Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 MIR27B-201ENST00000385129 97 ntBASIC2.7□□□□□ -1.98
NUBP1P53384 AL157834.3-201ENST00000615543 103 ntBASIC2.7□□□□□ -1.98
NUBP1P53384 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.69□□□□□ -1.98
NUBP1P53384 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC2.69□□□□□ -1.98
NUBP1P53384 RNA5SP99-201ENST00000364020 114 ntBASIC2.69□□□□□ -1.98
NUBP1P53384 SNORA80D-201ENST00000384488 135 ntBASIC2.69□□□□□ -1.98
NUBP1P53384 MIR519E-201ENST00000385075 84 ntBASIC2.69□□□□□ -1.98
NUBP1P53384 AL049779.4-201ENST00000604500 156 ntBASIC2.69□□□□□ -1.98
NUBP1P53384 Y_RNA.338-201ENST00000365320 114 ntBASIC2.68□□□□□ -1.98
NUBP1P53384 SUMO2P12-201ENST00000405924 140 ntBASIC2.68□□□□□ -1.98
NUBP1P53384 RNU7-90P-201ENST00000459216 62 ntBASIC2.68□□□□□ -1.98
NUBP1P53384 RNU7-21P-201ENST00000459430 62 ntBASIC2.68□□□□□ -1.98
NUBP1P53384 RN7SL633P-201ENST00000488974 297 ntBASIC2.68□□□□□ -1.98
NUBP1P53384 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.68□□□□□ -1.98
NUBP1P53384 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
NUBP1P53384 RNA5SP393-201ENST00000363423 117 ntBASIC2.67□□□□□ -1.98
NUBP1P53384 MIR512-1-201ENST00000384913 84 ntBASIC2.67□□□□□ -1.98
NUBP1P53384 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.67□□□□□ -1.98
NUBP1P53384 MIR3938-201ENST00000582157 103 ntBASIC2.67□□□□□ -1.98
NUBP1P53384 AC010297.1-201ENST00000623948 149 ntBASIC2.67□□□□□ -1.98
NUBP1P53384 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.66□□□□□ -1.98
NUBP1P53384 RNA5SP289-201ENST00000362332 137 ntBASIC2.66□□□□□ -1.98
NUBP1P53384 MIR520F-201ENST00000384824 87 ntBASIC2.66□□□□□ -1.98
NUBP1P53384 RN7SL75P-201ENST00000461926 281 ntBASIC2.66□□□□□ -1.98
NUBP1P53384 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
NUBP1P53384 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.98
NUBP1P53384 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
NUBP1P53384 RNU6V-201ENST00000384105 107 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 RNU1-143P-201ENST00000516296 146 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 RNU6-1089P-201ENST00000516473 104 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 RNU6-122P-201ENST00000516818 107 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 SCARNA20.6-201ENST00000517251 106 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 RNU6-92P-201ENST00000605893 104 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 U1.23-201ENST00000610293 146 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 RNU1-68P-201ENST00000615382 146 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 U1.39-201ENST00000621562 146 ntBASIC2.65□□□□□ -1.99
NUBP1P53384 RNU6-369P-201ENST00000362515 102 ntBASIC2.64□□□□□ -1.99
NUBP1P53384 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
NUBP1P53384 RNU6-135P-201ENST00000516769 101 ntBASIC2.64□□□□□ -1.99
NUBP1P53384 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.64□□□□□ -1.99
NUBP1P53384 Y_RNA.164-201ENST00000363709 102 ntBASIC2.63□□□□□ -1.99
NUBP1P53384 MIR934-201ENST00000401241 83 ntBASIC2.63□□□□□ -1.99
NUBP1P53384 MIR1287-201ENST00000408492 90 ntBASIC2.63□□□□□ -1.99
NUBP1P53384 ZNF355P-201ENST00000427301 3216 ntBASIC2.63□□□□□ -1.99
NUBP1P53384 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
NUBP1P53384 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
NUBP1P53384 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
NUBP1P53384 MIR3198-2-201ENST00000577868 80 ntBASIC2.62□□□□□ -1.99
NUBP1P53384 MIR6739-201ENST00000622461 75 ntBASIC2.62□□□□□ -1.99
NUBP1P53384 MIR7978-201ENST00000636158 59 ntBASIC2.62□□□□□ -1.99
NUBP1P53384 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
NUBP1P53384 Y_RNA.363-201ENST00000365529 113 ntBASIC2.61□□□□□ -1.99
NUBP1P53384 RNU1-123P-201ENST00000458950 160 ntBASIC2.61□□□□□ -1.99
NUBP1P53384 RNA5SP320-201ENST00000516263 124 ntBASIC2.61□□□□□ -1.99
NUBP1P53384 RNU6-656P-201ENST00000516785 107 ntBASIC2.61□□□□□ -1.99
NUBP1P53384 RNU6-446P-201ENST00000362827 106 ntBASIC2.6□□□□□ -1.99
NUBP1P53384 Y_RNA.250-201ENST00000364542 110 ntBASIC2.6□□□□□ -1.99
NUBP1P53384 RNA5SP117-201ENST00000365294 118 ntBASIC2.6□□□□□ -1.99
NUBP1P53384 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.6□□□□□ -1.99
NUBP1P53384 SNORD42B-201ENST00000458893 67 ntBASIC2.6□□□□□ -1.99
NUBP1P53384 RNA5SP82-201ENST00000516707 92 ntBASIC2.6□□□□□ -1.99
NUBP1P53384 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
NUBP1P53384 SNORD114-4-201ENST00000363962 75 ntBASIC2.59□□□□□ -1.99
NUBP1P53384 RNU6-936P-201ENST00000384005 107 ntBASIC2.59□□□□□ -1.99
NUBP1P53384 SNORA46-201ENST00000384762 135 ntBASIC2.59□□□□□ -1.99
NUBP1P53384 UQCRHP3-201ENST00000451503 251 ntBASIC2.59□□□□□ -1.99
NUBP1P53384 RNA5SP147-201ENST00000516493 109 ntBASIC2.59□□□□□ -1.99
NUBP1P53384 MIR4498-201ENST00000577599 66 ntBASIC2.59□□□□□ -1.99
NUBP1P53384 MIR3605-201ENST00000583214 100 ntBASIC2.59□□□□□ -1.99
NUBP1P53384 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
NUBP1P53384 RNU6-1162P-201ENST00000384443 104 ntBASIC2.58□□□□□ -2
NUBP1P53384 MIR17-201ENST00000385012 84 ntBASIC2.58□□□□□ -2
NUBP1P53384 TRAJ11-201ENST00000390526 60 ntAPPRIS P1 BASIC2.58□□□□□ -2
NUBP1P53384 RNU6-910P-201ENST00000390844 107 ntBASIC2.58□□□□□ -2
NUBP1P53384 RNU1-78P-201ENST00000391248 165 ntBASIC2.58□□□□□ -2
NUBP1P53384 RNU6-1053P-201ENST00000515930 101 ntBASIC2.58□□□□□ -2
NUBP1P53384 MIR4422-201ENST00000581938 83 ntBASIC2.58□□□□□ -2
NUBP1P53384 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.58□□□□□ -2
NUBP1P53384 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.57□□□□□ -2
NUBP1P53384 AL136317.1-201ENST00000612653 226 ntBASIC2.57□□□□□ -2
NUBP1P53384 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
NUBP1P53384 MIR548L-201ENST00000408303 86 ntBASIC2.56□□□□□ -2
NUBP1P53384 AC018659.1-201ENST00000551083 169 ntBASIC2.56□□□□□ -2
NUBP1P53384 MIR4460-201ENST00000577862 86 ntBASIC2.56□□□□□ -2
NUBP1P53384 MIR548V-201ENST00000584165 80 ntBASIC2.56□□□□□ -2
NUBP1P53384 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
NUBP1P53384 RNU6-1184P-201ENST00000384588 108 ntBASIC2.55□□□□□ -2
NUBP1P53384 MIR221-201ENST00000385135 110 ntBASIC2.55□□□□□ -2
NUBP1P53384 MT-TY-201ENST00000387409 66 ntBASIC2.55□□□□□ -2
NUBP1P53384 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.55□□□□□ -2
NUBP1P53384 RNU6-469P-201ENST00000516253 101 ntBASIC2.55□□□□□ -2
NUBP1P53384 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
NUBP1P53384 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
NUBP1P53384 MIR1827-201ENST00000408549 66 ntBASIC2.54□□□□□ -2
NUBP1P53384 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NUBP1P53384 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
NUBP1P53384 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.53□□□□□ -2
NUBP1P53384 MIR548C-201ENST00000384815 97 ntBASIC2.53□□□□□ -2
NUBP1P53384 SNORA26.9-201ENST00000391322 122 ntBASIC2.53□□□□□ -2
NUBP1P53384 SNORD79.1-201ENST00000516069 84 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms