Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 HMGN2P38-201ENST00000423806 265 ntBASIC2.33□□□□□ -2.04
RNF40O75150 MTND4LP1-201ENST00000446263 157 ntBASIC2.33□□□□□ -2.04
RNF40O75150 AC019176.1-201ENST00000518519 225 ntBASIC2.33□□□□□ -2.04
RNF40O75150 AC106800.4-201ENST00000614905 153 ntBASIC2.33□□□□□ -2.04
RNF40O75150 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
RNF40O75150 RNU6-1079P-201ENST00000362861 110 ntBASIC2.32□□□□□ -2.04
RNF40O75150 RNU6-668P-201ENST00000364180 107 ntBASIC2.32□□□□□ -2.04
RNF40O75150 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.32□□□□□ -2.04
RNF40O75150 NAMPTP3-201ENST00000569273 224 ntBASIC2.32□□□□□ -2.04
RNF40O75150 MIR6766-201ENST00000622641 72 ntBASIC2.32□□□□□ -2.04
RNF40O75150 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RNF40O75150 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RNF40O75150 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.31□□□□□ -2.04
RNF40O75150 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.31□□□□□ -2.04
RNF40O75150 SNORA25.5-201ENST00000363782 126 ntBASIC2.31□□□□□ -2.04
RNF40O75150 Y_RNA.363-201ENST00000365529 113 ntBASIC2.31□□□□□ -2.04
RNF40O75150 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
RNF40O75150 RNU6-482P-201ENST00000391068 107 ntBASIC2.31□□□□□ -2.04
RNF40O75150 RNU7-102P-201ENST00000458948 62 ntBASIC2.31□□□□□ -2.04
RNF40O75150 RNU7-13P-201ENST00000516413 62 ntBASIC2.31□□□□□ -2.04
RNF40O75150 MIR4448-201ENST00000584360 86 ntBASIC2.31□□□□□ -2.04
RNF40O75150 MIR548O2-201ENST00000616090 70 ntBASIC2.31□□□□□ -2.04
RNF40O75150 RNA5SP99-201ENST00000364020 114 ntBASIC2.3□□□□□ -2.04
RNF40O75150 Y_RNA.330-201ENST00000365230 109 ntBASIC2.3□□□□□ -2.04
RNF40O75150 MIR221-201ENST00000385135 110 ntBASIC2.3□□□□□ -2.04
RNF40O75150 SNORD111-201ENST00000408139 94 ntBASIC2.3□□□□□ -2.04
RNF40O75150 AC048334.1-201ENST00000477975 159 ntBASIC2.3□□□□□ -2.04
RNF40O75150 MIR5002-201ENST00000584713 97 ntBASIC2.3□□□□□ -2.04
RNF40O75150 MIR6509-201ENST00000614603 85 ntBASIC2.3□□□□□ -2.04
RNF40O75150 AC027335.2-201ENST00000624030 375 ntBASIC2.3□□□□□ -2.04
RNF40O75150 Y_RNA.32-201ENST00000362589 110 ntBASIC2.29□□□□□ -2.04
RNF40O75150 RNU6-446P-201ENST00000362827 106 ntBASIC2.29□□□□□ -2.04
RNF40O75150 MIR938-201ENST00000401216 83 ntBASIC2.29□□□□□ -2.04
RNF40O75150 HMGN2P23-201ENST00000456759 269 ntBASIC2.29□□□□□ -2.04
RNF40O75150 AC025033.1-201ENST00000463883 194 ntBASIC2.29□□□□□ -2.04
RNF40O75150 SCARNA21.1-201ENST00000515996 128 ntBASIC2.29□□□□□ -2.04
RNF40O75150 AL512310.8-201ENST00000550183 120 ntBASIC2.29□□□□□ -2.04
RNF40O75150 uc_338.16-201ENST00000621804 95 ntBASIC2.29□□□□□ -2.04
RNF40O75150 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC2.29□□□□□ -2.04
RNF40O75150 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
RNF40O75150 RNA5SP192-201ENST00000364404 120 ntBASIC2.28□□□□□ -2.04
RNF40O75150 RNA5SP160-201ENST00000364866 120 ntBASIC2.28□□□□□ -2.04
RNF40O75150 MIR216B-201ENST00000390186 82 ntBASIC2.28□□□□□ -2.04
RNF40O75150 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.28□□□□□ -2.04
RNF40O75150 AC079140.2-201ENST00000506193 142 ntBASIC2.28□□□□□ -2.04
RNF40O75150 SNORA40.17-201ENST00000517256 115 ntBASIC2.28□□□□□ -2.04
RNF40O75150 RNU7-161P-201ENST00000517289 62 ntBASIC2.28□□□□□ -2.04
RNF40O75150 RNU6-364P-201ENST00000384387 107 ntBASIC2.27□□□□□ -2.05
RNF40O75150 snoU13.9-201ENST00000458927 103 ntBASIC2.27□□□□□ -2.05
