Protein–RNA interactions for Protein: P03956

MMP1, Interstitial collagenase, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP1P03956 Y_RNA.407-201ENST00000383986 113 ntBASIC-0.24□□□□□ -2.45
MMP1P03956 RNU6-935P-201ENST00000410371 100 ntBASIC-0.24□□□□□ -2.45
MMP1P03956 AC244250.2-201ENST00000418731 148 ntBASIC-0.24□□□□□ -2.45
MMP1P03956 SNORD4A-201ENST00000459174 72 ntBASIC-0.24□□□□□ -2.45
MMP1P03956 MIR548Z-201ENST00000584743 97 ntBASIC-0.24□□□□□ -2.45
MMP1P03956 Y_RNA.95-201ENST00000363079 95 ntBASIC-0.25□□□□□ -2.45
MMP1P03956 SNORA18.1-201ENST00000363418 128 ntBASIC-0.25□□□□□ -2.45
MMP1P03956 RNU6-1062P-201ENST00000383908 107 ntBASIC-0.25□□□□□ -2.45
MMP1P03956 Y_RNA.563-201ENST00000384707 108 ntBASIC-0.25□□□□□ -2.45
MMP1P03956 MIR4645-201ENST00000583158 77 ntBASIC-0.25□□□□□ -2.45
MMP1P03956 MIR4439-201ENST00000583746 80 ntBASIC-0.25□□□□□ -2.45
MMP1P03956 SNORD114-12-201ENST00000365400 75 ntBASIC-0.26□□□□□ -2.45
MMP1P03956 Y_RNA.467-201ENST00000384297 102 ntBASIC-0.26□□□□□ -2.45
MMP1P03956 MIR652-201ENST00000385278 98 ntBASIC-0.26□□□□□ -2.45
MMP1P03956 MIR4777-201ENST00000583710 86 ntBASIC-0.26□□□□□ -2.45
MMP1P03956 MIRLET7F1-201ENST00000362202 87 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 SNORD45B-201ENST00000364617 72 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 RNA5SP205-201ENST00000364653 136 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 SNORD114-29-201ENST00000364819 70 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 SNORD49B-201ENST00000365172 72 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 MIR604-201ENST00000384880 94 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 MIR451A-201ENST00000385059 72 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 snoU13.19-201ENST00000459148 104 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 RNU6-1333P-201ENST00000516162 93 ntBASIC-0.27□□□□□ -2.45
MMP1P03956 Y_RNA.261-201ENST00000364631 102 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 SNORD114-15-201ENST00000364687 72 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 RNY4P3-201ENST00000365254 95 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 RNU6-132P-201ENST00000383863 107 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 RNU6-1014P-201ENST00000383940 103 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 RNU6-811P-201ENST00000384069 107 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 Y_RNA.437-201ENST00000384113 113 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 RNU6-813P-201ENST00000384691 107 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 SNORA19.1-201ENST00000410656 129 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 AC103810.7-201ENST00000607821 91 ntBASIC-0.28□□□□□ -2.45
MMP1P03956 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-0.28□□□□□ -2.45
MMP1P03956 Y_RNA.239-201ENST00000364444 113 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 RNU6-54P-201ENST00000365563 107 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 SNORD116-21-201ENST00000384507 92 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 RNU6-880P-201ENST00000384526 107 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 RNU6-959P-201ENST00000384671 107 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 MIR216B-201ENST00000390186 82 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 RNU6-644P-201ENST00000391155 98 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 RNU6-795P-201ENST00000516323 103 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 RNU6-65P-201ENST00000516332 98 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 RNU6-1057P-201ENST00000517162 102 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 MIR4536-1-201ENST00000583537 88 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 AC012531.4-201ENST00000616509 177 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 AL627230.5-201ENST00000619807 58 ntBASIC-0.29□□□□□ -2.46
MMP1P03956 MIR101-1-201ENST00000362265 75 ntBASIC-0.3□□□□□ -2.46
MMP1P03956 RNU6-1107P-201ENST00000364817 104 ntBASIC-0.3□□□□□ -2.46
MMP1P03956 SNORA49-201ENST00000386157 136 ntBASIC-0.3□□□□□ -2.46
MMP1P03956 Y_RNA.601-201ENST00000410500 113 ntBASIC-0.3□□□□□ -2.46
MMP1P03956 Y_RNA.677-201ENST00000516401 85 ntBASIC-0.3□□□□□ -2.46
MMP1P03956 DLEU2_3.1-201ENST00000620005 73 ntBASIC-0.3□□□□□ -2.46
MMP1P03956 MIR20A-201ENST00000362279 71 ntBASIC-0.31□□□□□ -2.46
MMP1P03956 RNA5SP368-201ENST00000364298 116 ntBASIC-0.31□□□□□ -2.46
MMP1P03956 RNU6-1036P-201ENST00000383959 104 ntBASIC-0.31□□□□□ -2.46
MMP1P03956 SNORD4B-201ENST00000459083 72 ntBASIC-0.31□□□□□ -2.46
MMP1P03956 RNU6-904P-201ENST00000516206 101 ntBASIC-0.31□□□□□ -2.46
MMP1P03956 AC108676.2-201ENST00000605225 163 ntBASIC-0.31□□□□□ -2.46
MMP1P03956 MIR3666-201ENST00000607845 111 ntBASIC-0.31□□□□□ -2.46
MMP1P03956 Y_RNA.10-201ENST00000362371 110 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 RNU4-36P-201ENST00000364294 144 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 RNU6-81P-201ENST00000365608 104 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 MIR582-201ENST00000365731 98 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 RNU6-1144P-201ENST00000384247 104 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 RNA5SP300-201ENST00000391197 107 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 U3.27-201ENST00000391237 200 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 AC244090.1-201ENST00000441884 93 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 SNORD42B-201ENST00000458893 67 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 SCARNA17.3-201ENST00000516381 125 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 MIR3064-201ENST00000581130 66 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 AC145423.2-201ENST00000610631 239 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 AL590491.3-201ENST00000610731 82 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 AL365222.1-201ENST00000614661 98 ntBASIC-0.32□□□□□ -2.46
MMP1P03956 RNU6-1052P-201ENST00000411398 104 ntBASIC-0.33□□□□□ -2.46
MMP1P03956 RNU6-719P-201ENST00000516671 104 ntBASIC-0.33□□□□□ -2.46
MMP1P03956 RNU6-537P-201ENST00000517277 103 ntBASIC-0.33□□□□□ -2.46
MMP1P03956 SNORD114-28-201ENST00000363610 72 ntBASIC-0.34□□□□□ -2.46
MMP1P03956 SNORD95.1-201ENST00000364099 68 ntBASIC-0.34□□□□□ -2.46
MMP1P03956 RNU6-412P-201ENST00000516434 106 ntBASIC-0.34□□□□□ -2.46
MMP1P03956 RNU6-762P-201ENST00000517107 102 ntBASIC-0.34□□□□□ -2.46
MMP1P03956 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC-0.34□□□□□ -2.46
MMP1P03956 MIR9-2-201ENST00000384838 87 ntBASIC-0.35□□□□□ -2.47
MMP1P03956 IL6ST-207ENST00000396816 168 ntTSL 1 (best) BASIC-0.35□□□□□ -2.47
MMP1P03956 FGF7P7-201ENST00000514120 227 ntBASIC-0.35□□□□□ -2.47
MMP1P03956 SCARNA23-201ENST00000516060 130 ntBASIC-0.35□□□□□ -2.47
MMP1P03956 MIR3140-201ENST00000583685 90 ntBASIC-0.35□□□□□ -2.47
MMP1P03956 AC104996.3-201ENST00000590718 94 ntBASIC-0.35□□□□□ -2.47
MMP1P03956 SNORA24B-201ENST00000384176 131 ntBASIC-0.36□□□□□ -2.47
MMP1P03956 RNU6-455P-201ENST00000384681 107 ntBASIC-0.36□□□□□ -2.47
MMP1P03956 MIR548E-201ENST00000408287 88 ntBASIC-0.36□□□□□ -2.47
MMP1P03956 AC008267.6-201ENST00000441664 139 ntBASIC-0.36□□□□□ -2.47
MMP1P03956 AC097510.1-201ENST00000510945 133 ntBASIC-0.36□□□□□ -2.47
MMP1P03956 SNORA63.2-201ENST00000362603 126 ntBASIC-0.37□□□□□ -2.47
MMP1P03956 SNORD58A-201ENST00000383875 65 ntBASIC-0.37□□□□□ -2.47
MMP1P03956 RNU6-476P-201ENST00000384726 107 ntBASIC-0.37□□□□□ -2.47
MMP1P03956 MIR548U-201ENST00000390728 81 ntBASIC-0.37□□□□□ -2.47
MMP1P03956 RNA5SP292-201ENST00000390974 118 ntBASIC-0.37□□□□□ -2.47
MMP1P03956 SNORD90-201ENST00000391145 111 ntBASIC-0.37□□□□□ -2.47
Retrieved 100 of 98,524 protein–RNA pairs in 182.9 ms