Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-300P-201ENST00000459080 104 ntBASIC3.08□□□□□ -1.92
RNF39Q9H2S5 7SK.11-201ENST00000615477 250 ntBASIC3.08□□□□□ -1.92
RNF39Q9H2S5 MAPK10-266ENST00000641066 6555 ntBASIC3.08□□□□□ -1.92
RNF39Q9H2S5 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
RNF39Q9H2S5 SNORD110-201ENST00000408189 75 ntBASIC3.07□□□□□ -1.92
RNF39Q9H2S5 AC107016.2-201ENST00000547968 190 ntBASIC3.07□□□□□ -1.92
RNF39Q9H2S5 MIR4287-201ENST00000579398 78 ntBASIC3.07□□□□□ -1.92
RNF39Q9H2S5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.07□□□□□ -1.92
RNF39Q9H2S5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RNF39Q9H2S5 MIR20A-201ENST00000362279 71 ntBASIC3.06□□□□□ -1.92
RNF39Q9H2S5 RN7SL330P-201ENST00000469709 307 ntBASIC3.06□□□□□ -1.92
RNF39Q9H2S5 AC104984.5-201ENST00000586878 94 ntBASIC3.06□□□□□ -1.92
RNF39Q9H2S5 U6.98-201ENST00000637157 84 ntBASIC3.06□□□□□ -1.92
RNF39Q9H2S5 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RNF39Q9H2S5 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
RNF39Q9H2S5 MIR148B-201ENST00000362252 99 ntBASIC3.05□□□□□ -1.92
RNF39Q9H2S5 UQCRHP3-201ENST00000451503 251 ntBASIC3.05□□□□□ -1.92
RNF39Q9H2S5 SNORD63.1-201ENST00000516178 80 ntBASIC3.05□□□□□ -1.92
RNF39Q9H2S5 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC3.04□□□□□ -1.92
RNF39Q9H2S5 RNU6-805P-201ENST00000365643 106 ntBASIC3.04□□□□□ -1.92
RNF39Q9H2S5 AL138827.1-201ENST00000402666 306 ntBASIC3.04□□□□□ -1.92
RNF39Q9H2S5 MIR3162-201ENST00000581818 82 ntBASIC3.04□□□□□ -1.92
RNF39Q9H2S5 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF39Q9H2S5 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.03□□□□□ -1.92
RNF39Q9H2S5 RNY1P8-201ENST00000383970 114 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 MIRLET7B-201ENST00000385140 83 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 RNA5SP184-201ENST00000411071 108 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 SNORD109B-201ENST00000458961 67 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 SNORD109A-201ENST00000459128 67 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 RNU7-21P-201ENST00000459430 62 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 SCARNA16.5-201ENST00000517114 183 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 MIR3170-201ENST00000582699 77 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 MIR8074-201ENST00000615081 81 ntBASIC3.03□□□□□ -1.92
RNF39Q9H2S5 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF39Q9H2S5 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.02□□□□□ -1.93
RNF39Q9H2S5 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.02□□□□□ -1.93
RNF39Q9H2S5 RNU6-1065P-201ENST00000384513 106 ntBASIC3.02□□□□□ -1.93
RNF39Q9H2S5 MIR1827-201ENST00000408549 66 ntBASIC3.02□□□□□ -1.93
RNF39Q9H2S5 RNA5SP293-201ENST00000410527 113 ntBASIC3.02□□□□□ -1.93
RNF39Q9H2S5 RNU6-1110P-201ENST00000516462 101 ntBASIC3.02□□□□□ -1.93
RNF39Q9H2S5 MIR4658-201ENST00000584344 65 ntBASIC3.02□□□□□ -1.93
RNF39Q9H2S5 MIR6715A-201ENST00000615929 79 ntBASIC3.02□□□□□ -1.93
RNF39Q9H2S5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
RNF39Q9H2S5 Z96811.1-201ENST00000445880 108 ntBASIC3.01□□□□□ -1.93
RNF39Q9H2S5 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
RNF39Q9H2S5 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.01□□□□□ -1.93
RNF39Q9H2S5 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3□□□□□ -1.93
RNF39Q9H2S5 MIR512-1-201ENST00000384913 84 ntBASIC3□□□□□ -1.93
RNF39Q9H2S5 RNA5SP212-201ENST00000391223 107 ntBASIC3□□□□□ -1.93
RNF39Q9H2S5 MIR1468-201ENST00000410600 86 ntBASIC3□□□□□ -1.93
RNF39Q9H2S5 U7.7-201ENST00000459276 60 ntBASIC3□□□□□ -1.93
RNF39Q9H2S5 SNORA31.25-201ENST00000517242 134 ntBASIC3□□□□□ -1.93
RNF39Q9H2S5 MIR3945-201ENST00000581853 98 ntBASIC3□□□□□ -1.93
RNF39Q9H2S5 AC108676.2-201ENST00000605225 163 ntBASIC3□□□□□ -1.93
RNF39Q9H2S5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3□□□□□ -1.93
RNF39Q9H2S5 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3□□□□□ -1.93
RNF39Q9H2S5 RNU7-90P-201ENST00000459216 62 ntBASIC2.99□□□□□ -1.93
RNF39Q9H2S5 U7.5-201ENST00000517224 61 ntBASIC2.99□□□□□ -1.93
RNF39Q9H2S5 MIR4435-1-201ENST00000582552 80 ntBASIC2.99□□□□□ -1.93
RNF39Q9H2S5 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
RNF39Q9H2S5 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF39Q9H2S5 RNU4-52P-201ENST00000384209 138 ntBASIC2.98□□□□□ -1.93
RNF39Q9H2S5 RPS29P6-201ENST00000438196 145 ntBASIC2.98□□□□□ -1.93
RNF39Q9H2S5 RNU7-88P-201ENST00000458752 63 ntBASIC2.98□□□□□ -1.93
RNF39Q9H2S5 AC079140.2-201ENST00000506193 142 ntBASIC2.98□□□□□ -1.93
RNF39Q9H2S5 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC2.98□□□□□ -1.93
RNF39Q9H2S5 AL353803.5-201ENST00000599815 141 ntBASIC2.98□□□□□ -1.93
RNF39Q9H2S5 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.98□□□□□ -1.93
RNF39Q9H2S5 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
RNF39Q9H2S5 MIR934-201ENST00000401241 83 ntBASIC2.97□□□□□ -1.93
RNF39Q9H2S5 RNA5SP21-201ENST00000410917 96 ntBASIC2.97□□□□□ -1.93
RNF39Q9H2S5 MIR4432-201ENST00000581823 84 ntBASIC2.97□□□□□ -1.93
RNF39Q9H2S5 MIR7153-201ENST00000637758 57 ntBASIC2.97□□□□□ -1.93
RNF39Q9H2S5 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.97□□□□□ -1.93
RNF39Q9H2S5 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RNF39Q9H2S5 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.96□□□□□ -1.94
RNF39Q9H2S5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC2.96□□□□□ -1.94
RNF39Q9H2S5 MIR9-1-201ENST00000385198 89 ntBASIC2.96□□□□□ -1.94
RNF39Q9H2S5 RNU6-1111P-201ENST00000391118 107 ntBASIC2.96□□□□□ -1.94
RNF39Q9H2S5 MIR3937-201ENST00000580135 106 ntBASIC2.96□□□□□ -1.94
RNF39Q9H2S5 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.96□□□□□ -1.94
RNF39Q9H2S5 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF39Q9H2S5 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.96□□□□□ -1.94
RNF39Q9H2S5 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
RNF39Q9H2S5 MIR196B-201ENST00000384852 84 ntBASIC2.95□□□□□ -1.94
RNF39Q9H2S5 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
RNF39Q9H2S5 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.95□□□□□ -1.94
RNF39Q9H2S5 HMGN2P23-201ENST00000456759 269 ntBASIC2.95□□□□□ -1.94
RNF39Q9H2S5 RNU6-782P-201ENST00000516852 104 ntBASIC2.95□□□□□ -1.94
RNF39Q9H2S5 RNU1-92P-201ENST00000517017 135 ntBASIC2.95□□□□□ -1.94
RNF39Q9H2S5 RNU6-1174P-201ENST00000517278 101 ntBASIC2.95□□□□□ -1.94
RNF39Q9H2S5 SNORD33-201ENST00000362761 85 ntBASIC2.94□□□□□ -1.94
RNF39Q9H2S5 SNORA80D-201ENST00000384488 135 ntBASIC2.94□□□□□ -1.94
RNF39Q9H2S5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
RNF39Q9H2S5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
RNF39Q9H2S5 RNU6-859P-201ENST00000362728 107 ntBASIC2.93□□□□□ -1.94
RNF39Q9H2S5 RNY1P9-201ENST00000532431 109 ntBASIC2.93□□□□□ -1.94
RNF39Q9H2S5 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC2.93□□□□□ -1.94
RNF39Q9H2S5 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms