Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 Y_RNA.250-201ENST00000364542 110 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 RNU6-1187P-201ENST00000364771 110 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 RNU6-499P-201ENST00000365615 107 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 RNU6-716P-201ENST00000365621 103 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 SNORD26-201ENST00000384147 75 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 AC110620.1-201ENST00000416042 228 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 SNORD13-201ENST00000459299 104 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 MIR7843-201ENST00000622274 79 ntBASIC1.63□□□□□ -2.15
PCDHGC3Q9UN70 RNU4-45P-201ENST00000365469 141 ntBASIC1.62□□□□□ -2.15
PCDHGC3Q9UN70 MIR517C-201ENST00000385103 95 ntBASIC1.62□□□□□ -2.15
PCDHGC3Q9UN70 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 RNU6-645P-201ENST00000364649 106 ntBASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 RNU6-997P-201ENST00000384725 107 ntBASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 SNORA67.5-201ENST00000391036 107 ntBASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 AL591806.2-201ENST00000433122 173 ntBASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 SNORD124-201ENST00000459577 104 ntBASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 RNU6-548P-201ENST00000517083 115 ntBASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 MIR3124-201ENST00000582636 67 ntBASIC1.61□□□□□ -2.15
PCDHGC3Q9UN70 SNORA25.8-201ENST00000364831 128 ntBASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 Y_RNA.375-201ENST00000365625 101 ntBASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 IL6ST-202ENST00000381286 201 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 MIR764-201ENST00000390811 85 ntBASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 MIR1323-201ENST00000408090 73 ntBASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 snoU13.23-201ENST00000458863 104 ntBASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 AC007991.2-201ENST00000520185 102 ntTSL 5 BASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC1.6□□□□□ -2.15
PCDHGC3Q9UN70 MIR320A-201ENST00000385302 82 ntBASIC1.59□□□□□ -2.15
PCDHGC3Q9UN70 RNU6-269P-201ENST00000391077 97 ntBASIC1.59□□□□□ -2.15
PCDHGC3Q9UN70 SNORD53B-201ENST00000577887 78 ntBASIC1.59□□□□□ -2.15
PCDHGC3Q9UN70 MIR6828-201ENST00000636181 60 ntBASIC1.59□□□□□ -2.15
PCDHGC3Q9UN70 MIR618-201ENST00000385287 98 ntBASIC1.58□□□□□ -2.16
PCDHGC3Q9UN70 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
PCDHGC3Q9UN70 MIR6739-201ENST00000622461 75 ntBASIC1.58□□□□□ -2.16
PCDHGC3Q9UN70 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.58□□□□□ -2.16
PCDHGC3Q9UN70 RNA5SP215-201ENST00000363440 122 ntBASIC1.57□□□□□ -2.16
PCDHGC3Q9UN70 RNU1-124P-201ENST00000363861 145 ntBASIC1.57□□□□□ -2.16
PCDHGC3Q9UN70 RPS29P23-201ENST00000458635 123 ntBASIC1.57□□□□□ -2.16
PCDHGC3Q9UN70 AC018659.1-201ENST00000551083 169 ntBASIC1.57□□□□□ -2.16
PCDHGC3Q9UN70 MIR4524B-201ENST00000581569 115 ntBASIC1.57□□□□□ -2.16
PCDHGC3Q9UN70 AL162376.1-201ENST00000624117 175 ntBASIC1.57□□□□□ -2.16
PCDHGC3Q9UN70 RNU1-17P-201ENST00000363022 152 ntBASIC1.56□□□□□ -2.16
PCDHGC3Q9UN70 SNORA67.6-201ENST00000391093 99 ntBASIC1.56□□□□□ -2.16
PCDHGC3Q9UN70 MTND4LP19-201ENST00000403051 166 ntBASIC1.56□□□□□ -2.16
PCDHGC3Q9UN70 RNA5SP255-201ENST00000516370 107 ntBASIC1.56□□□□□ -2.16
PCDHGC3Q9UN70 SNORA31.24-201ENST00000517232 57 ntBASIC1.56□□□□□ -2.16
PCDHGC3Q9UN70 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
PCDHGC3Q9UN70 RNU6-1162P-201ENST00000384443 104 ntBASIC1.55□□□□□ -2.16
PCDHGC3Q9UN70 RNU6-237P-201ENST00000515985 71 ntBASIC1.55□□□□□ -2.16
PCDHGC3Q9UN70 RNA5SP227-201ENST00000516184 113 ntBASIC1.55□□□□□ -2.16
PCDHGC3Q9UN70 AL109933.3-201ENST00000619095 188 ntBASIC1.55□□□□□ -2.16
PCDHGC3Q9UN70 RNU1-42P-201ENST00000364033 160 ntBASIC1.54□□□□□ -2.16
PCDHGC3Q9UN70 AL354695.1-201ENST00000427935 228 ntBASIC1.54□□□□□ -2.16
PCDHGC3Q9UN70 RNA5SP404-201ENST00000517118 132 ntBASIC1.54□□□□□ -2.16
PCDHGC3Q9UN70 AC015712.3-201ENST00000559380 164 ntBASIC1.54□□□□□ -2.16
PCDHGC3Q9UN70 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
PCDHGC3Q9UN70 RNA5SP484-201ENST00000458857 111 ntBASIC1.53□□□□□ -2.16
PCDHGC3Q9UN70 AC108210.2-201ENST00000503681 201 ntBASIC1.53□□□□□ -2.16
PCDHGC3Q9UN70 RNU5B-6P-201ENST00000516765 68 ntBASIC1.53□□□□□ -2.16
PCDHGC3Q9UN70 RNU6-990P-201ENST00000364385 104 ntBASIC1.52□□□□□ -2.17
PCDHGC3Q9UN70 RNA5SP147-201ENST00000516493 109 ntBASIC1.52□□□□□ -2.17
PCDHGC3Q9UN70 MIR4303-201ENST00000581299 66 ntBASIC1.52□□□□□ -2.17
PCDHGC3Q9UN70 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.52□□□□□ -2.17
PCDHGC3Q9UN70 MIR18A-201ENST00000362310 71 ntBASIC1.51□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-302P-201ENST00000365249 107 ntBASIC1.51□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-1335P-201ENST00000365426 107 ntBASIC1.51□□□□□ -2.17
PCDHGC3Q9UN70 SNORA17.3-201ENST00000391159 129 ntBASIC1.51□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-656P-201ENST00000516785 107 ntBASIC1.51□□□□□ -2.17
PCDHGC3Q9UN70 AC011195.1-201ENST00000578177 177 ntBASIC1.51□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-482P-201ENST00000391068 107 ntBASIC1.5□□□□□ -2.17
PCDHGC3Q9UN70 SNORD99-201ENST00000408612 74 ntBASIC1.5□□□□□ -2.17
PCDHGC3Q9UN70 MIR4769-201ENST00000584126 77 ntBASIC1.5□□□□□ -2.17
PCDHGC3Q9UN70 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC1.5□□□□□ -2.17
PCDHGC3Q9UN70 AC092634.7-201ENST00000621022 103 ntBASIC1.5□□□□□ -2.17
PCDHGC3Q9UN70 Y_RNA.407-201ENST00000383986 113 ntBASIC1.49□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-987P-201ENST00000384759 104 ntBASIC1.49□□□□□ -2.17
PCDHGC3Q9UN70 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.49□□□□□ -2.17
PCDHGC3Q9UN70 RNA5SP268-201ENST00000516828 124 ntBASIC1.49□□□□□ -2.17
PCDHGC3Q9UN70 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC1.49□□□□□ -2.17
PCDHGC3Q9UN70 C9orf84-201ENST00000318737 4661 ntAPPRIS P3 TSL 1 (best) BASIC1.49□□□□□ -2.17
PCDHGC3Q9UN70 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
PCDHGC3Q9UN70 SNORA15B-2-201ENST00000384058 135 ntBASIC1.48□□□□□ -2.17
PCDHGC3Q9UN70 SNORA15B-1-201ENST00000384334 135 ntBASIC1.48□□□□□ -2.17
PCDHGC3Q9UN70 MIR521-2-201ENST00000384818 87 ntBASIC1.48□□□□□ -2.17
PCDHGC3Q9UN70 RNA5SP61-201ENST00000516453 100 ntBASIC1.48□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-1089P-201ENST00000516473 104 ntBASIC1.48□□□□□ -2.17
PCDHGC3Q9UN70 SNORA40.17-201ENST00000517256 115 ntBASIC1.48□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-940P-201ENST00000363433 104 ntBASIC1.47□□□□□ -2.17
PCDHGC3Q9UN70 SNORA25.5-201ENST00000363782 126 ntBASIC1.47□□□□□ -2.17
PCDHGC3Q9UN70 RNU6-955P-201ENST00000410497 104 ntBASIC1.47□□□□□ -2.17
PCDHGC3Q9UN70 SCARNA21.1-201ENST00000515996 128 ntBASIC1.47□□□□□ -2.17
PCDHGC3Q9UN70 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
PCDHGC3Q9UN70 MIR26B-201ENST00000362251 77 ntBASIC1.46□□□□□ -2.18
PCDHGC3Q9UN70 MIR758-201ENST00000390227 88 ntBASIC1.46□□□□□ -2.18
PCDHGC3Q9UN70 RNA5SP299-201ENST00000391203 116 ntBASIC1.46□□□□□ -2.18
PCDHGC3Q9UN70 RNU4-37P-201ENST00000410214 84 ntBASIC1.46□□□□□ -2.18
PCDHGC3Q9UN70 AC006210.1-201ENST00000424882 111 ntBASIC1.46□□□□□ -2.18
PCDHGC3Q9UN70 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC1.46□□□□□ -2.18
PCDHGC3Q9UN70 SCARNA17.3-201ENST00000516381 125 ntBASIC1.45□□□□□ -2.18
PCDHGC3Q9UN70 AL353997.5-201ENST00000618886 171 ntBASIC1.45□□□□□ -2.18
PCDHGC3Q9UN70 SNORD110-201ENST00000408189 75 ntBASIC1.44□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms