENST00000607291 104 ntBASIC2.31□□□□□ -2.04
ATN1P54259 RNU6-910P-201ENST00000390844 107 ntBASIC2.3□□□□□ -2.04
ATN1P54259 RNU7-151P-201ENST00000516930 53 ntBASIC2.3□□□□□ -2.04
ATN1P54259 MIR378A-201ENST00000362177 66 ntBASIC2.29□□□□□ -2.04
ATN1P54259 SCARNA16.5-201ENST00000517114 183 ntBASIC2.29□□□□□ -2.04
ATN1P54259 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
ATN1P54259 RNU6-828P-201ENST00000364876 107 ntBASIC2.28□□□□□ -2.04
ATN1P54259 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.27□□□□□ -2.05
ATN1P54259 RNA5SP37-201ENST00000365420 130 ntBASIC2.27□□□□□ -2.05
ATN1P54259 RNU4-52P-201ENST00000384209 138 ntBASIC2.27□□□□□ -2.05
ATN1P54259 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC2.27□□□□□ -2.05
ATN1P54259 MIR4473-201ENST00000583731 91 ntBASIC2.27□□□□□ -2.05
ATN1P54259 SNORD115-25-201ENST00000362619 82 ntBASIC2.26□□□□□ -2.05
ATN1P54259 RNU1-92P-201ENST00000517017 135 ntBASIC2.26□□□□□ -2.05
ATN1P54259 Y_RNA.355-201ENST00000365462 98 ntBASIC2.25□□□□□ -2.05
ATN1P54259 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC2.25□□□□□ -2.05
ATN1P54259 RNU6-321P-201ENST00000410912 106 ntBASIC2.25□□□□□ -2.05
ATN1P54259 U7.7-201ENST00000459276 60 ntBASIC2.25□□□□□ -2.05
ATN1P54259 RNA5SP470-201ENST00000516463 106 ntBASIC2.25□□□□□ -2.05
ATN1P54259 SNORA48.3-201ENST00000391081 134 ntBASIC2.24□□□□□ -2.05
ATN1P54259 RNU6ATAC8P-201ENST00000408460 126 ntBASIC2.24□□□□□ -2.05
ATN1P54259 AC006210.1-201ENST00000424882 111 ntBASIC2.24□□□□□ -2.05
ATN1P54259 SNORD13-201ENST00000459299 104 ntBASIC2.24□□□□□ -2.05
ATN1P54259 RNA5SP182-201ENST00000516064 82 ntBASIC2.24□□□□□ -2.05
ATN1P54259 MIR3678-201ENST00000578455 94 ntBASIC2.24□□□□□ -2.05
ATN1P54259 AC138207.3-201ENST00000585289 166 ntBASIC2.24□□□□□ -2.05
ATN1P54259 RNA5SP190-201ENST00000365222 118 ntBASIC2.23□□□□□ -2.05
ATN1P54259 SNORD110-201ENST00000408189 75 ntBASIC2.23□□□□□ -2.05
ATN1P54259 AC003989.2-201ENST00000440224 169 ntBASIC2.23□□□□□ -2.05
ATN1P54259 MIR4299-201ENST00000577899 72 ntBASIC2.23□□□□□ -2.05
ATN1P54259 MIR8070-201ENST00000616510 88 ntBASIC2.23□□□□□ -2.05
ATN1P54259 SNORD45.2-201ENST00000363552 72 ntBASIC2.22□□□□□ -2.05
ATN1P54259 RNU6-598P-201ENST00000364017 105 ntBASIC2.22□□□□□ -2.05
ATN1P54259 RNU6-945P-201ENST00000383947 107 ntBASIC2.22□□□□□ -2.05
ATN1P54259 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.22□□□□□ -2.05
ATN1P54259 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.21□□□□□ -2.06
ATN1P54259 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ATN1P54259 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
ATN1P54259 RNU6-59P-201ENST00000384787 107 ntBASIC2.21□□□□□ -2.06
ATN1P54259 RNU6-995P-201ENST00000391244 107 ntBASIC2.21□□□□□ -2.06
ATN1P54259 SNORD2-201ENST00000459163 69 ntBASIC2.21□□□□□ -2.06
ATN1P54259 MIR6828-201ENST00000636181 60 ntBASIC2.21□□□□□ -2.06
ATN1P54259 MIRLET7G-201ENST00000362280 84 ntBASIC2.2□□□□□ -2.06
ATN1P54259 MIR499A-201ENST00000384903 122 ntBASIC2.2□□□□□ -2.06
ATN1P54259 MIR125B1-201ENST00000385236 88 ntBASIC2.2□□□□□ -2.06
ATN1P54259 AL356379.1-201ENST00000414105 126 ntBASIC2.2□□□□□ -2.06
ATN1P54259 AC244090.1-201ENST00000441884 93 ntBASIC2.2□□□□□ -2.06
ATN1P54259 SNORA25.15-201ENST00000516487 89 ntBASIC2.2□□□□□ -2.06
ATN1P54259 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.2□□□□□ -2.06
ATN1P54259 U2.18-201ENST00000622185 84 ntBASIC2.2□□□□□ -2.06
ATN1P54259 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATN1P54259 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
ATN1P54259 RNU6-337P-201ENST00000391243 106 ntBASIC2.19□□□□□ -2.06
ATN1P54259 TRMT112P2-201ENST00000512910 132 ntBASIC2.19□□□□□ -2.06
ATN1P54259 MIR8081-201ENST00000611533 95 ntBASIC2.19□□□□□ -2.06
ATN1P54259 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
ATN1P54259 MIR20A-201ENST00000362279 71 ntBASIC2.18□□□□□ -2.06
ATN1P54259 SNORD12-201ENST00000391002 90 ntBASIC2.18□□□□□ -2.06
ATN1P54259 RNU1-78P-201ENST00000391248 165 ntBASIC2.18□□□□□ -2.06
ATN1P54259 RNU4-62P-201ENST00000410125 130 ntBASIC2.18□□□□□ -2.06
ATN1P54259 RNA5SP94-201ENST00000516917 108 ntBASIC2.18□□□□□ -2.06
ATN1P54259 RNU6-1110P-201ENST00000516462 101 ntBASIC2.17□□□□□ -2.06
ATN1P54259 AC025627.3-201ENST00000582078 182 ntBASIC2.17□□□□□ -2.06
ATN1P54259 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC2.17□□□□□ -2.06
ATN1P54259 MIR548AA1-201ENST00000384971 97 ntBASIC2.16□□□□□ -2.06
ATN1P54259 SNORD105-201ENST00000386910 85 ntBASIC2.16□□□□□ -2.06
ATN1P54259 MIR4448-201ENST00000584360 86 ntBASIC2.16□□□□□ -2.06
ATN1P54259 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
ATN1P54259 MIR489-201ENST00000384923 84 ntBASIC2.15□□□□□ -2.07
ATN1P54259 AP1B1P2-201ENST00000416196 106 ntBASIC2.15□□□□□ -2.07
ATN1P54259 SNORA70.22-201ENST00000517160 124 ntBASIC2.15□□□□□ -2.07
ATN1P54259 MIR6773-201ENST00000612812 74 ntBASIC2.15□□□□□ -2.07
ATN1P54259 MIR17-201ENST00000385012 84 ntBASIC2.14□□□□□ -2.07
ATN1P54259 RNA5SP227-201ENST00000516184 113 ntBASIC2.14□□□□□ -2.07
ATN1P54259 RNU1-40P-201ENST00000516816 164 ntBASIC2.14□□□□□ -2.07
ATN1P54259 RNU1-97P-201ENST00000516872 164 ntBASIC2.14□□□□□ -2.07
ATN1P54259 MIR3198-2-201ENST00000577868 80 ntBASIC2.14□□□□□ -2.07
ATN1P54259 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC2.14□□□□□ -2.07
ATN1P54259 AC084768.2-201ENST00000622736 221 ntBASIC2.14□□□□□ -2.07
ATN1P54259 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
ATN1P54259 RNU6-1008P-201ENST00000384160 104 ntBASIC2.13□□□□□ -2.07
ATN1P54259 MIR4422-201ENST00000581938 83 ntBASIC2.13□□□□□ -2.07
ATN1P54259 AP000553.5-201ENST00000641933 54 ntBASIC2.13□□□□□ -2.07
ATN1P54259 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.13□□□□□ -2.07
ATN1P54259 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.12□□□□□ -2.07
ATN1P54259 uc_338.20-201ENST00000621563 178 ntBASIC2.12□□□□□ -2.07
ATN1P54259 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
ATN1P54259 SNORD89-201ENST00000390981 114 ntBASIC2.11□□□□□ -2.07
ATN1P54259 MIR548H4-201ENST00000408689 111 ntBASIC2.11□□□□□ -2.07
ATN1P54259 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.11□□□□□ -2.07
ATN1P54259 MIR4303-201ENST00000581299 66 ntBASIC2.11□□□□□ -2.07
ATN1P54259 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
ATN1P54259 MIR29B1-201ENST00000385015 81 ntBASIC2.1□□□□□ -2.07
ATN1P54259 MIR9-3-201ENST00000385084 90 ntBASIC2.1□□□□□ -2.07
ATN1P54259 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
ATN1P54259 AC104435.1-201ENST00000483483 166 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 225.4 ms