Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-681P-201ENST00000364012 104 ntBASIC2.28□□□□□ -2.04
HOXA2O43364 RNU6-548P-201ENST00000517083 115 ntBASIC2.28□□□□□ -2.04
HOXA2O43364 RNU7-156P-201ENST00000517214 74 ntBASIC2.28□□□□□ -2.04
HOXA2O43364 MIR664A-201ENST00000626086 82 ntBASIC2.28□□□□□ -2.04
HOXA2O43364 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC2.28□□□□□ -2.04
HOXA2O43364 Y_RNA.36-201ENST00000362602 112 ntBASIC2.27□□□□□ -2.05
HOXA2O43364 SNORD111-201ENST00000408139 94 ntBASIC2.27□□□□□ -2.05
HOXA2O43364 AC048334.1-201ENST00000477975 159 ntBASIC2.27□□□□□ -2.05
HOXA2O43364 MTRNR2L2-201ENST00000604882 87 ntBASIC2.27□□□□□ -2.05
HOXA2O43364 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HOXA2O43364 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
HOXA2O43364 Y_RNA.371-201ENST00000365591 113 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 RNU6-649P-201ENST00000384463 107 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 MIR154-201ENST00000385243 84 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 MIR942-201ENST00000401111 86 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 RNU6-935P-201ENST00000410371 100 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 AC008834.1-201ENST00000511612 175 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 RN7SKP88-201ENST00000516847 250 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 RNU6-295P-201ENST00000516901 104 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 7SK.8-201ENST00000612110 250 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 7SK.11-201ENST00000615477 250 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 7SK.13-201ENST00000622040 250 ntBASIC2.26□□□□□ -2.05
HOXA2O43364 RNU6-340P-201ENST00000364005 107 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 RNU6-364P-201ENST00000384387 107 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 RNU6-1241P-201ENST00000384536 107 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
HOXA2O43364 SNORA75.2-201ENST00000391138 150 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 SNORA75.3-201ENST00000391231 150 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 SNORA26.9-201ENST00000391322 122 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 RPS26P5-201ENST00000418544 335 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 HMGN2P38-201ENST00000423806 265 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 AC106800.4-201ENST00000614905 153 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 AL353997.5-201ENST00000618886 171 ntBASIC2.25□□□□□ -2.05
HOXA2O43364 ZNF209P-201ENST00000593450 2304 ntBASIC2.24□□□□□ -2.05
HOXA2O43364 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.24□□□□□ -2.05
HOXA2O43364 Y_RNA.340-201ENST00000365330 92 ntBASIC2.24□□□□□ -2.05
HOXA2O43364 RNU6-154P-201ENST00000384306 106 ntBASIC2.24□□□□□ -2.05
HOXA2O43364 RNU6-535P-201ENST00000384722 107 ntBASIC2.24□□□□□ -2.05
HOXA2O43364 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC2.24□□□□□ -2.05
HOXA2O43364 SNORA31.2-201ENST00000516019 134 ntBASIC2.24□□□□□ -2.05
HOXA2O43364 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC2.24□□□□□ -2.05
HOXA2O43364 AL645939.4-201ENST00000604495 135 ntBASIC2.24□□□□□ -2.05
HOXA2O43364 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HOXA2O43364 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC2.24□□□□□ -2.05
HOXA2O43364 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXA2O43364 MIRLET7G-201ENST00000362280 84 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HOXA2O43364 RNU4-52P-201ENST00000384209 138 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 MIR583-201ENST00000384846 75 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 SNORD30.1-201ENST00000391309 70 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC2.23□□□□□ -2.05
HOXA2O43364 RNA5SP182-201ENST00000516064 82 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 RNU6-1265P-201ENST00000516342 103 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 RNU7-40P-201ENST00000516397 64 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 RNA5SP402-201ENST00000517148 110 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 MIR4676-201ENST00000583078 72 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 MIR3140-201ENST00000583685 90 ntBASIC2.23□□□□□ -2.05
HOXA2O43364 SKIL-204ENST00000458537 7182 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HOXA2O43364 RNU6-291P-201ENST00000384720 107 ntBASIC2.22□□□□□ -2.05
HOXA2O43364 AC079804.2-201ENST00000490376 200 ntBASIC2.22□□□□□ -2.05
HOXA2O43364 MIR5089-201ENST00000580047 84 ntBASIC2.22□□□□□ -2.05
HOXA2O43364 MIR451A-201ENST00000385059 72 ntBASIC2.21□□□□□ -2.06
HOXA2O43364 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
HOXA2O43364 MIR938-201ENST00000401216 83 ntBASIC2.21□□□□□ -2.06
HOXA2O43364 RNU2-59P-201ENST00000410482 191 ntBASIC2.21□□□□□ -2.06
HOXA2O43364 AL591704.2-201ENST00000421658 181 ntBASIC2.21□□□□□ -2.06
HOXA2O43364 RNU6-1057P-201ENST00000517162 102 ntBASIC2.21□□□□□ -2.06
HOXA2O43364 AC023827.1-201ENST00000569247 97 ntBASIC2.21□□□□□ -2.06
HOXA2O43364 NEAT1_2.1-201ENST00000620525 105 ntBASIC2.21□□□□□ -2.06
HOXA2O43364 MIR934-201ENST00000401241 83 ntBASIC2.2□□□□□ -2.06
HOXA2O43364 RNA5SP181-201ENST00000410246 98 ntBASIC2.2□□□□□ -2.06
HOXA2O43364 RNU6-994P-201ENST00000410507 111 ntBASIC2.2□□□□□ -2.06
HOXA2O43364 Y_RNA.606-201ENST00000410579 103 ntBASIC2.2□□□□□ -2.06
HOXA2O43364 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXA2O43364 AC097510.1-201ENST00000510945 133 ntBASIC2.2□□□□□ -2.06
HOXA2O43364 MIR4422-201ENST00000581938 83 ntBASIC2.2□□□□□ -2.06
HOXA2O43364 AC027335.2-201ENST00000624030 375 ntBASIC2.2□□□□□ -2.06
HOXA2O43364 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXA2O43364 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HOXA2O43364 RNA5SP99-201ENST00000364020 114 ntBASIC2.19□□□□□ -2.06
HOXA2O43364 AC008608.1-201ENST00000603910 127 ntBASIC2.19□□□□□ -2.06
HOXA2O43364 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXA2O43364 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
HOXA2O43364 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
HOXA2O43364 RNU6-330P-201ENST00000363015 107 ntBASIC2.18□□□□□ -2.06
HOXA2O43364 RNU6-540P-201ENST00000384622 101 ntBASIC2.18□□□□□ -2.06
HOXA2O43364 RNA5SP458-201ENST00000516188 119 ntBASIC2.18□□□□□ -2.06
HOXA2O43364 Y_RNA.783-201ENST00000613546 102 ntBASIC2.18□□□□□ -2.06
HOXA2O43364 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.17□□□□□ -2.06
HOXA2O43364 RNU1-78P-201ENST00000391248 165 ntBASIC2.17□□□□□ -2.06
HOXA2O43364 AC244505.6-201ENST00000452829 130 ntBASIC2.17□□□□□ -2.06
HOXA2O43364 RNU7-102P-201ENST00000458948 62 ntBASIC2.17□□□□□ -2.06
HOXA2O43364 MIR3675-201ENST00000583661 73 ntBASIC2.17□□□□□ -2.06
HOXA2O43364 U6.81-201ENST00000612550 106 ntBASIC2.17□□□□□ -2.06
HOXA2O43364 MIR6845-201ENST00000613182 61 ntBASIC2.17□□□□□ -2.06
HOXA2O43364 RNA5SP245-201ENST00000364239 121 ntBASIC2.16□□□□□ -2.06
HOXA2O43364 SNORA24B-201ENST00000384176 131 ntBASIC2.16□□□□□ -2.06
HOXA2O43364 SNORA80D-201ENST00000384488 135 ntBASIC2.16□□□□□ -2.06
HOXA2O43364 AL603825.1-201ENST00000438481 80 ntBASIC2.16□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms