Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.38□□□□□ -2.47
RNF41Q9H4P4 RNU6-813P-201ENST00000384691 107 ntBASIC-0.38□□□□□ -2.47
RNF41Q9H4P4 U3.27-201ENST00000391237 200 ntBASIC-0.38□□□□□ -2.47
RNF41Q9H4P4 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.38□□□□□ -2.47
RNF41Q9H4P4 RNA5SP285-201ENST00000516619 119 ntBASIC-0.38□□□□□ -2.47
RNF41Q9H4P4 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.38□□□□□ -2.47
RNF41Q9H4P4 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 RNA5SP98-201ENST00000363158 137 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 MIR451A-201ENST00000385059 72 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 RNU6-644P-201ENST00000391155 98 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 RNU6-65P-201ENST00000516332 98 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 AC103810.7-201ENST00000607821 91 ntBASIC-0.39□□□□□ -2.47
RNF41Q9H4P4 RNU6-132P-201ENST00000383863 107 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 AC244090.1-201ENST00000441884 93 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 AL590491.3-201ENST00000610731 82 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 MIR8064-201ENST00000612863 90 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 AC012531.4-201ENST00000616509 177 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.4□□□□□ -2.47
RNF41Q9H4P4 RNU6-54P-201ENST00000365563 107 ntBASIC-0.41□□□□□ -2.48
RNF41Q9H4P4 RNU6-959P-201ENST00000384671 107 ntBASIC-0.41□□□□□ -2.48
RNF41Q9H4P4 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.41□□□□□ -2.48
RNF41Q9H4P4 MIR4645-201ENST00000583158 77 ntBASIC-0.41□□□□□ -2.48
RNF41Q9H4P4 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.41□□□□□ -2.48
RNF41Q9H4P4 SNORD114-28-201ENST00000363610 72 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 SNORA49-201ENST00000386157 136 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 SNORD4B-201ENST00000459083 72 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 RNU6-795P-201ENST00000516323 103 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 AC145423.2-201ENST00000610631 239 ntBASIC-0.42□□□□□ -2.48
RNF41Q9H4P4 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 RNU6-81P-201ENST00000365608 104 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 SNORD116-21-201ENST00000384507 92 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 RNU6-880P-201ENST00000384526 107 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 RNU6-904P-201ENST00000516206 101 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.43□□□□□ -2.48
RNF41Q9H4P4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.44□□□□□ -2.48
RNF41Q9H4P4 RNU4-36P-201ENST00000364294 144 ntBASIC-0.44□□□□□ -2.48
RNF41Q9H4P4 SNORA19.1-201ENST00000410656 129 ntBASIC-0.44□□□□□ -2.48
RNF41Q9H4P4 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.44□□□□□ -2.48
RNF41Q9H4P4 SNORD42B-201ENST00000458893 67 ntBASIC-0.44□□□□□ -2.48
RNF41Q9H4P4 RNU6-719P-201ENST00000516671 104 ntBASIC-0.44□□□□□ -2.48
RNF41Q9H4P4 MIR3064-201ENST00000581130 66 ntBASIC-0.44□□□□□ -2.48
RNF41Q9H4P4 MIR582-201ENST00000365731 98 ntBASIC-0.45□□□□□ -2.48
RNF41Q9H4P4 MIR9-2-201ENST00000384838 87 ntBASIC-0.45□□□□□ -2.48
RNF41Q9H4P4 AC096531.1-201ENST00000419107 107 ntBASIC-0.45□□□□□ -2.48
RNF41Q9H4P4 MIR6759-201ENST00000638110 65 ntBASIC-0.45□□□□□ -2.48
RNF41Q9H4P4 RNU6-412P-201ENST00000516434 106 ntBASIC-0.46□□□□□ -2.48
RNF41Q9H4P4 RNU6-537P-201ENST00000517277 103 ntBASIC-0.46□□□□□ -2.48
RNF41Q9H4P4 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 SNORA24B-201ENST00000384176 131 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 RNU6-455P-201ENST00000384681 107 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 SCARNA23-201ENST00000516060 130 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 RNU6-762P-201ENST00000517107 102 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 MIR3140-201ENST00000583685 90 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 MIR4263-201ENST00000584745 83 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 MIR4788-201ENST00000639104 80 ntBASIC-0.47□□□□□ -2.48
RNF41Q9H4P4 SNORA63.2-201ENST00000362603 126 ntBASIC-0.48□□□□□ -2.49
RNF41Q9H4P4 SNORD58A-201ENST00000383875 65 ntBASIC-0.48□□□□□ -2.49
RNF41Q9H4P4 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.48□□□□□ -2.49
RNF41Q9H4P4 MIR548E-201ENST00000408287 88 ntBASIC-0.48□□□□□ -2.49
RNF41Q9H4P4 FGF7P7-201ENST00000514120 227 ntBASIC-0.48□□□□□ -2.49
RNF41Q9H4P4 AC104996.3-201ENST00000590718 94 ntBASIC-0.48□□□□□ -2.49
RNF41Q9H4P4 AL365222.1-201ENST00000614661 98 ntBASIC-0.48□□□□□ -2.49
RNF41Q9H4P4 RNU6-495P-201ENST00000362995 107 ntBASIC-0.5□□□□□ -2.49
RNF41Q9H4P4 RNU6-900P-201ENST00000384498 102 ntBASIC-0.5□□□□□ -2.49
RNF41Q9H4P4 MIR548U-201ENST00000390728 81 ntBASIC-0.5□□□□□ -2.49
RNF41Q9H4P4 AC008267.6-201ENST00000441664 139 ntBASIC-0.5□□□□□ -2.49
RNF41Q9H4P4 AP000676.1-201ENST00000533307 52 ntBASIC-0.5□□□□□ -2.49
RNF41Q9H4P4 AP001180.6-201ENST00000584918 159 ntBASIC-0.5□□□□□ -2.49
RNF41Q9H4P4 SNORD114-4-201ENST00000363962 75 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 SNORD14C-201ENST00000365382 88 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 Y_RNA.491-201ENST00000384417 107 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 RNA5SP292-201ENST00000390974 118 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 SNORD90-201ENST00000391145 111 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 RNU6-972P-201ENST00000391208 107 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 RNU6-519P-201ENST00000410590 108 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 Y_RNA.705-201ENST00000516862 110 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 MIR5589-201ENST00000579442 60 ntBASIC-0.51□□□□□ -2.49
RNF41Q9H4P4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.52□□□□□ -2.49
RNF41Q9H4P4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.52□□□□□ -2.49
RNF41Q9H4P4 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-0.52□□□□□ -2.49
RNF41Q9H4P4 RNU7-55P-201ENST00000459426 62 ntBASIC-0.52□□□□□ -2.49
RNF41Q9H4P4 AC097510.1-201ENST00000510945 133 ntBASIC-0.52□□□□□ -2.49
RNF41Q9H4P4 MIR548AZ-201ENST00000616567 95 ntBASIC-0.52□□□□□ -2.49
RNF41Q9H4P4 SNORD115-25-201ENST00000362619 82 ntBASIC-0.53□□□□□ -2.49
RNF41Q9H4P4 RNU6-1051P-201ENST00000365471 102 ntBASIC-0.53□□□□□ -2.49
RNF41Q9H4P4 RNU6-476P-201ENST00000384726 107 ntBASIC-0.53□□□□□ -2.49
RNF41Q9H4P4 SNORA32.3-201ENST00000384772 121 ntBASIC-0.53□□□□□ -2.49
RNF41Q9H4P4 MIR590-201ENST00000385008 97 ntBASIC-0.53□□□□□ -2.49
RNF41Q9H4P4 RNU6-887P-201ENST00000410660 100 ntBASIC-0.53□□□□□ -2.49
RNF41Q9H4P4 SNORD126-201ENST00000459475 77 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 197 ms