Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.87□□□□□ -2.71
APOEP02649 Y_RNA.521-201ENST00000384560 114 ntBASIC-1.87□□□□□ -2.71
APOEP02649 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.87□□□□□ -2.71
APOEP02649 RNU6-876P-201ENST00000391295 104 ntBASIC-1.87□□□□□ -2.71
APOEP02649 AC138393.2-201ENST00000414742 246 ntBASIC-1.87□□□□□ -2.71
APOEP02649 SNORD2.1-201ENST00000458762 69 ntBASIC-1.87□□□□□ -2.71
APOEP02649 AL627230.5-201ENST00000619807 58 ntBASIC-1.87□□□□□ -2.71
APOEP02649 AL365265.1-201ENST00000621045 234 ntBASIC-1.87□□□□□ -2.71
APOEP02649 SNORD36A-201ENST00000362874 73 ntBASIC-1.88□□□□□ -2.71
APOEP02649 Y_RNA.150-201ENST00000363562 102 ntBASIC-1.88□□□□□ -2.71
APOEP02649 MT-TL1-201ENST00000386347 75 ntBASIC-1.88□□□□□ -2.71
APOEP02649 SNORD18.2-201ENST00000459604 70 ntBASIC-1.88□□□□□ -2.71
APOEP02649 AC026407.1-201ENST00000518369 204 ntBASIC-1.88□□□□□ -2.71
APOEP02649 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.88□□□□□ -2.71
APOEP02649 snoR1.1-201ENST00000628177 80 ntBASIC-1.88□□□□□ -2.71
APOEP02649 RNU6-957P-201ENST00000363652 99 ntBASIC-1.89□□□□□ -2.71
APOEP02649 MIR1302-1-201ENST00000637932 143 ntBASIC-1.89□□□□□ -2.71
APOEP02649 AC132825.6-201ENST00000638861 357 ntBASIC-1.89□□□□□ -2.71
APOEP02649 Y_RNA.6-201ENST00000362350 114 ntBASIC-1.9□□□□□ -2.71
APOEP02649 Y_RNA.353-201ENST00000365440 108 ntBASIC-1.9□□□□□ -2.71
APOEP02649 RNU4-17P-201ENST00000365598 141 ntBASIC-1.9□□□□□ -2.71
APOEP02649 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.9□□□□□ -2.71
APOEP02649 Y_RNA.645-201ENST00000391229 102 ntBASIC-1.9□□□□□ -2.71
APOEP02649 HLA-S-202ENST00000425174 53 ntBASIC-1.9□□□□□ -2.71
APOEP02649 Y_RNA.632-201ENST00000459189 102 ntBASIC-1.9□□□□□ -2.71
APOEP02649 SNORA40.15-201ENST00000516884 107 ntBASIC-1.9□□□□□ -2.71
APOEP02649 AC026421.1-201ENST00000519101 163 ntBASIC-1.9□□□□□ -2.71
APOEP02649 RNU4-32P-201ENST00000363404 141 ntBASIC-1.91□□□□□ -2.72
APOEP02649 RNU6-103P-201ENST00000363686 107 ntBASIC-1.91□□□□□ -2.72
APOEP02649 RNU6-806P-201ENST00000365147 105 ntBASIC-1.91□□□□□ -2.72
APOEP02649 RNU6-54P-201ENST00000365563 107 ntBASIC-1.91□□□□□ -2.72
APOEP02649 MIR216B-201ENST00000390186 82 ntBASIC-1.91□□□□□ -2.72
APOEP02649 RNU6-823P-201ENST00000391042 103 ntBASIC-1.91□□□□□ -2.72
APOEP02649 RNU6-592P-201ENST00000411333 103 ntBASIC-1.91□□□□□ -2.72
APOEP02649 RNU6-1057P-201ENST00000517162 102 ntBASIC-1.91□□□□□ -2.72
APOEP02649 Y_RNA.28-201ENST00000362554 111 ntBASIC-1.92□□□□□ -2.72
APOEP02649 Y_RNA.377-201ENST00000365644 108 ntBASIC-1.92□□□□□ -2.72
APOEP02649 MIR1252-201ENST00000408861 65 ntBASIC-1.92□□□□□ -2.72
APOEP02649 ELOCP20-201ENST00000422460 345 ntBASIC-1.92□□□□□ -2.72
APOEP02649 AL589823.1-201ENST00000429577 183 ntBASIC-1.92□□□□□ -2.72
APOEP02649 MIR4744-201ENST00000581563 82 ntBASIC-1.92□□□□□ -2.72
APOEP02649 AC080013.6-201ENST00000606185 215 ntBASIC-1.92□□□□□ -2.72
APOEP02649 Y_RNA.19-201ENST00000362462 99 ntBASIC-1.93□□□□□ -2.72
APOEP02649 Y_RNA.26-201ENST00000362539 101 ntBASIC-1.93□□□□□ -2.72
APOEP02649 Y_RNA.76-201ENST00000362931 109 ntBASIC-1.93□□□□□ -2.72
APOEP02649 RNU6-770P-201ENST00000363929 105 ntBASIC-1.93□□□□□ -2.72
APOEP02649 Y_RNA.298-201ENST00000364960 107 ntBASIC-1.93□□□□□ -2.72
APOEP02649 SNORD19B-201ENST00000459623 84 ntBASIC-1.93□□□□□ -2.72
APOEP02649 RNY3P15-201ENST00000516297 97 ntBASIC-1.93□□□□□ -2.72
APOEP02649 RNU6-1338P-201ENST00000516328 91 ntBASIC-1.93□□□□□ -2.72
APOEP02649 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC-1.93□□□□□ -2.72
APOEP02649 MIR4320-201ENST00000636981 65 ntBASIC-1.93□□□□□ -2.72
APOEP02649 Y_RNA.44-201ENST00000362676 108 ntBASIC-1.94□□□□□ -2.72
APOEP02649 SNORD101-201ENST00000384027 73 ntBASIC-1.94□□□□□ -2.72
APOEP02649 MIR4696-201ENST00000581431 70 ntBASIC-1.94□□□□□ -2.72
APOEP02649 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-1.94□□□□□ -2.72
APOEP02649 AC073869.6-201ENST00000640656 341 ntBASIC-1.94□□□□□ -2.72
APOEP02649 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.82-201ENST00000363000 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.92-201ENST00000363043 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.235-201ENST00000364412 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.306-201ENST00000365015 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.312-201ENST00000365089 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.315-201ENST00000365117 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.322-201ENST00000365151 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 SNORD38.2-201ENST00000384470 69 ntBASIC-1.95□□□□□ -2.72
APOEP02649 RNU6ATAC41P-201ENST00000408600 126 ntBASIC-1.95□□□□□ -2.72
APOEP02649 MTND5P22-201ENST00000458380 195 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.650-201ENST00000459002 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 RNU6-479P-201ENST00000516348 105 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.777-201ENST00000516982 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.771-201ENST00000598668 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 MIR6773-201ENST00000612812 74 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.789-201ENST00000622480 102 ntBASIC-1.95□□□□□ -2.72
APOEP02649 Y_RNA.84-201ENST00000363011 104 ntBASIC-1.96□□□□□ -2.72
APOEP02649 SNORD114-17-201ENST00000364699 75 ntBASIC-1.96□□□□□ -2.72
APOEP02649 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.96□□□□□ -2.72
APOEP02649 RNU6-664P-201ENST00000362381 107 ntBASIC-1.97□□□□□ -2.72
APOEP02649 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.97□□□□□ -2.72
APOEP02649 RNU6-643P-201ENST00000384018 107 ntBASIC-1.97□□□□□ -2.72
APOEP02649 RNU6-578P-201ENST00000390980 103 ntBASIC-1.97□□□□□ -2.72
APOEP02649 AC079760.1-201ENST00000456952 202 ntTSL 3 BASIC-1.97□□□□□ -2.72
APOEP02649 SNORD114-4-201ENST00000363962 75 ntBASIC-1.98□□□□□ -2.73
APOEP02649 MIR124-2-201ENST00000385081 109 ntBASIC-1.98□□□□□ -2.73
APOEP02649 MIR8485-201ENST00000401372 91 ntBASIC-1.98□□□□□ -2.73
APOEP02649 Y_RNA.590-201ENST00000410140 107 ntBASIC-1.98□□□□□ -2.73
APOEP02649 SNX3P1X-201ENST00000414887 175 ntBASIC-1.98□□□□□ -2.73
APOEP02649 MIR5591-201ENST00000578248 65 ntBASIC-1.98□□□□□ -2.73
APOEP02649 AL132765.2-201ENST00000610812 351 ntBASIC-1.98□□□□□ -2.73
APOEP02649 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.98□□□□□ -2.73
APOEP02649 RNU6-623P-201ENST00000363143 105 ntBASIC-1.99□□□□□ -2.73
APOEP02649 SNORD115-23-201ENST00000364461 82 ntBASIC-1.99□□□□□ -2.73
APOEP02649 RNU6-521P-201ENST00000516663 105 ntBASIC-1.99□□□□□ -2.73
APOEP02649 Y_RNA.173-201ENST00000363776 113 ntBASIC-2□□□□□ -2.73
APOEP02649 Y_RNA.197-201ENST00000364004 102 ntBASIC-2□□□□□ -2.73
APOEP02649 Y_RNA.488-201ENST00000384403 102 ntBASIC-2□□□□□ -2.73
APOEP02649 MIRLET7B-201ENST00000385140 83 ntBASIC-2□□□□□ -2.73
APOEP02649 RNU6-101P-201ENST00000410323 104 ntBASIC-2□□□□□ -2.73
APOEP02649 SNORD42B-201ENST00000458893 67 ntBASIC-2□□□□□ -2.73
APOEP02649 RNU7-134P-201ENST00000458997 64 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 234.4 ms