Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ATG4DQ86TL0 Y_RNA.56-201ENST00000362798 112 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 RNU6-681P-201ENST00000364012 104 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
ATG4DQ86TL0 Y_RNA.606-201ENST00000410579 103 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 SNORD83.1-201ENST00000411362 77 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 SNORA77B-201ENST00000578179 125 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 MIR4769-201ENST00000584126 77 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 RNU7-10P-201ENST00000607194 63 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 DLEU2_3.2-201ENST00000612883 73 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 MIR6082-201ENST00000613604 109 ntBASIC1.78□□□□□ -2.12
ATG4DQ86TL0 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
ATG4DQ86TL0 AL359851.1-201ENST00000569460 4997 ntBASIC1.78□□□□□ -2.13
ATG4DQ86TL0 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.78□□□□□ -2.13
ATG4DQ86TL0 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
ATG4DQ86TL0 SNORD115-22-201ENST00000364456 82 ntBASIC1.77□□□□□ -2.13
ATG4DQ86TL0 Y_RNA.443-201ENST00000384135 111 ntBASIC1.77□□□□□ -2.13
ATG4DQ86TL0 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.77□□□□□ -2.13
ATG4DQ86TL0 AC097510.1-201ENST00000510945 133 ntBASIC1.77□□□□□ -2.13
ATG4DQ86TL0 RNU6-881P-201ENST00000516813 102 ntBASIC1.77□□□□□ -2.13
ATG4DQ86TL0 IST1-227ENST00000626438 126 ntTSL 5 BASIC1.77□□□□□ -2.13
ATG4DQ86TL0 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.77□□□□□ -2.13
ATG4DQ86TL0 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ATG4DQ86TL0 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
ATG4DQ86TL0 RNA5SP99-201ENST00000364020 114 ntBASIC1.76□□□□□ -2.13
ATG4DQ86TL0 SNORA24B-201ENST00000384176 131 ntBASIC1.76□□□□□ -2.13
ATG4DQ86TL0 MIR1257-201ENST00000408490 117 ntBASIC1.76□□□□□ -2.13
ATG4DQ86TL0 AC055731.1-201ENST00000474387 401 ntBASIC1.76□□□□□ -2.13
ATG4DQ86TL0 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC1.76□□□□□ -2.13
ATG4DQ86TL0 U6.81-201ENST00000612550 106 ntBASIC1.76□□□□□ -2.13
ATG4DQ86TL0 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.76□□□□□ -2.13
ATG4DQ86TL0 SNORA25.4-201ENST00000363666 124 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 MIR451A-201ENST00000385059 72 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 MIR599-201ENST00000385069 95 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 AC003989.2-201ENST00000440224 169 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 snoU13.23-201ENST00000458863 104 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 AC015712.3-201ENST00000559380 164 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 AL096840.1-201ENST00000603287 93 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 MTRNR2L2-201ENST00000604882 87 ntBASIC1.75□□□□□ -2.13
ATG4DQ86TL0 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.75□□□□□ -2.13
ATG4DQ86TL0 SNORD116-24-201ENST00000384549 92 ntBASIC1.74□□□□□ -2.13
ATG4DQ86TL0 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
ATG4DQ86TL0 RNU6-604P-201ENST00000390917 100 ntBASIC1.74□□□□□ -2.13
ATG4DQ86TL0 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.74□□□□□ -2.13
ATG4DQ86TL0 RNU6-935P-201ENST00000410371 100 ntBASIC1.74□□□□□ -2.13
ATG4DQ86TL0 AC244636.1-201ENST00000421152 228 ntBASIC1.74□□□□□ -2.13
ATG4DQ86TL0 MIR8063-201ENST00000621930 81 ntBASIC1.74□□□□□ -2.13
ATG4DQ86TL0 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ATG4DQ86TL0 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
ATG4DQ86TL0 RNA5SP245-201ENST00000364239 121 ntBASIC1.73□□□□□ -2.13
ATG4DQ86TL0 RNU6-499P-201ENST00000365615 107 ntBASIC1.73□□□□□ -2.13
ATG4DQ86TL0 RNA5SP212-201ENST00000391223 107 ntBASIC1.73□□□□□ -2.13
ATG4DQ86TL0 AC097635.1-201ENST00000450678 155 ntBASIC1.73□□□□□ -2.13
ATG4DQ86TL0 AC108210.2-201ENST00000503681 201 ntBASIC1.73□□□□□ -2.13
ATG4DQ86TL0 MIR6845-201ENST00000613182 61 ntBASIC1.73□□□□□ -2.13
ATG4DQ86TL0 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
ATG4DQ86TL0 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
ATG4DQ86TL0 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
ATG4DQ86TL0 SNORD113.1-201ENST00000363280 73 ntBASIC1.72□□□□□ -2.13
ATG4DQ86TL0 SUMO2P12-201ENST00000405924 140 ntBASIC1.72□□□□□ -2.13
ATG4DQ86TL0 HMGN2P23-201ENST00000456759 269 ntBASIC1.72□□□□□ -2.13
ATG4DQ86TL0 MIR8053-201ENST00000613344 75 ntBASIC1.72□□□□□ -2.13
ATG4DQ86TL0 AL109933.3-201ENST00000619095 188 ntBASIC1.72□□□□□ -2.13
ATG4DQ86TL0 MIR4773-1-201ENST00000637203 78 ntBASIC1.72□□□□□ -2.13
ATG4DQ86TL0 RNU6-1216P-201ENST00000362590 107 ntBASIC1.71□□□□□ -2.14
ATG4DQ86TL0 RNU6-934P-201ENST00000365154 107 ntBASIC1.71□□□□□ -2.14
ATG4DQ86TL0 Y_RNA.330-201ENST00000365230 109 ntBASIC1.71□□□□□ -2.14
ATG4DQ86TL0 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.71□□□□□ -2.14
ATG4DQ86TL0 RNU6-295P-201ENST00000516901 104 ntBASIC1.71□□□□□ -2.14
ATG4DQ86TL0 AC019176.1-201ENST00000518519 225 ntBASIC1.71□□□□□ -2.14
ATG4DQ86TL0 uc_338.20-201ENST00000621563 178 ntBASIC1.71□□□□□ -2.14
ATG4DQ86TL0 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.7□□□□□ -2.14
ATG4DQ86TL0 Y_RNA.258-201ENST00000364613 105 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 SNORA16B-201ENST00000364674 135 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
ATG4DQ86TL0 RNA5SP489-201ENST00000410986 109 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 RNU6-1265P-201ENST00000516342 103 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 RNU6-765P-201ENST00000516916 99 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 AC138907.6-201ENST00000568401 126 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 AC138869.1-201ENST00000568623 124 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 MIR4771-2-201ENST00000577758 74 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 MIR4771-1-201ENST00000582617 74 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 MIR8074-201ENST00000615081 81 ntBASIC1.7□□□□□ -2.14
ATG4DQ86TL0 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.7□□□□□ -2.14
ATG4DQ86TL0 RNU6-382P-201ENST00000365181 106 ntBASIC1.69□□□□□ -2.14
ATG4DQ86TL0 MIR125B2-201ENST00000385128 89 ntBASIC1.69□□□□□ -2.14
ATG4DQ86TL0 RNU6-1177P-201ENST00000391058 104 ntBASIC1.69□□□□□ -2.14
ATG4DQ86TL0 RNU6-237P-201ENST00000515985 71 ntBASIC1.69□□□□□ -2.14
ATG4DQ86TL0 RNA5SP364-201ENST00000516938 78 ntBASIC1.69□□□□□ -2.14
ATG4DQ86TL0 AL773524.1-201ENST00000614065 229 ntBASIC1.69□□□□□ -2.14
ATG4DQ86TL0 RNU6-535P-201ENST00000384722 107 ntBASIC1.68□□□□□ -2.14
ATG4DQ86TL0 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.68□□□□□ -2.14
ATG4DQ86TL0 MIR4511-201ENST00000582784 87 ntBASIC1.68□□□□□ -2.14
ATG4DQ86TL0 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
ATG4DQ86TL0 SNORA16.1-201ENST00000364597 132 ntBASIC1.67□□□□□ -2.14
ATG4DQ86TL0 MIR633-201ENST00000384821 98 ntBASIC1.67□□□□□ -2.14
ATG4DQ86TL0 MIR583-201ENST00000384846 75 ntBASIC1.67□□□□□ -2.14
ATG4DQ86TL0 RPL23AP42-201ENST00000471152 471 ntBASIC1.67□□□□□ -2.14
ATG4DQ86TL0 RNU6-287P-201ENST00000516230 98 ntBASIC1.67□□□□□ -2.14
ATG4DQ86TL0 RNU6-1057P-201ENST00000517162 102 ntBASIC1.67□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms