Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 RNU6-380P-201ENST00000410207 107 ntBASIC1.6□□□□□ -2.15
RTN4Q9NQC3 SNORA63.2-201ENST00000362603 126 ntBASIC1.59□□□□□ -2.15
RTN4Q9NQC3 PSMC1P5-201ENST00000512850 177 ntBASIC1.59□□□□□ -2.15
RTN4Q9NQC3 AC092634.7-201ENST00000621022 103 ntBASIC1.59□□□□□ -2.15
RTN4Q9NQC3 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.58□□□□□ -2.16
RTN4Q9NQC3 RNU6-1051P-201ENST00000365471 102 ntBASIC1.58□□□□□ -2.16
RTN4Q9NQC3 RNU6-716P-201ENST00000365621 103 ntBASIC1.58□□□□□ -2.16
RTN4Q9NQC3 SNORA17.3-201ENST00000391159 129 ntBASIC1.58□□□□□ -2.16
RTN4Q9NQC3 MIR4666B-201ENST00000578142 81 ntBASIC1.58□□□□□ -2.16
RTN4Q9NQC3 AL590095.2-201ENST00000604136 117 ntBASIC1.58□□□□□ -2.16
RTN4Q9NQC3 AL354695.1-201ENST00000427935 228 ntBASIC1.57□□□□□ -2.16
RTN4Q9NQC3 SNORD13-201ENST00000459299 104 ntBASIC1.57□□□□□ -2.16
RTN4Q9NQC3 SNORD53B-201ENST00000577887 78 ntBASIC1.57□□□□□ -2.16
RTN4Q9NQC3 AC073869.9-201ENST00000641610 120 ntBASIC1.57□□□□□ -2.16
RTN4Q9NQC3 SNORA8.2-201ENST00000384372 139 ntBASIC1.56□□□□□ -2.16
RTN4Q9NQC3 SNORD71-201ENST00000411292 86 ntBASIC1.56□□□□□ -2.16
RTN4Q9NQC3 RNU6-624P-201ENST00000363411 107 ntBASIC1.55□□□□□ -2.16
RTN4Q9NQC3 SNORA67.5-201ENST00000391036 107 ntBASIC1.55□□□□□ -2.16
RTN4Q9NQC3 RNU6-1053P-201ENST00000515930 101 ntBASIC1.55□□□□□ -2.16
RTN4Q9NQC3 RNU6-557P-201ENST00000516842 110 ntBASIC1.55□□□□□ -2.16
RTN4Q9NQC3 MIR4653-201ENST00000585107 83 ntBASIC1.55□□□□□ -2.16
RTN4Q9NQC3 RNU6-592P-201ENST00000411333 103 ntBASIC1.54□□□□□ -2.16
RTN4Q9NQC3 AC108667.1-201ENST00000428618 249 ntBASIC1.54□□□□□ -2.16
RTN4Q9NQC3 AL603825.1-201ENST00000438481 80 ntBASIC1.54□□□□□ -2.16
RTN4Q9NQC3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.54□□□□□ -2.16
RTN4Q9NQC3 MIR378A-201ENST00000362177 66 ntBASIC1.53□□□□□ -2.16
RTN4Q9NQC3 MIR1285-1-201ENST00000408593 84 ntBASIC1.53□□□□□ -2.16
RTN4Q9NQC3 SNORA31.24-201ENST00000517232 57 ntBASIC1.53□□□□□ -2.16
RTN4Q9NQC3 MIR519E-201ENST00000385075 84 ntBASIC1.52□□□□□ -2.17
RTN4Q9NQC3 RNU6-129P-201ENST00000391022 107 ntBASIC1.52□□□□□ -2.17
RTN4Q9NQC3 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
RTN4Q9NQC3 RNA5SP247-201ENST00000411181 105 ntBASIC1.52□□□□□ -2.17
RTN4Q9NQC3 SNORA36.1-201ENST00000363424 132 ntBASIC1.51□□□□□ -2.17
RTN4Q9NQC3 Y_RNA.437-201ENST00000384113 113 ntBASIC1.51□□□□□ -2.17
RTN4Q9NQC3 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
RTN4Q9NQC3 AC004223.1-201ENST00000479840 271 ntBASIC1.51□□□□□ -2.17
RTN4Q9NQC3 AL162376.1-201ENST00000624117 175 ntBASIC1.51□□□□□ -2.17
RTN4Q9NQC3 MIR337-201ENST00000362281 93 ntBASIC1.5□□□□□ -2.17
RTN4Q9NQC3 SNORD77.2-201ENST00000391045 68 ntBASIC1.5□□□□□ -2.17
RTN4Q9NQC3 AL450471.1-201ENST00000447509 127 ntBASIC1.5□□□□□ -2.17
RTN4Q9NQC3 MIR548AG2-201ENST00000581228 64 ntBASIC1.5□□□□□ -2.17
RTN4Q9NQC3 SNORA40.8-201ENST00000411034 126 ntBASIC1.49□□□□□ -2.17
RTN4Q9NQC3 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
RTN4Q9NQC3 RNU6-1187P-201ENST00000364771 110 ntBASIC1.48□□□□□ -2.17
RTN4Q9NQC3 RNU6-573P-201ENST00000383938 106 ntBASIC1.48□□□□□ -2.17
RTN4Q9NQC3 LINC00643-201ENST00000334389 3247 ntTSL 2 BASIC1.47□□□□□ -2.17
RTN4Q9NQC3 RNU6-315P-201ENST00000362666 107 ntBASIC1.47□□□□□ -2.17
RTN4Q9NQC3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC1.46□□□□□ -2.18
RTN4Q9NQC3 MIR1245B-201ENST00000636115 69 ntBASIC1.46□□□□□ -2.18
RTN4Q9NQC3 RNU6-208P-201ENST00000362431 107 ntBASIC1.45□□□□□ -2.18
RTN4Q9NQC3 Y_RNA.316-201ENST00000365118 111 ntBASIC1.45□□□□□ -2.18
RTN4Q9NQC3 RNA5SP517-201ENST00000364724 117 ntBASIC1.44□□□□□ -2.18
RTN4Q9NQC3 RPL39P28-201ENST00000465655 155 ntBASIC1.44□□□□□ -2.18
RTN4Q9NQC3 MIR7107-201ENST00000611489 80 ntBASIC1.44□□□□□ -2.18
RTN4Q9NQC3 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
RTN4Q9NQC3 SNORD78.1-201ENST00000390866 65 ntBASIC1.43□□□□□ -2.18
RTN4Q9NQC3 MIR4498-201ENST00000577599 66 ntBASIC1.43□□□□□ -2.18
RTN4Q9NQC3 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.43□□□□□ -2.18
RTN4Q9NQC3 RNU6-686P-201ENST00000364839 107 ntBASIC1.42□□□□□ -2.18
RTN4Q9NQC3 RNU6-269P-201ENST00000391077 97 ntBASIC1.42□□□□□ -2.18
RTN4Q9NQC3 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
RTN4Q9NQC3 TRMT112P2-201ENST00000512910 132 ntBASIC1.42□□□□□ -2.18
RTN4Q9NQC3 MIR4460-201ENST00000577862 86 ntBASIC1.42□□□□□ -2.18
RTN4Q9NQC3 MIR4303-201ENST00000581299 66 ntBASIC1.42□□□□□ -2.18
RTN4Q9NQC3 snoU13.31-201ENST00000607291 104 ntBASIC1.42□□□□□ -2.18
RTN4Q9NQC3 RNU1-141P-201ENST00000364623 158 ntBASIC1.41□□□□□ -2.18
RTN4Q9NQC3 RNU6-652P-201ENST00000365488 107 ntBASIC1.41□□□□□ -2.18
RTN4Q9NQC3 RNU6-1275P-201ENST00000391087 107 ntBASIC1.41□□□□□ -2.18
RTN4Q9NQC3 RNU2-59P-201ENST00000410482 191 ntBASIC1.41□□□□□ -2.18
RTN4Q9NQC3 RNU6-787P-201ENST00000384032 107 ntBASIC1.4□□□□□ -2.19
RTN4Q9NQC3 AC097510.1-201ENST00000510945 133 ntBASIC1.4□□□□□ -2.19
RTN4Q9NQC3 RNU6-863P-201ENST00000515989 104 ntBASIC1.4□□□□□ -2.19
RTN4Q9NQC3 Y_RNA.685-201ENST00000516532 108 ntBASIC1.4□□□□□ -2.19
RTN4Q9NQC3 AC018659.1-201ENST00000551083 169 ntBASIC1.4□□□□□ -2.19
RTN4Q9NQC3 RNU6-681P-201ENST00000364012 104 ntBASIC1.39□□□□□ -2.19
RTN4Q9NQC3 SNORD118-201ENST00000363593 134 ntBASIC1.38□□□□□ -2.19
RTN4Q9NQC3 RNY1P8-201ENST00000383970 114 ntBASIC1.38□□□□□ -2.19
RTN4Q9NQC3 RNU6-1124P-201ENST00000384169 107 ntBASIC1.38□□□□□ -2.19
RTN4Q9NQC3 MIR1287-201ENST00000408492 90 ntBASIC1.38□□□□□ -2.19
RTN4Q9NQC3 MIR548O2-201ENST00000616090 70 ntBASIC1.38□□□□□ -2.19
RTN4Q9NQC3 RNU6-228P-201ENST00000362700 106 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 AC093423.1-201ENST00000440817 142 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 RNU6-848P-201ENST00000515948 107 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 RNU6-617P-201ENST00000516147 107 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 RNU6-473P-201ENST00000516164 107 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 RNU6-1049P-201ENST00000516414 107 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 MIR5706-201ENST00000579841 80 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 MIR3660-201ENST00000584845 100 ntBASIC1.37□□□□□ -2.19
RTN4Q9NQC3 Y_RNA.118-201ENST00000363300 101 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 MIR518A1-201ENST00000385068 85 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 RNU6-1177P-201ENST00000391058 104 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 SNORA40.6-201ENST00000391153 128 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 AP1B1P2-201ENST00000416196 106 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 MIR3140-201ENST00000583685 90 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 U7.6-201ENST00000610841 64 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 AC069503.3-201ENST00000618674 145 ntBASIC1.36□□□□□ -2.19
RTN4Q9NQC3 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
RTN4Q9NQC3 RNU6-1094P-201ENST00000362416 104 ntBASIC1.35□□□□□ -2.19
RTN4Q9NQC3 Y_RNA.226-201ENST00000364337 114 ntBASIC1.35□□□□□ -2.19
RTN4Q9NQC3 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 9.6 ms