RNF40O75150 RNU1-40P-201ENST00000516816 164 ntBASIC2.27□□□□□ -2.05
RNF40O75150 RNU1-97P-201ENST00000516872 164 ntBASIC2.27□□□□□ -2.05
RNF40O75150 MIR4299-201ENST00000577899 72 ntBASIC2.27□□□□□ -2.05
RNF40O75150 MIR4804-201ENST00000581683 73 ntBASIC2.27□□□□□ -2.05
RNF40O75150 MIR3657-201ENST00000584818 117 ntBASIC2.27□□□□□ -2.05
RNF40O75150 RNU6-54P-201ENST00000365563 107 ntBASIC2.26□□□□□ -2.05
RNF40O75150 MIR617-201ENST00000385030 97 ntBASIC2.26□□□□□ -2.05
RNF40O75150 SNORA31.14-201ENST00000516728 116 ntBASIC2.26□□□□□ -2.05
RNF40O75150 RNA5SP364-201ENST00000516938 78 ntBASIC2.26□□□□□ -2.05
RNF40O75150 MIR466-201ENST00000580653 84 ntBASIC2.26□□□□□ -2.05
RNF40O75150 RNU6-940P-201ENST00000363433 104 ntBASIC2.25□□□□□ -2.05
RNF40O75150 RNU6-645P-201ENST00000364649 106 ntBASIC2.25□□□□□ -2.05
RNF40O75150 MIR203A-201ENST00000384836 110 ntBASIC2.25□□□□□ -2.05
RNF40O75150 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
RNF40O75150 RNU6-548P-201ENST00000517083 115 ntBASIC2.25□□□□□ -2.05
RNF40O75150 MIR219B-201ENST00000637023 88 ntBASIC2.25□□□□□ -2.05
RNF40O75150 SNORD33-201ENST00000362761 85 ntBASIC2.24□□□□□ -2.05
RNF40O75150 RNU6-1065P-201ENST00000384513 106 ntBASIC2.24□□□□□ -2.05
RNF40O75150 MIR519E-201ENST00000385075 84 ntBASIC2.24□□□□□ -2.05
RNF40O75150 AL603825.1-201ENST00000438481 80 ntBASIC2.24□□□□□ -2.05
RNF40O75150 RNU7-56P-201ENST00000458744 62 ntBASIC2.24□□□□□ -2.05
RNF40O75150 AC023827.1-201ENST00000569247 97 ntBASIC2.24□□□□□ -2.05
RNF40O75150 AL353997.5-201ENST00000618886 171 ntBASIC2.24□□□□□ -2.05
RNF40O75150 uc_338.20-201ENST00000621563 178 ntBASIC2.24□□□□□ -2.05
RNF40O75150 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
RNF40O75150 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RNF40O75150 SNORD115-24-201ENST00000363528 82 ntBASIC2.23□□□□□ -2.05
RNF40O75150 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC2.23□□□□□ -2.05
RNF40O75150 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
RNF40O75150 SNORD42B-201ENST00000458893 67 ntBASIC2.23□□□□□ -2.05
RNF40O75150 MIR6132-201ENST00000622083 109 ntBASIC2.23□□□□□ -2.05
RNF40O75150 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
RNF40O75150 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
RNF40O75150 MIR7-2-201ENST00000384970 110 ntBASIC2.22□□□□□ -2.05
RNF40O75150 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
RNF40O75150 SNORA31.2-201ENST00000516019 134 ntBASIC2.22□□□□□ -2.05
RNF40O75150 MIR3937-201ENST00000580135 106 ntBASIC2.22□□□□□ -2.05
RNF40O75150 AL359821.1-201ENST00000605519 182 ntBASIC2.22□□□□□ -2.05
RNF40O75150 MIR30A-201ENST00000385092 71 ntBASIC2.21□□□□□ -2.06
RNF40O75150 RNU7-21P-201ENST00000459430 62 ntBASIC2.21□□□□□ -2.06
RNF40O75150 RNA5SP200-201ENST00000516360 103 ntBASIC2.21□□□□□ -2.06
RNF40O75150 MIR7978-201ENST00000636158 59 ntBASIC2.21□□□□□ -2.06
RNF40O75150 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
RNF40O75150 Y_RNA.174-201ENST00000363781 105 ntBASIC2.2□□□□□ -2.06
RNF40O75150 AL356379.1-201ENST00000414105 126 ntBASIC2.2□□□□□ -2.06
RNF40O75150 RNU1-123P-201ENST00000458950 160 ntBASIC2.2□□□□□ -2.06
RNF40O75150 MIR4287-201ENST00000579398 78 ntBASIC2.2□□□□□ -2.06
RNF40O75150 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
RNF40O75150 SNORA2.1-201ENST00000363089 137 ntBASIC2.19□□□□□ -2.06
RNF40O75150 RNA5SP299-201ENST00000391203 116 ntBASIC2.19□□□□□ -2.06
RNF40O75150 RNU6-656P-201ENST00000516785 107 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 259.1 ms