Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.81□□□□□ -2.7
H3F3AP84243 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.81□□□□□ -2.7
H3F3AP84243 MIR4760-201ENST00000585040 80 ntBASIC-1.81□□□□□ -2.7
H3F3AP84243 MIR6129-201ENST00000616087 109 ntBASIC-1.81□□□□□ -2.7
H3F3AP84243 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.81□□□□□ -2.7
H3F3AP84243 AL606534.2-204ENST00000635008 178 ntBASIC-1.81□□□□□ -2.7
H3F3AP84243 U6.96-201ENST00000636425 70 ntBASIC-1.81□□□□□ -2.7
H3F3AP84243 RNU6-235P-201ENST00000362644 107 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU6-990P-201ENST00000364385 104 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU4-24P-201ENST00000364565 139 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU6-1040P-201ENST00000383974 107 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU6-1289P-201ENST00000384431 106 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 Y_RNA.559-201ENST00000384686 107 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU6-466P-201ENST00000391224 103 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 RNU4-43P-201ENST00000410628 137 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 AC037487.3-201ENST00000606668 112 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 AC025253.1-201ENST00000613623 543 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 MIR3688-2-201ENST00000636963 87 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 MIR4320-201ENST00000636981 65 ntBASIC-1.82□□□□□ -2.7
H3F3AP84243 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.83□□□□□ -2.7
H3F3AP84243 RNU6-326P-201ENST00000365480 107 ntBASIC-1.83□□□□□ -2.7
H3F3AP84243 Y_RNA.445-201ENST00000384168 102 ntBASIC-1.83□□□□□ -2.7
H3F3AP84243 MIR29B1-201ENST00000385015 81 ntBASIC-1.83□□□□□ -2.7
H3F3AP84243 SNX3P1X-201ENST00000414887 175 ntBASIC-1.83□□□□□ -2.7
H3F3AP84243 RNU6-521P-201ENST00000516663 105 ntBASIC-1.83□□□□□ -2.7
H3F3AP84243 TTC28-AS1_2.1-201ENST00000611117 157 ntBASIC-1.83□□□□□ -2.7
H3F3AP84243 Y_RNA.263-201ENST00000364659 114 ntBASIC-1.84□□□□□ -2.7
H3F3AP84243 Y_RNA.488-201ENST00000384403 102 ntBASIC-1.84□□□□□ -2.7
H3F3AP84243 Y_RNA.581-201ENST00000391017 97 ntBASIC-1.84□□□□□ -2.7
H3F3AP84243 MIR6874-201ENST00000635894 71 ntBASIC-1.84□□□□□ -2.7
H3F3AP84243 MTND4LP32-201ENST00000636111 270 ntBASIC-1.84□□□□□ -2.7
H3F3AP84243 Y_RNA.154-201ENST00000363624 102 ntBASIC-1.85□□□□□ -2.71
H3F3AP84243 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.85□□□□□ -2.71
H3F3AP84243 RNU6-381P-201ENST00000391259 108 ntBASIC-1.85□□□□□ -2.71
H3F3AP84243 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC-1.85□□□□□ -2.71
H3F3AP84243 FGF7P7-201ENST00000514120 227 ntBASIC-1.85□□□□□ -2.71
H3F3AP84243 AC026421.1-201ENST00000519101 163 ntBASIC-1.85□□□□□ -2.71
H3F3AP84243 AC091912.2-201ENST00000624798 167 ntBASIC-1.85□□□□□ -2.71
H3F3AP84243 SNORA26.4-201ENST00000391188 123 ntBASIC-1.86□□□□□ -2.71
H3F3AP84243 MIR548H3-201ENST00000408771 118 ntBASIC-1.86□□□□□ -2.71
H3F3AP84243 AC113618.1-201ENST00000416747 285 ntBASIC-1.86□□□□□ -2.71
H3F3AP84243 AC021146.9-201ENST00000512503 156 ntBASIC-1.86□□□□□ -2.71
H3F3AP84243 RNU6-1006P-201ENST00000516998 103 ntBASIC-1.86□□□□□ -2.71
H3F3AP84243 MIR3908-201ENST00000579798 126 ntBASIC-1.86□□□□□ -2.71
H3F3AP84243 Y_RNA.16-201ENST00000362421 102 ntBASIC-1.87□□□□□ -2.71
H3F3AP84243 Y_RNA.121-201ENST00000363309 113 ntBASIC-1.87□□□□□ -2.71
H3F3AP84243 SNORD115-33-201ENST00000363723 82 ntBASIC-1.87□□□□□ -2.71
H3F3AP84243 RNU6-121P-201ENST00000410525 99 ntBASIC-1.87□□□□□ -2.71
H3F3AP84243 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.87□□□□□ -2.71
H3F3AP84243 RNA5SP26-201ENST00000362406 119 ntBASIC-1.88□□□□□ -2.71
H3F3AP84243 RNU6-651P-201ENST00000411040 105 ntBASIC-1.88□□□□□ -2.71
H3F3AP84243 AC022028.1-201ENST00000412054 408 ntBASIC-1.88□□□□□ -2.71
H3F3AP84243 AC108081.1-201ENST00000604358 221 ntBASIC-1.88□□□□□ -2.71
H3F3AP84243 Y_RNA.773-201ENST00000607168 90 ntBASIC-1.88□□□□□ -2.71
H3F3AP84243 MIR198-201ENST00000637333 62 ntBASIC-1.88□□□□□ -2.71
H3F3AP84243 Y_RNA.54-201ENST00000362766 105 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 RNU6-924P-201ENST00000362926 108 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 RNU6-226P-201ENST00000363778 107 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 Y_RNA.183-201ENST00000363882 113 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 SNORD115-22-201ENST00000364456 82 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 Y_RNA.441-201ENST00000384123 112 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 MIR507-201ENST00000385234 94 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 MIR4770-201ENST00000579149 58 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 DLEU2_3.1-201ENST00000620005 73 ntBASIC-1.89□□□□□ -2.71
H3F3AP84243 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.9□□□□□ -2.71
H3F3AP84243 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.9□□□□□ -2.71
H3F3AP84243 RNU1-115P-201ENST00000365329 160 ntBASIC-1.9□□□□□ -2.71
H3F3AP84243 SNORD116-6-201ENST00000384711 96 ntBASIC-1.9□□□□□ -2.71
H3F3AP84243 U3.27-201ENST00000391237 200 ntBASIC-1.9□□□□□ -2.71
H3F3AP84243 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-1.9□□□□□ -2.71
H3F3AP84243 Y_RNA.247-201ENST00000364500 92 ntBASIC-1.91□□□□□ -2.72
H3F3AP84243 Y_RNA.259-201ENST00000364619 101 ntBASIC-1.91□□□□□ -2.72
H3F3AP84243 RNU6-412P-201ENST00000516434 106 ntBASIC-1.91□□□□□ -2.72
H3F3AP84243 RNU7-6P-201ENST00000516845 62 ntBASIC-1.91□□□□□ -2.72
H3F3AP84243 SCARNA24.2-201ENST00000516968 130 ntBASIC-1.91□□□□□ -2.72
H3F3AP84243 RNU6-90P-201ENST00000606352 106 ntBASIC-1.91□□□□□ -2.72
H3F3AP84243 MIR6502-201ENST00000617296 76 ntBASIC-1.91□□□□□ -2.72
H3F3AP84243 Y_RNA.166-201ENST00000363730 102 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 RNU4-17P-201ENST00000365598 141 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 SNORD116-2-201ENST00000384274 95 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 MIR548G-201ENST00000408442 89 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 Y_RNA.688-201ENST00000516565 95 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 AL365265.1-201ENST00000621045 234 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 AC090574.1-201ENST00000623186 233 ntBASIC-1.92□□□□□ -2.72
H3F3AP84243 SNORA2.1-201ENST00000363089 137 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 Y_RNA.275-201ENST00000364726 110 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 Y_RNA.326-201ENST00000365176 113 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 Y_RNA.474-201ENST00000384341 102 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 AL078595.1-201ENST00000404458 226 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 MIR1255B2-201ENST00000408618 67 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 Y_RNA.793-201ENST00000411222 111 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 MTND1P29-201ENST00000448112 647 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 RNY4P20-201ENST00000516678 93 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 AC002553.4-201ENST00000616896 331 ntBASIC-1.93□□□□□ -2.72
H3F3AP84243 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-1.93□□□□□ -2.72
H3F3AP84243 MIRLET7F1-201ENST00000362202 87 ntBASIC-1.94□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms