Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 U4.2-201ENST00000618561 85 ntBASIC-2.17□□□□□ -2.76
HMGB3O15347 AL365265.1-201ENST00000621045 234 ntBASIC-2.17□□□□□ -2.76
HMGB3O15347 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNU4-17P-201ENST00000365598 141 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNU6-1104P-201ENST00000384723 104 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 MIR451A-201ENST00000385059 72 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNU6-466P-201ENST00000391224 103 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC-2.18□□□□□ -2.76
HMGB3O15347 MTND3P22-201ENST00000510932 243 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 RNA5SP272-201ENST00000516095 111 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 MIR4744-201ENST00000581563 82 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 AL627230.5-201ENST00000619807 58 ntBASIC-2.18□□□□□ -2.76
HMGB3O15347 Y_RNA.16-201ENST00000362421 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.82-201ENST00000363000 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.92-201ENST00000363043 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.235-201ENST00000364412 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.288-201ENST00000364854 92 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.306-201ENST00000365015 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.312-201ENST00000365089 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.322-201ENST00000365151 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RNU4-61P-201ENST00000411243 107 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.650-201ENST00000459002 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.644-201ENST00000459006 113 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RNU6-976P-201ENST00000516086 111 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RNU6-521P-201ENST00000516663 105 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.777-201ENST00000516982 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
HMGB3O15347 AP002392.1-201ENST00000537692 208 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.771-201ENST00000598668 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.789-201ENST00000622480 102 ntBASIC-2.19□□□□□ -2.76
HMGB3O15347 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.2□□□□□ -2.76
HMGB3O15347 Y_RNA.711-201ENST00000516993 102 ntBASIC-2.2□□□□□ -2.76
HMGB3O15347 MIR3908-201ENST00000579798 126 ntBASIC-2.2□□□□□ -2.76
HMGB3O15347 SNORD18.1-201ENST00000363807 70 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 RNU6-718P-201ENST00000516166 105 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 RNU6-1006P-201ENST00000516998 103 ntBASIC-2.21□□□□□ -2.76
HMGB3O15347 RNU6-647P-201ENST00000364243 107 ntBASIC-2.22□□□□□ -2.76
HMGB3O15347 RNU4-24P-201ENST00000364565 139 ntBASIC-2.22□□□□□ -2.76
HMGB3O15347 RNU6-643P-201ENST00000384018 107 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-746P-201ENST00000384112 109 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-578P-201ENST00000390980 103 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 MIR548F1-201ENST00000408667 84 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-651P-201ENST00000411040 105 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 MTATP6P21-201ENST00000440681 189 ntBASIC-2.23□□□□□ -2.77
HMGB3O15347 RNU6-732P-201ENST00000516033 103 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 RNU6-720P-201ENST00000516363 108 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 MIR4308-201ENST00000580634 81 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 MIR6888-201ENST00000621977 67 ntBASIC-2.24□□□□□ -2.77
HMGB3O15347 Y_RNA.516-201ENST00000384541 124 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 RNA5SP86-201ENST00000390869 98 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 MIR548H1-201ENST00000408610 102 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 MIR1252-201ENST00000408861 65 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 RNU6-90P-201ENST00000606352 106 ntBASIC-2.25□□□□□ -2.77
HMGB3O15347 Y_RNA.44-201ENST00000362676 108 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-19-201ENST00000363098 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-18-201ENST00000363293 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-33-201ENST00000363723 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD115-17-201ENST00000364612 82 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 SNORD63.1-201ENST00000516178 80 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 MIR4282-201ENST00000583613 67 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 Y_RNA.773-201ENST00000607168 90 ntBASIC-2.26□□□□□ -2.77
HMGB3O15347 Y_RNA.3-201ENST00000362331 103 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-1290P-201ENST00000362957 109 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNY4P27-201ENST00000363341 96 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.160-201ENST00000363677 92 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-770P-201ENST00000363929 105 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.247-201ENST00000364500 92 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.426-201ENST00000384068 113 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 MIR548G-201ENST00000408442 89 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU2-51P-201ENST00000410708 197 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 Y_RNA.793-201ENST00000411222 111 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 FGF7P4-201ENST00000509595 295 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-277P-201ENST00000516272 106 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-1338P-201ENST00000516328 91 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 RNU6-412P-201ENST00000516434 106 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 SCARNA24.2-201ENST00000516968 130 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-2.27□□□□□ -2.77
HMGB3O15347 SNORA26.4-201ENST00000391188 123 ntBASIC-2.28□□□□□ -2.77
HMGB3O15347 SNORA40.15-201ENST00000516884 107 ntBASIC-2.28□□□□□ -2.77
HMGB3O15347 U6.96-201ENST00000636425 70 ntBASIC-2.28□□□□□ -2.77
HMGB3O15347 Y_RNA.384-201ENST00000383909 102 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 RNU6-823P-201ENST00000391042 103 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 Y_RNA.645-201ENST00000391229 102 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 RNY4P20-201ENST00000516678 93 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 DLEU2_3.1-201ENST00000620005 73 ntBASIC-2.29□□□□□ -2.78
HMGB3O15347 RNU6-924P-201ENST00000362926 108 ntBASIC-2.3□□□□□ -2.78
HMGB3O15347 ELOCP20-201ENST00000422460 345 ntBASIC-2.3□□□□□ -2.78
HMGB3O15347 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-2.3□□□□□ -2.78
HMGB3O15347 AC091912.2-201ENST00000624798 167 ntBASIC-2.3□□□□□ -2.78
HMGB3O15347 RNU6-495P-201ENST00000362995 107 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.83-201ENST00000363005 113 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.84-201ENST00000363011 104 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 SNORA2.1-201ENST00000363089 137 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 Y_RNA.225-201ENST00000364326 97 ntBASIC-2.31□□□□□ -2.78
HMGB3O15347 COX7A2-206ENST00000472311 325 ntTSL 2 BASIC-2.31□□□□□ -2.78
HMGB3O15347 RNY3P15-201ENST00000516297 97 ntBASIC-2.31□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 222 ms