Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 RNU6-260P-201ENST00000384092 107 ntBASIC-3.15□□□□□ -2.91
CHD1O14646 RNU6-258P-201ENST00000390884 101 ntBASIC-3.15□□□□□ -2.91
CHD1O14646 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-3.15□□□□□ -2.91
CHD1O14646 MIR23C-201ENST00000579846 100 ntBASIC-3.15□□□□□ -2.91
CHD1O14646 AC090617.10-201ENST00000624308 134 ntBASIC-3.15□□□□□ -2.91
CHD1O14646 RNU6-1034P-201ENST00000365335 101 ntBASIC-3.16□□□□□ -2.91
CHD1O14646 MIR628-201ENST00000385229 95 ntBASIC-3.16□□□□□ -2.91
CHD1O14646 AL731563.1-201ENST00000442202 214 ntBASIC-3.16□□□□□ -2.91
CHD1O14646 Z83846.1-201ENST00000446798 265 ntBASIC-3.16□□□□□ -2.91
CHD1O14646 RNU6-1016P-201ENST00000516689 94 ntBASIC-3.16□□□□□ -2.91
CHD1O14646 Y_RNA.143-201ENST00000363520 106 ntBASIC-3.16□□□□□ -2.92
CHD1O14646 Y_RNA.188-201ENST00000363952 111 ntBASIC-3.16□□□□□ -2.92
CHD1O14646 SNORA33.1-201ENST00000364957 130 ntBASIC-3.16□□□□□ -2.92
CHD1O14646 MIR34C-201ENST00000384831 77 ntBASIC-3.16□□□□□ -2.92
CHD1O14646 RNU6-373P-201ENST00000411247 98 ntBASIC-3.16□□□□□ -2.92
CHD1O14646 RNU7-4P-201ENST00000516961 62 ntBASIC-3.16□□□□□ -2.92
CHD1O14646 AC021443.1-201ENST00000604478 211 ntBASIC-3.16□□□□□ -2.92
CHD1O14646 Y_RNA.298-201ENST00000364960 107 ntBASIC-3.17□□□□□ -2.92
CHD1O14646 MTND3P10-201ENST00000450967 341 ntBASIC-3.17□□□□□ -2.92
CHD1O14646 DLEU2_2.2-201ENST00000615474 90 ntBASIC-3.17□□□□□ -2.92
CHD1O14646 Y_RNA.3-201ENST00000362331 103 ntBASIC-3.18□□□□□ -2.92
CHD1O14646 Y_RNA.153-201ENST00000363615 91 ntBASIC-3.18□□□□□ -2.92
CHD1O14646 AC138907.4-201ENST00000570107 226 ntBASIC-3.18□□□□□ -2.92
CHD1O14646 MIR1321-201ENST00000637766 79 ntBASIC-3.18□□□□□ -2.92
CHD1O14646 Y_RNA.314-201ENST00000365114 102 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 MIR122-201ENST00000385044 85 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 RNU6-453P-201ENST00000516819 85 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 MIR4536-1-201ENST00000583537 88 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 Y_RNA.176-201ENST00000363815 109 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 U8.20-201ENST00000459445 131 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 RNU6-1213P-201ENST00000517075 94 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 AL138825.1-201ENST00000618587 192 ntBASIC-3.19□□□□□ -2.92
CHD1O14646 RNU6-1040P-201ENST00000383974 107 ntBASIC-3.2□□□□□ -2.92
CHD1O14646 RNU6-937P-201ENST00000384325 106 ntBASIC-3.2□□□□□ -2.92
CHD1O14646 RNU6-616P-201ENST00000384353 107 ntBASIC-3.2□□□□□ -2.92
CHD1O14646 MTND1P1-201ENST00000445453 368 ntBASIC-3.2□□□□□ -2.92
CHD1O14646 RNU7-164P-201ENST00000459221 62 ntBASIC-3.2□□□□□ -2.92
CHD1O14646 RNU6-232P-201ENST00000517144 64 ntBASIC-3.2□□□□□ -2.92
CHD1O14646 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-3.2□□□□□ -2.92
CHD1O14646 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-3.2□□□□□ -2.92
CHD1O14646 RNU7-123P-201ENST00000515911 60 ntBASIC-3.21□□□□□ -2.92
CHD1O14646 VN1R91P-201ENST00000594377 169 ntBASIC-3.21□□□□□ -2.92
CHD1O14646 SNX3P1Y-201ENST00000615757 176 ntBASIC-3.21□□□□□ -2.92
CHD1O14646 snoU18.1-201ENST00000629629 71 ntBASIC-3.21□□□□□ -2.92
CHD1O14646 RNU6-1090P-201ENST00000364065 94 ntBASIC-3.22□□□□□ -2.92
CHD1O14646 SNORA26.8-201ENST00000391306 124 ntBASIC-3.22□□□□□ -2.92
CHD1O14646 MIR548W-201ENST00000581970 74 ntBASIC-3.22□□□□□ -2.92
CHD1O14646 Y_RNA.8-201ENST00000362353 102 ntBASIC-3.22□□□□□ -2.93
CHD1O14646 RNU6-1129P-201ENST00000515964 104 ntBASIC-3.22□□□□□ -2.93
CHD1O14646 RNA5SP147-201ENST00000516493 109 ntBASIC-3.22□□□□□ -2.93
CHD1O14646 RNU6-521P-201ENST00000516663 105 ntBASIC-3.22□□□□□ -2.93
CHD1O14646 RNU6-483P-201ENST00000384088 108 ntBASIC-3.23□□□□□ -2.93
CHD1O14646 MIR548A1-201ENST00000385041 97 ntBASIC-3.23□□□□□ -2.93
CHD1O14646 RN7SKP298-201ENST00000515950 94 ntBASIC-3.23□□□□□ -2.93
CHD1O14646 Y_RNA.418-201ENST00000384029 102 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 Y_RNA.519-201ENST00000384553 102 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 Y_RNA.569-201ENST00000384749 103 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 RNU6-101P-201ENST00000410323 104 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 MTND5P5-201ENST00000503764 376 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 FGF7P7-201ENST00000514120 227 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 AL050303.3-201ENST00000613704 284 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 RNU6-1177P-201ENST00000391058 104 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 MTND4LP30-201ENST00000454092 297 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 RNU6-75P-201ENST00000515944 104 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 AC120024.2-201ENST00000576526 175 ntBASIC-3.24□□□□□ -2.93
CHD1O14646 Y_RNA.693-201ENST00000516641 110 ntBASIC-3.25□□□□□ -2.93
CHD1O14646 Y_RNA.830-201ENST00000628531 96 ntBASIC-3.25□□□□□ -2.93
CHD1O14646 RNU6-1283P-201ENST00000365314 105 ntBASIC-3.26□□□□□ -2.93
CHD1O14646 RNU6-1152P-201ENST00000384576 107 ntBASIC-3.26□□□□□ -2.93
CHD1O14646 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-3.26□□□□□ -2.93
CHD1O14646 RNU6-1174P-201ENST00000517278 101 ntBASIC-3.26□□□□□ -2.93
CHD1O14646 RNY3P3-201ENST00000363816 102 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 snoU13.10-201ENST00000459301 103 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 RNU6-240P-201ENST00000516098 97 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 Y_RNA.721-201ENST00000517207 102 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC-3.27□□□□□ -2.93
CHD1O14646 SNORD19B.1-201ENST00000630615 80 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 AL512310.12-203ENST00000640543 90 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 MIRLET7F1-201ENST00000362202 87 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 Y_RNA.474-201ENST00000384341 102 ntBASIC-3.27□□□□□ -2.93
CHD1O14646 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC-3.27□□□□□ -2.93
CHD1O14646 Y_RNA.59-201ENST00000362828 102 ntBASIC-3.28□□□□□ -2.93
CHD1O14646 RNU6-1234P-201ENST00000516877 103 ntBASIC-3.28□□□□□ -2.93
CHD1O14646 SNORA63.2-201ENST00000362603 126 ntBASIC-3.29□□□□□ -2.94
CHD1O14646 MIR521-2-201ENST00000384818 87 ntBASIC-3.29□□□□□ -2.94
CHD1O14646 MIR616-201ENST00000385293 97 ntBASIC-3.29□□□□□ -2.94
CHD1O14646 RNU6-1109P-201ENST00000391187 107 ntBASIC-3.29□□□□□ -2.94
CHD1O14646 snoU13.17-201ENST00000458802 104 ntBASIC-3.29□□□□□ -2.94
CHD1O14646 MIR203A-201ENST00000384836 110 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 MIR513C-201ENST00000401352 84 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 AC138393.2-201ENST00000414742 246 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 RNU6-1281P-201ENST00000516223 105 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 RNU6-65P-201ENST00000516332 98 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 MIR6509-201ENST00000614603 85 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 RNU6-246P-201ENST00000384702 107 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-3.3□□□□□ -2.94
CHD1O14646 RNU6-561P-201ENST00000516222 102 ntBASIC-3.3□□□□□ -2.94
CHD1O14646 Y_RNA.82-201ENST00000363000 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.92-201ENST00000363043 102 ntBASIC-3.31□□□□□ -2.94
CHD1O14646 Y_RNA.235-201ENST00000364412 102 ntBASIC-3.31□□□□□ -2.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms