Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 MIR942-201ENST00000401111 86 ntBASIC1.68□□□□□ -2.14
RARAP10276 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.68□□□□□ -2.14
RARAP10276 RNU6-634P-201ENST00000459134 106 ntBASIC1.68□□□□□ -2.14
RARAP10276 RNU6-539P-201ENST00000516665 103 ntBASIC1.68□□□□□ -2.14
RARAP10276 MIR502-201ENST00000606349 86 ntBASIC1.68□□□□□ -2.14
RARAP10276 uc_338.16-201ENST00000621804 95 ntBASIC1.68□□□□□ -2.14
RARAP10276 RNU6-590P-201ENST00000365039 107 ntBASIC1.67□□□□□ -2.14
RARAP10276 SNORD12-201ENST00000391002 90 ntBASIC1.67□□□□□ -2.14
RARAP10276 RNU6-587P-201ENST00000391282 106 ntBASIC1.67□□□□□ -2.14
RARAP10276 MIR1827-201ENST00000408549 66 ntBASIC1.67□□□□□ -2.14
RARAP10276 RNU6-1052P-201ENST00000411398 104 ntBASIC1.67□□□□□ -2.14
RARAP10276 SNORA25.15-201ENST00000516487 89 ntBASIC1.67□□□□□ -2.14
RARAP10276 RNU6-719P-201ENST00000516671 104 ntBASIC1.67□□□□□ -2.14
RARAP10276 SNORA31.14-201ENST00000516728 116 ntBASIC1.67□□□□□ -2.14
RARAP10276 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
RARAP10276 RNU6-330P-201ENST00000363015 107 ntBASIC1.66□□□□□ -2.14
RARAP10276 SNORD115-44-201ENST00000365391 82 ntBASIC1.66□□□□□ -2.14
RARAP10276 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.66□□□□□ -2.14
RARAP10276 RNU2-59P-201ENST00000410482 191 ntBASIC1.66□□□□□ -2.14
RARAP10276 Y_RNA.606-201ENST00000410579 103 ntBASIC1.66□□□□□ -2.14
RARAP10276 AC067940.1-201ENST00000458411 300 ntBASIC1.66□□□□□ -2.14
RARAP10276 AC097510.1-201ENST00000510945 133 ntBASIC1.66□□□□□ -2.14
RARAP10276 RNU6-287P-201ENST00000516230 98 ntBASIC1.66□□□□□ -2.14
RARAP10276 Evf-2_5p.1-201ENST00000614213 142 ntBASIC1.66□□□□□ -2.14
RARAP10276 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
RARAP10276 SNORA8.1-201ENST00000384250 140 ntBASIC1.65□□□□□ -2.15
RARAP10276 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.65□□□□□ -2.15
RARAP10276 U6.81-201ENST00000612550 106 ntBASIC1.65□□□□□ -2.15
RARAP10276 RNU6-824P-201ENST00000363724 104 ntBASIC1.64□□□□□ -2.15
RARAP10276 Y_RNA.174-201ENST00000363781 105 ntBASIC1.64□□□□□ -2.15
RARAP10276 RNU6-681P-201ENST00000364012 104 ntBASIC1.64□□□□□ -2.15
RARAP10276 AP1B1P2-201ENST00000416196 106 ntBASIC1.64□□□□□ -2.15
RARAP10276 RNU6-1057P-201ENST00000517162 102 ntBASIC1.64□□□□□ -2.15
RARAP10276 AC022709.1-201ENST00000615967 87 ntBASIC1.64□□□□□ -2.15
RARAP10276 RNA5SP403-201ENST00000363598 108 ntBASIC1.63□□□□□ -2.15
RARAP10276 RNU6-1241P-201ENST00000384536 107 ntBASIC1.63□□□□□ -2.15
RARAP10276 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
RARAP10276 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.63□□□□□ -2.15
RARAP10276 AC002429.1-201ENST00000437672 148 ntBASIC1.63□□□□□ -2.15
RARAP10276 RNU7-13P-201ENST00000516413 62 ntBASIC1.63□□□□□ -2.15
RARAP10276 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.63□□□□□ -2.15
RARAP10276 SNORD115-24-201ENST00000363528 82 ntBASIC1.62□□□□□ -2.15
RARAP10276 MIR222-201ENST00000384992 110 ntBASIC1.62□□□□□ -2.15
RARAP10276 MIR320A-201ENST00000385302 82 ntBASIC1.62□□□□□ -2.15
RARAP10276 U3.27-201ENST00000391237 200 ntBASIC1.62□□□□□ -2.15
RARAP10276 NEAT1_2.1-201ENST00000620525 105 ntBASIC1.62□□□□□ -2.15
RARAP10276 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
RARAP10276 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC1.61□□□□□ -2.15
RARAP10276 RNU7-161P-201ENST00000517289 62 ntBASIC1.61□□□□□ -2.15
RARAP10276 Y_RNA.327-201ENST00000365201 102 ntBASIC1.6□□□□□ -2.15
RARAP10276 RNA5SP190-201ENST00000365222 118 ntBASIC1.6□□□□□ -2.15
RARAP10276 RNU6-1177P-201ENST00000391058 104 ntBASIC1.6□□□□□ -2.15
RARAP10276 MIR2113-201ENST00000459007 91 ntBASIC1.6□□□□□ -2.15
RARAP10276 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
RARAP10276 RNU6-1126P-201ENST00000384002 107 ntBASIC1.59□□□□□ -2.15
RARAP10276 MIR154-201ENST00000385243 84 ntBASIC1.59□□□□□ -2.15
RARAP10276 MIR1323-201ENST00000408090 73 ntBASIC1.59□□□□□ -2.15
RARAP10276 RNU4-62P-201ENST00000410125 130 ntBASIC1.59□□□□□ -2.15
RARAP10276 AC098934.3-201ENST00000430450 190 ntBASIC1.59□□□□□ -2.15
RARAP10276 SNORD13-201ENST00000459299 104 ntBASIC1.59□□□□□ -2.15
RARAP10276 MIR548AG2-201ENST00000581228 64 ntBASIC1.59□□□□□ -2.15
RARAP10276 AL627230.5-201ENST00000619807 58 ntBASIC1.59□□□□□ -2.15
RARAP10276 SNORA25-201ENST00000384384 134 ntBASIC1.58□□□□□ -2.16
RARAP10276 RNU6-540P-201ENST00000384622 101 ntBASIC1.58□□□□□ -2.16
RARAP10276 MIR1304-201ENST00000408243 91 ntBASIC1.58□□□□□ -2.16
RARAP10276 MIR3920-201ENST00000581751 86 ntBASIC1.58□□□□□ -2.16
RARAP10276 MIR3675-201ENST00000583661 73 ntBASIC1.58□□□□□ -2.16
RARAP10276 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.58□□□□□ -2.16
RARAP10276 SNORD115-31-201ENST00000365318 82 ntBASIC1.57□□□□□ -2.16
RARAP10276 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RARAP10276 RNA5SP327-201ENST00000362494 101 ntBASIC1.56□□□□□ -2.16
RARAP10276 Y_RNA.258-201ENST00000364613 105 ntBASIC1.56□□□□□ -2.16
RARAP10276 SNORD114-22-201ENST00000365423 72 ntBASIC1.56□□□□□ -2.16
RARAP10276 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RARAP10276 RNU7-104P-201ENST00000459398 79 ntBASIC1.56□□□□□ -2.16
RARAP10276 AC002350.1-201ENST00000490759 375 ntBASIC1.56□□□□□ -2.16
RARAP10276 AL136317.1-201ENST00000612653 226 ntBASIC1.56□□□□□ -2.16
RARAP10276 RNU6-649P-201ENST00000384463 107 ntBASIC1.55□□□□□ -2.16
RARAP10276 MIR517C-201ENST00000385103 95 ntBASIC1.55□□□□□ -2.16
RARAP10276 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
RARAP10276 FAM19A1-204ENST00000617084 159 ntTSL 5 BASIC1.55□□□□□ -2.16
RARAP10276 RNU6-382P-201ENST00000365181 106 ntBASIC1.54□□□□□ -2.16
RARAP10276 SNORD30.1-201ENST00000391309 70 ntBASIC1.54□□□□□ -2.16
RARAP10276 RNU1-123P-201ENST00000458950 160 ntBASIC1.54□□□□□ -2.16
RARAP10276 RNU6-1110P-201ENST00000516462 101 ntBASIC1.54□□□□□ -2.16
RARAP10276 MIR7974-201ENST00000615835 79 ntBASIC1.54□□□□□ -2.16
RARAP10276 MIR4773-1-201ENST00000637203 78 ntBASIC1.54□□□□□ -2.16
RARAP10276 RNU1-42P-201ENST00000364033 160 ntBASIC1.53□□□□□ -2.16
RARAP10276 RNA5SP117-201ENST00000365294 118 ntBASIC1.53□□□□□ -2.16
RARAP10276 MIR644A-201ENST00000385262 94 ntBASIC1.53□□□□□ -2.16
RARAP10276 SNORD89-201ENST00000390981 114 ntBASIC1.53□□□□□ -2.16
RARAP10276 RNA5SP102-201ENST00000516865 106 ntBASIC1.53□□□□□ -2.16
RARAP10276 SNORD53B-201ENST00000577887 78 ntBASIC1.53□□□□□ -2.16
RARAP10276 RNA5SP62-201ENST00000363457 110 ntBASIC1.52□□□□□ -2.17
RARAP10276 RNU6-392P-201ENST00000364926 101 ntBASIC1.52□□□□□ -2.17
RARAP10276 MIR617-201ENST00000385030 97 ntBASIC1.52□□□□□ -2.17
RARAP10276 SNORA67.6-201ENST00000391093 99 ntBASIC1.52□□□□□ -2.17
RARAP10276 AL354695.1-201ENST00000427935 228 ntBASIC1.52□□□□□ -2.17
RARAP10276 RNU6-274P-201ENST00000459566 107 ntBASIC1.52□□□□□ -2.17
RARAP10276 Y_RNA.386-201ENST00000383913 105 ntBASIC1.51□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 186.1 ms