Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MIR573-201ENST00000384964 99 ntBASIC1.85□□□□□ -2.11
KRTAP3-3Q9BYR6 RNU6-258P-201ENST00000390884 101 ntBASIC1.85□□□□□ -2.11
KRTAP3-3Q9BYR6 RPS29P33-201ENST00000456717 146 ntBASIC1.85□□□□□ -2.11
KRTAP3-3Q9BYR6 RNA5SP268-201ENST00000516828 124 ntBASIC1.85□□□□□ -2.11
KRTAP3-3Q9BYR6 MIR5047-201ENST00000579212 100 ntBASIC1.85□□□□□ -2.11
KRTAP3-3Q9BYR6 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
KRTAP3-3Q9BYR6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC1.85□□□□□ -2.11
KRTAP3-3Q9BYR6 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC1.84□□□□□ -2.11
KRTAP3-3Q9BYR6 SNORD23.1-201ENST00000408212 104 ntBASIC1.84□□□□□ -2.11
KRTAP3-3Q9BYR6 RNU6-1238P-201ENST00000517215 102 ntBASIC1.84□□□□□ -2.11
KRTAP3-3Q9BYR6 MIR5096-201ENST00000583713 70 ntBASIC1.84□□□□□ -2.11
KRTAP3-3Q9BYR6 AC084768.2-201ENST00000622736 221 ntBASIC1.84□□□□□ -2.11
KRTAP3-3Q9BYR6 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC1.84□□□□□ -2.11
KRTAP3-3Q9BYR6 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC1.84□□□□□ -2.12
KRTAP3-3Q9BYR6 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
KRTAP3-3Q9BYR6 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 SOS1-202ENST00000402219 8314 ntAPPRIS P2 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 CEP162-202ENST00000403245 5156 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 RNA5SP42-201ENST00000364278 115 ntBASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 RNU7-188P-201ENST00000517063 64 ntBASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR4277-201ENST00000578298 84 ntBASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 AC008745.1-201ENST00000604064 271 ntBASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
KRTAP3-3Q9BYR6 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 RNU1-124P-201ENST00000363861 145 ntBASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR184-201ENST00000384962 84 ntBASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 RNA5SP424-201ENST00000390988 115 ntBASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 SNORA70.22-201ENST00000517160 124 ntBASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR6867-201ENST00000610636 67 ntBASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
KRTAP3-3Q9BYR6 AC027290.2-201ENST00000623210 18662 ntBASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR202-201ENST00000362219 110 ntBASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 SNORA17.4-201ENST00000391287 132 ntBASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 AC006989.1-201ENST00000427212 131 ntBASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 snoU13.26-201ENST00000459452 105 ntBASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 RNU6-175P-201ENST00000516896 107 ntBASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR7107-201ENST00000611489 80 ntBASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.81□□□□□ -2.12
KRTAP3-3Q9BYR6 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 SNORA36.1-201ENST00000363424 132 ntBASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 RNU6-1036P-201ENST00000383959 104 ntBASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 AC107016.2-201ENST00000547968 190 ntBASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 AC245884.12-201ENST00000615364 59 ntBASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 snoR1.1-201ENST00000628177 80 ntBASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
KRTAP3-3Q9BYR6 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR30E-201ENST00000362104 92 ntBASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 Y_RNA.613-201ENST00000410726 97 ntBASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 RNA5SP169-201ENST00000517268 117 ntBASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR4644-201ENST00000579929 84 ntBASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR6888-201ENST00000621977 67 ntBASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 SNORA50A-202ENST00000629536 136 ntBASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC1.79□□□□□ -2.12
KRTAP3-3Q9BYR6 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 CEP97-201ENST00000341893 8361 ntAPPRIS P3 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 SNORA46-201ENST00000384762 135 ntBASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 RNA5SP492-201ENST00000411330 114 ntBASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 FABP5P4-201ENST00000437203 171 ntBASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 RNU6-579P-201ENST00000516879 102 ntBASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 AC026333.2-201ENST00000542164 106 ntBASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR3939-201ENST00000582614 106 ntBASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 MIR6500-201ENST00000622700 86 ntBASIC1.78□□□□□ -2.12
KRTAP3-3Q9BYR6 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
KRTAP3-3Q9BYR6 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 Y_RNA.134-201ENST00000363435 105 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 RNA5SP171-201ENST00000391071 115 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 SNORA3.3-201ENST00000408712 125 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 SNORA31.9-201ENST00000516429 84 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR2276-201ENST00000516886 89 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 MIR4299-201ENST00000577899 72 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 AL445584.3-201ENST00000617173 78 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 AL355480.1-201ENST00000629041 99 ntBASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 FTX-214ENST00000638437 12267 ntTSL 5 BASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
KRTAP3-3Q9BYR6 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 212.4 ms