Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 U7.7-201ENST00000459276 60 ntBASIC4.42□□□□□ -1.7
CHIC1Q5VXU3 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CHIC1Q5VXU3 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CHIC1Q5VXU3 RNU6-485P-201ENST00000363475 107 ntBASIC4.41□□□□□ -1.7
CHIC1Q5VXU3 MIR196B-201ENST00000384852 84 ntBASIC4.41□□□□□ -1.7
CHIC1Q5VXU3 MIR3678-201ENST00000578455 94 ntBASIC4.41□□□□□ -1.7
CHIC1Q5VXU3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
CHIC1Q5VXU3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
CHIC1Q5VXU3 RNA5SP210-201ENST00000391034 120 ntBASIC4.4□□□□□ -1.71
CHIC1Q5VXU3 AC079804.2-201ENST00000490376 200 ntBASIC4.4□□□□□ -1.71
CHIC1Q5VXU3 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
CHIC1Q5VXU3 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHIC1Q5VXU3 RNU1-40P-201ENST00000516816 164 ntBASIC4.38□□□□□ -1.71
CHIC1Q5VXU3 RNU1-97P-201ENST00000516872 164 ntBASIC4.38□□□□□ -1.71
CHIC1Q5VXU3 MIR6773-201ENST00000612812 74 ntBASIC4.38□□□□□ -1.71
CHIC1Q5VXU3 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
CHIC1Q5VXU3 RNU6-859P-201ENST00000362728 107 ntBASIC4.37□□□□□ -1.71
CHIC1Q5VXU3 AC008413.1-201ENST00000511864 177 ntBASIC4.37□□□□□ -1.71
CHIC1Q5VXU3 MIR4506-201ENST00000584693 77 ntBASIC4.37□□□□□ -1.71
CHIC1Q5VXU3 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CHIC1Q5VXU3 RNA5SP385-201ENST00000515947 110 ntBASIC4.36□□□□□ -1.71
CHIC1Q5VXU3 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CHIC1Q5VXU3 RNU1-78P-201ENST00000391248 165 ntBASIC4.35□□□□□ -1.71
CHIC1Q5VXU3 RNA5SP320-201ENST00000516263 124 ntBASIC4.35□□□□□ -1.71
CHIC1Q5VXU3 SNORA70.22-201ENST00000517160 124 ntBASIC4.35□□□□□ -1.71
CHIC1Q5VXU3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC4.35□□□□□ -1.71
CHIC1Q5VXU3 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC4.33□□□□□ -1.72
CHIC1Q5VXU3 RNU6-530P-201ENST00000391180 107 ntBASIC4.33□□□□□ -1.72
CHIC1Q5VXU3 AC244090.1-201ENST00000441884 93 ntBASIC4.33□□□□□ -1.72
CHIC1Q5VXU3 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC4.33□□□□□ -1.72
CHIC1Q5VXU3 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.33□□□□□ -1.72
CHIC1Q5VXU3 MIR3198-2-201ENST00000577868 80 ntBASIC4.32□□□□□ -1.72
CHIC1Q5VXU3 MIR4422-201ENST00000581938 83 ntBASIC4.32□□□□□ -1.72
CHIC1Q5VXU3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CHIC1Q5VXU3 SNORA67.1-201ENST00000364749 141 ntBASIC4.31□□□□□ -1.72
CHIC1Q5VXU3 SNORD12-201ENST00000391002 90 ntBASIC4.31□□□□□ -1.72
CHIC1Q5VXU3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC4.31□□□□□ -1.72
CHIC1Q5VXU3 MIR4317-201ENST00000637586 65 ntBASIC4.31□□□□□ -1.72
CHIC1Q5VXU3 HDX-206ENST00000506585 6158 ntTSL 2 BASIC4.31□□□□□ -1.72
CHIC1Q5VXU3 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CHIC1Q5VXU3 SNORD105-201ENST00000386910 85 ntBASIC4.3□□□□□ -1.72
CHIC1Q5VXU3 RNU6-1223P-201ENST00000517124 104 ntBASIC4.3□□□□□ -1.72
CHIC1Q5VXU3 MIR20A-201ENST00000362279 71 ntBASIC4.29□□□□□ -1.72
CHIC1Q5VXU3 RNU6-1110P-201ENST00000516462 101 ntBASIC4.29□□□□□ -1.72
CHIC1Q5VXU3 WARS-244ENST00000627608 123 ntTSL 5 BASIC4.29□□□□□ -1.72
CHIC1Q5VXU3 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CHIC1Q5VXU3 SNORD89-201ENST00000390981 114 ntBASIC4.27□□□□□ -1.73
CHIC1Q5VXU3 RNA5SP68-201ENST00000363885 119 ntBASIC4.26□□□□□ -1.73
CHIC1Q5VXU3 MIR27B-201ENST00000385129 97 ntBASIC4.26□□□□□ -1.73
CHIC1Q5VXU3 AL354695.1-201ENST00000427935 228 ntBASIC4.26□□□□□ -1.73
CHIC1Q5VXU3 RNA5SP227-201ENST00000516184 113 ntBASIC4.26□□□□□ -1.73
CHIC1Q5VXU3 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC4.25□□□□□ -1.73
CHIC1Q5VXU3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
CHIC1Q5VXU3 SNORA26.9-201ENST00000391322 122 ntBASIC4.25□□□□□ -1.73
CHIC1Q5VXU3 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CHIC1Q5VXU3 RNA5SP456-201ENST00000364002 114 ntBASIC4.24□□□□□ -1.73
CHIC1Q5VXU3 RNY1P8-201ENST00000383970 114 ntBASIC4.24□□□□□ -1.73
CHIC1Q5VXU3 SNORD2-201ENST00000459163 69 ntBASIC4.24□□□□□ -1.73
CHIC1Q5VXU3 RNA5SP148-201ENST00000516527 94 ntBASIC4.24□□□□□ -1.73
CHIC1Q5VXU3 MIR6817-201ENST00000615588 66 ntBASIC4.24□□□□□ -1.73
CHIC1Q5VXU3 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CHIC1Q5VXU3 RN7SL499P-201ENST00000481141 276 ntBASIC4.23□□□□□ -1.73
CHIC1Q5VXU3 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
CHIC1Q5VXU3 MIR887-201ENST00000401258 79 ntBASIC4.22□□□□□ -1.73
CHIC1Q5VXU3 MIR5092-201ENST00000583139 88 ntBASIC4.22□□□□□ -1.73
CHIC1Q5VXU3 MIRLET7B-201ENST00000385140 83 ntBASIC4.21□□□□□ -1.74
CHIC1Q5VXU3 MIR6828-201ENST00000636181 60 ntBASIC4.21□□□□□ -1.74
CHIC1Q5VXU3 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC4.19□□□□□ -1.74
CHIC1Q5VXU3 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
CHIC1Q5VXU3 SNORD63.2-201ENST00000516303 64 ntBASIC4.19□□□□□ -1.74
CHIC1Q5VXU3 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC4.19□□□□□ -1.74
CHIC1Q5VXU3 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
CHIC1Q5VXU3 MIR222-201ENST00000384992 110 ntBASIC4.18□□□□□ -1.74
CHIC1Q5VXU3 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
CHIC1Q5VXU3 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
CHIC1Q5VXU3 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
CHIC1Q5VXU3 MIR3612-201ENST00000579753 87 ntBASIC4.17□□□□□ -1.74
CHIC1Q5VXU3 MIR7843-201ENST00000622274 79 ntBASIC4.17□□□□□ -1.74
CHIC1Q5VXU3 MTRNR2L9-201ENST00000622562 75 ntBASIC4.17□□□□□ -1.74
CHIC1Q5VXU3 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
CHIC1Q5VXU3 MIR21-201ENST00000362134 72 ntBASIC4.16□□□□□ -1.74
CHIC1Q5VXU3 SNORD114-30-201ENST00000364448 72 ntBASIC4.16□□□□□ -1.74
CHIC1Q5VXU3 MIR17-201ENST00000385012 84 ntBASIC4.15□□□□□ -1.75
CHIC1Q5VXU3 MIR6507-201ENST00000613630 70 ntBASIC4.15□□□□□ -1.75
CHIC1Q5VXU3 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
CHIC1Q5VXU3 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
CHIC1Q5VXU3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC4.14□□□□□ -1.75
CHIC1Q5VXU3 SNORD57-201ENST00000448188 72 ntBASIC4.14□□□□□ -1.75
CHIC1Q5VXU3 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC4.13□□□□□ -1.75
CHIC1Q5VXU3 SNORA70B-201ENST00000384210 135 ntBASIC4.13□□□□□ -1.75
CHIC1Q5VXU3 AC002429.1-201ENST00000437672 148 ntBASIC4.13□□□□□ -1.75
CHIC1Q5VXU3 RNU6-1047P-201ENST00000364418 107 ntBASIC4.12□□□□□ -1.75
CHIC1Q5VXU3 FABP5P4-201ENST00000437203 171 ntBASIC4.12□□□□□ -1.75
CHIC1Q5VXU3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
CHIC1Q5VXU3 MIR573-201ENST00000384964 99 ntBASIC4.11□□□□□ -1.75
CHIC1Q5VXU3 RNA5SP289-201ENST00000362332 137 ntBASIC4.1□□□□□ -1.75
CHIC1Q5VXU3 RNU6-782P-201ENST00000516852 104 ntBASIC4.1□□□□□ -1.75
CHIC1Q5VXU3 AL353803.5-201ENST00000599815 141 ntBASIC4.1□□□□□ -1.75
CHIC1Q5VXU3 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CHIC1Q5VXU3 SNORA49-201ENST00000386157 136 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 195.2 ms