Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 SNORD4B-201ENST00000459083 72 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 AC023790.1-201ENST00000482174 347 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 RNU6-857P-201ENST00000515893 110 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 RNU6-165P-201ENST00000517170 99 ntBASIC1.43□□□□□ -2.18
VRK3Q8IV63 MIR103A2-201ENST00000362154 78 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 Y_RNA.57-201ENST00000362806 113 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 Y_RNA.244-201ENST00000364484 109 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 Y_RNA.316-201ENST00000365118 111 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 RNU6-652P-201ENST00000365488 107 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 RNU4-62P-201ENST00000410125 130 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 RNU6-519P-201ENST00000410590 108 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 RNA5SP247-201ENST00000411181 105 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 RNU6-1054P-201ENST00000411293 104 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 AC079140.2-201ENST00000506193 142 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 RNU6-1053P-201ENST00000515930 101 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 SNORA31.24-201ENST00000517232 57 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 AC140658.3-201ENST00000567603 271 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 MIR8063-201ENST00000621930 81 ntBASIC1.42□□□□□ -2.18
VRK3Q8IV63 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
VRK3Q8IV63 Y_RNA.94-201ENST00000363068 106 ntBASIC1.41□□□□□ -2.18
VRK3Q8IV63 RNU7-85P-201ENST00000458851 63 ntBASIC1.41□□□□□ -2.18
VRK3Q8IV63 Y_RNA.648-201ENST00000459455 110 ntBASIC1.41□□□□□ -2.18
VRK3Q8IV63 MIR4498-201ENST00000577599 66 ntBASIC1.41□□□□□ -2.18
VRK3Q8IV63 MIR4491-201ENST00000581087 68 ntBASIC1.41□□□□□ -2.18
VRK3Q8IV63 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
VRK3Q8IV63 BX276092.1-201ENST00000427368 251 ntBASIC1.4□□□□□ -2.19
VRK3Q8IV63 RNA5SP61-201ENST00000516453 100 ntBASIC1.4□□□□□ -2.19
VRK3Q8IV63 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC1.4□□□□□ -2.19
VRK3Q8IV63 MIR4285-201ENST00000581001 85 ntBASIC1.4□□□□□ -2.19
VRK3Q8IV63 C9orf84-204ENST00000394777 4955 ntAPPRIS ALT2 TSL 1 (best) BASIC1.39□□□□□ -2.19
VRK3Q8IV63 MIR378A-201ENST00000362177 66 ntBASIC1.39□□□□□ -2.19
VRK3Q8IV63 SNORD36A-201ENST00000362874 73 ntBASIC1.39□□□□□ -2.19
VRK3Q8IV63 RNU1-36P-201ENST00000365130 165 ntBASIC1.39□□□□□ -2.19
VRK3Q8IV63 RNU6-1065P-201ENST00000384513 106 ntBASIC1.39□□□□□ -2.19
VRK3Q8IV63 AC008834.1-201ENST00000511612 175 ntBASIC1.39□□□□□ -2.19
VRK3Q8IV63 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.39□□□□□ -2.19
VRK3Q8IV63 AC019288.1-201ENST00000557918 224 ntBASIC1.39□□□□□ -2.19
VRK3Q8IV63 MIR3198-2-201ENST00000577868 80 ntBASIC1.39□□□□□ -2.19
VRK3Q8IV63 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
VRK3Q8IV63 RNU1-78P-201ENST00000391248 165 ntBASIC1.38□□□□□ -2.19
VRK3Q8IV63 MIR1236-201ENST00000408340 102 ntBASIC1.38□□□□□ -2.19
VRK3Q8IV63 RNA5SP95-201ENST00000410319 137 ntBASIC1.38□□□□□ -2.19
VRK3Q8IV63 RNU6-1194P-201ENST00000516208 104 ntBASIC1.38□□□□□ -2.19
VRK3Q8IV63 RNU7-153P-201ENST00000516455 62 ntBASIC1.38□□□□□ -2.19
VRK3Q8IV63 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.38□□□□□ -2.19
VRK3Q8IV63 AL512310.8-201ENST00000550183 120 ntBASIC1.38□□□□□ -2.19
VRK3Q8IV63 RNU4-58P-201ENST00000363192 141 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
VRK3Q8IV63 MIR934-201ENST00000401241 83 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 RNU6-955P-201ENST00000410497 104 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 RNU6-531P-201ENST00000516694 104 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 SNORA25.16-201ENST00000516741 121 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 AC019176.1-201ENST00000518519 225 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 MIR4781-201ENST00000585250 76 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 5S_rRNA.15-201ENST00000611169 127 ntBASIC1.37□□□□□ -2.19
VRK3Q8IV63 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.37□□□□□ -2.19
VRK3Q8IV63 RNU6-624P-201ENST00000363411 107 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 SNORD115-37-201ENST00000363768 82 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 Y_RNA.221-201ENST00000364248 96 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 MIR516A2-201ENST00000384888 90 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 MIR516A1-201ENST00000385033 90 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 RNU6-1254P-201ENST00000391266 104 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 SNORD93-201ENST00000408813 74 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 RNU7-106P-201ENST00000459514 67 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 SNORA25.13-201ENST00000516395 103 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 snoU13.31-201ENST00000607291 104 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.36□□□□□ -2.19
VRK3Q8IV63 MIR519A1-201ENST00000385257 85 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 RNU7-185P-201ENST00000459215 60 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 snoU13.11-201ENST00000459219 104 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 RNU7-95P-201ENST00000459222 64 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 RNU6-75P-201ENST00000515944 104 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 AC036111.3-201ENST00000526389 112 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 MIR3937-201ENST00000580135 106 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 MIR4712-201ENST00000583750 82 ntBASIC1.35□□□□□ -2.19
VRK3Q8IV63 SNORD113.3-201ENST00000364630 78 ntBASIC1.34□□□□□ -2.19
VRK3Q8IV63 RNU6ATAC6P-201ENST00000408132 126 ntBASIC1.34□□□□□ -2.19
VRK3Q8IV63 snoU13.21-201ENST00000459368 105 ntBASIC1.34□□□□□ -2.19
VRK3Q8IV63 AC048334.1-201ENST00000477975 159 ntBASIC1.34□□□□□ -2.19
VRK3Q8IV63 RNU4ATAC9P-201ENST00000517146 126 ntBASIC1.34□□□□□ -2.19
VRK3Q8IV63 ZNF209P-201ENST00000593450 2304 ntBASIC1.34□□□□□ -2.2
VRK3Q8IV63 RNU6-315P-201ENST00000362666 107 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 RNU6-53P-201ENST00000365367 106 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 Y_RNA.363-201ENST00000365529 113 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 RNU6-1296P-201ENST00000383879 107 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 SNORA72.6-201ENST00000384520 129 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 SNORD100-201ENST00000408573 76 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 SNORD63B-201ENST00000411005 70 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 RPS27P16-201ENST00000425758 201 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 RNU6-765P-201ENST00000516916 99 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 MIR6082-201ENST00000613604 109 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.33□□□□□ -2.2
VRK3Q8IV63 MIR4662A-201ENST00000637499 67 ntBASIC1.33□□□□□ -2.2
VRK3Q8IV63 Y_RNA.56-201ENST00000362798 112 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 Y_RNA.226-201ENST00000364337 114 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 Y_RNA.283-201ENST00000364798 112 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 Y_RNA.508-201ENST00000384502 114 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 RNU6-243P-201ENST00000391140 107 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 AP1B1P2-201ENST00000416196 106 ntBASIC1.32□□□□□ -2.2
VRK3Q8IV63 RNU6-557P-201ENST00000516842 110 ntBASIC1.32□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 188.5 ms