Protein–RNA interactions for Protein: P39060

COL18A1, Collagen alpha-1(XVIII) chain, humanhuman

Predictions only

Length 1,754 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1P39060 Y_RNA.396-201ENST00000383949 103 ntBASIC-1.03□□□□□ -2.57
COL18A1P39060 MT-TI-201ENST00000387365 69 ntBASIC-1.03□□□□□ -2.57
COL18A1P39060 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-1.03□□□□□ -2.57
COL18A1P39060 RNU6-935P-201ENST00000410371 100 ntBASIC-1.03□□□□□ -2.57
COL18A1P39060 RNU2-38P-201ENST00000410856 79 ntBASIC-1.03□□□□□ -2.57
COL18A1P39060 RNA5SP136-201ENST00000410906 107 ntBASIC-1.03□□□□□ -2.57
COL18A1P39060 AP000533.3-201ENST00000447704 118 ntBASIC-1.03□□□□□ -2.57
COL18A1P39060 AP002392.1-201ENST00000537692 208 ntBASIC-1.03□□□□□ -2.57
COL18A1P39060 Y_RNA.12-201ENST00000362393 112 ntBASIC-1.03□□□□□ -2.58
COL18A1P39060 Y_RNA.61-201ENST00000362835 102 ntBASIC-1.03□□□□□ -2.58
COL18A1P39060 AC140658.3-201ENST00000567603 271 ntBASIC-1.03□□□□□ -2.58
COL18A1P39060 Y_RNA.189-201ENST00000363959 112 ntBASIC-1.04□□□□□ -2.58
COL18A1P39060 RNU6-409P-201ENST00000384114 104 ntBASIC-1.04□□□□□ -2.58
COL18A1P39060 RNU6-540P-201ENST00000384622 101 ntBASIC-1.04□□□□□ -2.58
COL18A1P39060 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.04□□□□□ -2.58
COL18A1P39060 SCARNA18B-201ENST00000458806 135 ntBASIC-1.04□□□□□ -2.58
COL18A1P39060 MTATP8P1-201ENST00000467115 207 ntBASIC-1.04□□□□□ -2.58
COL18A1P39060 Y_RNA.701-201ENST00000516812 110 ntBASIC-1.04□□□□□ -2.58
COL18A1P39060 U4.1-201ENST00000620349 87 ntBASIC-1.04□□□□□ -2.58
COL18A1P39060 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 Y_RNA.478-201ENST00000384358 107 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 Y_RNA.507-201ENST00000384500 99 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 MIR124-2-201ENST00000385081 109 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 MIR517B-201ENST00000385102 67 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 MIR548E-201ENST00000408287 88 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 RNU6-1271P-201ENST00000517049 105 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 Y_RNA.720-201ENST00000517166 92 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 AC130289.1-201ENST00000577321 73 ntBASIC-1.05□□□□□ -2.58
COL18A1P39060 MTCYBP6-201ENST00000441810 138 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 MIR6129-201ENST00000616087 109 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 Y_RNA.47-201ENST00000362697 108 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 Y_RNA.283-201ENST00000364798 112 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 Y_RNA.401-201ENST00000383965 117 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 SNORD18.2-201ENST00000459604 70 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 RNU6-762P-201ENST00000517107 102 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 MIR4536-1-201ENST00000583537 88 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 AL442128.1-201ENST00000615151 90 ntBASIC-1.06□□□□□ -2.58
COL18A1P39060 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.07□□□□□ -2.58
COL18A1P39060 Y_RNA.155-201ENST00000363632 101 ntBASIC-1.07□□□□□ -2.58
COL18A1P39060 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.07□□□□□ -2.58
COL18A1P39060 RNU6-54P-201ENST00000365563 107 ntBASIC-1.07□□□□□ -2.58
COL18A1P39060 MIR5704-201ENST00000584029 77 ntBASIC-1.07□□□□□ -2.58
COL18A1P39060 MIR451A-201ENST00000385059 72 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 RNU6-719P-201ENST00000516671 104 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 RNU6-1020P-201ENST00000363684 107 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 Y_RNA.233-201ENST00000364407 101 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 RNU6-1250P-201ENST00000391218 107 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 AL445584.3-201ENST00000617173 78 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 MIR8068-201ENST00000618032 68 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.08□□□□□ -2.58
COL18A1P39060 RNU6-647P-201ENST00000364243 107 ntBASIC-1.09□□□□□ -2.58
COL18A1P39060 RNU6-1227P-201ENST00000383981 107 ntBASIC-1.09□□□□□ -2.58
COL18A1P39060 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.09□□□□□ -2.58
COL18A1P39060 MIR548D2-201ENST00000384955 97 ntBASIC-1.09□□□□□ -2.58
COL18A1P39060 RNU6-65P-201ENST00000516332 98 ntBASIC-1.09□□□□□ -2.58
COL18A1P39060 RNU6-118P-201ENST00000516552 102 ntBASIC-1.09□□□□□ -2.58
COL18A1P39060 Y_RNA.200-201ENST00000364018 102 ntBASIC-1.1□□□□□ -2.59
COL18A1P39060 RNU6-1219P-201ENST00000516143 112 ntBASIC-1.1□□□□□ -2.59
COL18A1P39060 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC-1.1□□□□□ -2.59
COL18A1P39060 RNY1P11-201ENST00000363759 113 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 Y_RNA.350-201ENST00000365409 98 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 MIR582-201ENST00000365731 98 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 SNORD64-201ENST00000386683 67 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 MIR1263-201ENST00000408324 86 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 MIR6773-201ENST00000612812 74 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 SNORA62.4-201ENST00000365504 151 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 MIR548F4-201ENST00000408515 105 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 SNORD42B-201ENST00000458893 67 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 MIR3658-201ENST00000636291 56 ntBASIC-1.11□□□□□ -2.59
COL18A1P39060 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.12□□□□□ -2.59
COL18A1P39060 AL117187.1-201ENST00000555482 181 ntBASIC-1.12□□□□□ -2.59
COL18A1P39060 YWHAEP3-201ENST00000582767 121 ntBASIC-1.12□□□□□ -2.59
COL18A1P39060 Y_RNA.149-201ENST00000363558 117 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 SNORA20.1-201ENST00000364790 130 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 Y_RNA.528-201ENST00000384575 108 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 Y_RNA.186-201ENST00000363899 92 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 AL353813.1-201ENST00000440700 253 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 RNU6-75P-201ENST00000515944 104 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 RNU6-1121P-201ENST00000516802 109 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 MIR3128-201ENST00000581957 66 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 AC008737.2-201ENST00000599446 118 ntBASIC-1.13□□□□□ -2.59
COL18A1P39060 MIRLET7B-201ENST00000385140 83 ntBASIC-1.14□□□□□ -2.59
COL18A1P39060 RNU6-337P-201ENST00000391243 106 ntBASIC-1.14□□□□□ -2.59
COL18A1P39060 AC097510.1-201ENST00000510945 133 ntBASIC-1.14□□□□□ -2.59
COL18A1P39060 MIR382-201ENST00000637119 76 ntBASIC-1.14□□□□□ -2.59
COL18A1P39060 RNU6-495P-201ENST00000362995 107 ntBASIC-1.15□□□□□ -2.59
COL18A1P39060 RNU6-867P-201ENST00000364956 107 ntBASIC-1.15□□□□□ -2.59
COL18A1P39060 RNU6-905P-201ENST00000384434 107 ntBASIC-1.15□□□□□ -2.59
COL18A1P39060 AC072026.1-201ENST00000605023 201 ntBASIC-1.15□□□□□ -2.59
COL18A1P39060 RNU6-431P-201ENST00000383874 107 ntBASIC-1.16□□□□□ -2.59
COL18A1P39060 RNU6-1135P-201ENST00000411083 103 ntBASIC-1.16□□□□□ -2.59
COL18A1P39060 ZNRD1-AS1_1.6-201ENST00000610339 68 ntBASIC-1.16□□□□□ -2.59
COL18A1P39060 Y_RNA.163-201ENST00000363702 113 ntBASIC-1.16□□□□□ -2.6
COL18A1P39060 SNORD50.2-201ENST00000365465 70 ntBASIC-1.16□□□□□ -2.6
COL18A1P39060 RNU6-592P-201ENST00000411333 103 ntBASIC-1.16□□□□□ -2.6
COL18A1P39060 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.16□□□□□ -2.6
Retrieved 100 of 98,524 protein–RNA pairs in 186.3 ms