Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GFRA3O60609 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
GFRA3O60609 RNU1-17P-201ENST00000363022 152 ntBASIC2.53□□□□□ -2
GFRA3O60609 DLEU2_6.1-201ENST00000610536 112 ntBASIC2.53□□□□□ -2
GFRA3O60609 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.53□□□□□ -2
GFRA3O60609 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.52□□□□□ -2.01
GFRA3O60609 RNU6-1126P-201ENST00000384002 107 ntBASIC2.52□□□□□ -2.01
GFRA3O60609 RNU6-203P-201ENST00000384038 104 ntBASIC2.52□□□□□ -2.01
GFRA3O60609 MIR216B-201ENST00000390186 82 ntBASIC2.52□□□□□ -2.01
GFRA3O60609 SNORD116.2-201ENST00000391251 93 ntBASIC2.52□□□□□ -2.01
GFRA3O60609 RNU6-295P-201ENST00000516901 104 ntBASIC2.52□□□□□ -2.01
GFRA3O60609 AP003716.2-201ENST00000528260 108 ntBASIC2.52□□□□□ -2.01
GFRA3O60609 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.51□□□□□ -2.01
GFRA3O60609 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.51□□□□□ -2.01
GFRA3O60609 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
GFRA3O60609 MIR521-2-201ENST00000384818 87 ntBASIC2.51□□□□□ -2.01
GFRA3O60609 RNU6-269P-201ENST00000391077 97 ntBASIC2.51□□□□□ -2.01
GFRA3O60609 RNA5SP95-201ENST00000410319 137 ntBASIC2.51□□□□□ -2.01
GFRA3O60609 AC055731.1-201ENST00000474387 401 ntBASIC2.51□□□□□ -2.01
GFRA3O60609 AC021146.9-201ENST00000512503 156 ntBASIC2.51□□□□□ -2.01
GFRA3O60609 MIR26A1-201ENST00000362205 77 ntBASIC2.5□□□□□ -2.01
GFRA3O60609 MIR194-1-201ENST00000384892 85 ntBASIC2.5□□□□□ -2.01
GFRA3O60609 RNU6-321P-201ENST00000410912 106 ntBASIC2.5□□□□□ -2.01
GFRA3O60609 AC244505.6-201ENST00000452829 130 ntBASIC2.5□□□□□ -2.01
GFRA3O60609 AP004217.1-201ENST00000480579 346 ntBASIC2.5□□□□□ -2.01
GFRA3O60609 AC092185.1-201ENST00000491371 97 ntBASIC2.5□□□□□ -2.01
GFRA3O60609 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC2.5□□□□□ -2.01
GFRA3O60609 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
GFRA3O60609 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
GFRA3O60609 SNORA26.9-201ENST00000391322 122 ntBASIC2.49□□□□□ -2.01
GFRA3O60609 MIR1185-1-201ENST00000408598 86 ntBASIC2.49□□□□□ -2.01
GFRA3O60609 RNA5SP344-201ENST00000411081 104 ntBASIC2.49□□□□□ -2.01
GFRA3O60609 AC108667.1-201ENST00000428618 249 ntBASIC2.49□□□□□ -2.01
GFRA3O60609 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
GFRA3O60609 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
GFRA3O60609 RNU6-247P-201ENST00000362636 107 ntBASIC2.48□□□□□ -2.01
GFRA3O60609 RNU6-1162P-201ENST00000384443 104 ntBASIC2.48□□□□□ -2.01
GFRA3O60609 RNA5SP501-201ENST00000410990 112 ntBASIC2.48□□□□□ -2.01
GFRA3O60609 MIR3616-201ENST00000584070 92 ntBASIC2.48□□□□□ -2.01
GFRA3O60609 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC2.48□□□□□ -2.01
GFRA3O60609 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
GFRA3O60609 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
GFRA3O60609 snoU13.21-201ENST00000459368 105 ntBASIC2.47□□□□□ -2.01
GFRA3O60609 RNU7-13P-201ENST00000516413 62 ntBASIC2.47□□□□□ -2.01
GFRA3O60609 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.47□□□□□ -2.01
GFRA3O60609 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.46□□□□□ -2.02
GFRA3O60609 Y_RNA.250-201ENST00000364542 110 ntBASIC2.46□□□□□ -2.02
GFRA3O60609 Y_RNA.325-201ENST00000365171 122 ntBASIC2.46□□□□□ -2.02
GFRA3O60609 AC004965.1-201ENST00000413033 213 ntBASIC2.46□□□□□ -2.02
GFRA3O60609 AC018659.1-201ENST00000551083 169 ntBASIC2.46□□□□□ -2.02
GFRA3O60609 MIR4635-201ENST00000583759 79 ntBASIC2.46□□□□□ -2.02
GFRA3O60609 AL645939.4-201ENST00000604495 135 ntBASIC2.46□□□□□ -2.02
GFRA3O60609 SNORD21-201ENST00000383953 95 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 RNU6-535P-201ENST00000384722 107 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 MIR617-201ENST00000385030 97 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 SNORA40B-201ENST00000385573 128 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 RNU6-696P-201ENST00000390834 107 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 MIR1257-201ENST00000408490 117 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 AC104332.2-201ENST00000429959 156 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.45□□□□□ -2.02
GFRA3O60609 AC067940.1-201ENST00000458411 300 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 MIR7110-201ENST00000612638 86 ntBASIC2.45□□□□□ -2.02
GFRA3O60609 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.45□□□□□ -2.02
GFRA3O60609 RNU6V-201ENST00000384105 107 ntBASIC2.44□□□□□ -2.02
GFRA3O60609 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
GFRA3O60609 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
GFRA3O60609 RNU6-360P-201ENST00000390944 104 ntBASIC2.44□□□□□ -2.02
GFRA3O60609 RNA5SP465-201ENST00000391195 109 ntBASIC2.44□□□□□ -2.02
GFRA3O60609 RNU6ATAC29P-201ENST00000408088 125 ntBASIC2.44□□□□□ -2.02
GFRA3O60609 AC003982.1-202ENST00000469928 248 ntBASIC2.44□□□□□ -2.02
GFRA3O60609 AC008608.1-201ENST00000603910 127 ntBASIC2.44□□□□□ -2.02
GFRA3O60609 U6.103-201ENST00000637085 61 ntBASIC2.44□□□□□ -2.02
GFRA3O60609 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.43□□□□□ -2.02
GFRA3O60609 MIR378A-201ENST00000362177 66 ntBASIC2.43□□□□□ -2.02
GFRA3O60609 MIR519E-201ENST00000385075 84 ntBASIC2.43□□□□□ -2.02
GFRA3O60609 RNA5SP480-201ENST00000516840 109 ntBASIC2.43□□□□□ -2.02
GFRA3O60609 RNU6-894P-201ENST00000517094 105 ntBASIC2.43□□□□□ -2.02
GFRA3O60609 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.43□□□□□ -2.02
GFRA3O60609 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
GFRA3O60609 RNU1-148P-201ENST00000384472 162 ntBASIC2.42□□□□□ -2.02
GFRA3O60609 RNA5SP100-201ENST00000410903 110 ntBASIC2.42□□□□□ -2.02
GFRA3O60609 RNA5SP59-201ENST00000410922 110 ntBASIC2.42□□□□□ -2.02
GFRA3O60609 RNU6-922P-201ENST00000516753 99 ntBASIC2.42□□□□□ -2.02
GFRA3O60609 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.42□□□□□ -2.02
GFRA3O60609 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.42□□□□□ -2.02
GFRA3O60609 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.42□□□□□ -2.02
GFRA3O60609 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC2.41□□□□□ -2.02
GFRA3O60609 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.41□□□□□ -2.02
GFRA3O60609 RNA5SP403-201ENST00000363598 108 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 Y_RNA.246-201ENST00000364495 108 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 RNU6-364P-201ENST00000384387 107 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 MIR518A2-201ENST00000384966 87 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 RNU6ATAC6P-201ENST00000408132 126 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 snoU13.13-201ENST00000458842 104 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 TRMT112P2-201ENST00000512910 132 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 RNU6-419P-201ENST00000517030 63 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 MIR4506-201ENST00000584693 77 ntBASIC2.41□□□□□ -2.02
GFRA3O60609 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC2.41□□□□□ -2.02
GFRA3O60609 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.4□□□□□ -2.02
GFRA3O60609 RNU6-810P-201ENST00000364001 107 ntBASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms