Protein–RNA interactions for Protein: P54259

ATN1, Atrophin-1, humanhuman

Predicted RBP Predictions only

Length 1,190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1P54259 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
ATN1P54259 AP003716.2-201ENST00000528260 108 ntBASIC3.13□□□□□ -1.91
ATN1P54259 U1.36-201ENST00000620684 176 ntBASIC3.13□□□□□ -1.91
ATN1P54259 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
ATN1P54259 RNU6-922P-201ENST00000516753 99 ntBASIC3.12□□□□□ -1.91
ATN1P54259 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
ATN1P54259 RNA5SP259-201ENST00000365541 109 ntBASIC3.11□□□□□ -1.91
ATN1P54259 RNA5SP100-201ENST00000410903 110 ntBASIC3.11□□□□□ -1.91
ATN1P54259 RNA5SP59-201ENST00000410922 110 ntBASIC3.11□□□□□ -1.91
ATN1P54259 AC025033.1-201ENST00000463883 194 ntBASIC3.11□□□□□ -1.91
ATN1P54259 RN7SL499P-201ENST00000481141 276 ntBASIC3.11□□□□□ -1.91
ATN1P54259 5S_rRNA.3-201ENST00000517021 110 ntBASIC3.11□□□□□ -1.91
ATN1P54259 5S_rRNA.19-201ENST00000612131 110 ntBASIC3.11□□□□□ -1.91
ATN1P54259 MIR548O2-201ENST00000616090 70 ntBASIC3.11□□□□□ -1.91
ATN1P54259 5S_rRNA.18-201ENST00000621941 110 ntBASIC3.11□□□□□ -1.91
ATN1P54259 AC073476.4-201ENST00000628409 72 ntBASIC3.11□□□□□ -1.91
ATN1P54259 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.11□□□□□ -1.91
ATN1P54259 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATN1P54259 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
ATN1P54259 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.1□□□□□ -1.91
ATN1P54259 MIR9-1-201ENST00000385198 89 ntBASIC3.1□□□□□ -1.91
ATN1P54259 MIR1185-1-201ENST00000408598 86 ntBASIC3.1□□□□□ -1.91
ATN1P54259 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC3.1□□□□□ -1.91
ATN1P54259 AC244505.6-201ENST00000452829 130 ntBASIC3.1□□□□□ -1.91
ATN1P54259 RNU7-13P-201ENST00000516413 62 ntBASIC3.1□□□□□ -1.91
ATN1P54259 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.1□□□□□ -1.91
ATN1P54259 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATN1P54259 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
ATN1P54259 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
ATN1P54259 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.09□□□□□ -1.91
ATN1P54259 SNORD56.3-201ENST00000363507 71 ntBASIC3.09□□□□□ -1.91
ATN1P54259 SNORA3.2-201ENST00000408221 125 ntBASIC3.09□□□□□ -1.91
ATN1P54259 RNA5SP95-201ENST00000410319 137 ntBASIC3.09□□□□□ -1.91
ATN1P54259 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
ATN1P54259 snoU13.25-201ENST00000458945 104 ntBASIC3.09□□□□□ -1.91
ATN1P54259 AL133373.1-201ENST00000497098 94 ntBASIC3.09□□□□□ -1.91
ATN1P54259 RNU1-143P-201ENST00000516296 146 ntBASIC3.09□□□□□ -1.91
ATN1P54259 U1.23-201ENST00000610293 146 ntBASIC3.09□□□□□ -1.91
ATN1P54259 RNU1-68P-201ENST00000615382 146 ntBASIC3.09□□□□□ -1.91
ATN1P54259 U1.39-201ENST00000621562 146 ntBASIC3.09□□□□□ -1.91
ATN1P54259 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
ATN1P54259 RNA5SP245-201ENST00000364239 121 ntBASIC3.08□□□□□ -1.92
ATN1P54259 MIR513A1-201ENST00000385138 129 ntBASIC3.08□□□□□ -1.92
ATN1P54259 RNA5SP217-201ENST00000515959 91 ntBASIC3.08□□□□□ -1.92
ATN1P54259 SNORA31.17-201ENST00000516953 127 ntBASIC3.08□□□□□ -1.92
ATN1P54259 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC3.08□□□□□ -1.92
ATN1P54259 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
ATN1P54259 ZNF658B-202ENST00000615961 3375 ntBASIC3.07□□□□□ -1.92
ATN1P54259 RNU6-1126P-201ENST00000384002 107 ntBASIC3.07□□□□□ -1.92
ATN1P54259 RNU6-535P-201ENST00000384722 107 ntBASIC3.07□□□□□ -1.92
ATN1P54259 RNA5SP21-201ENST00000410917 96 ntBASIC3.07□□□□□ -1.92
ATN1P54259 snoU13.15-201ENST00000459407 104 ntBASIC3.07□□□□□ -1.92
ATN1P54259 AC055731.1-201ENST00000474387 401 ntBASIC3.07□□□□□ -1.92
ATN1P54259 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
ATN1P54259 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
ATN1P54259 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
ATN1P54259 FTX-214ENST00000638437 12267 ntTSL 5 BASIC3.06□□□□□ -1.92
ATN1P54259 RNU6-698P-201ENST00000363523 107 ntBASIC3.06□□□□□ -1.92
ATN1P54259 RNU6-34P-201ENST00000364874 107 ntBASIC3.06□□□□□ -1.92
ATN1P54259 Y_RNA.330-201ENST00000365230 109 ntBASIC3.06□□□□□ -1.92
ATN1P54259 GHRLOS.1-201ENST00000610995 70 ntBASIC3.06□□□□□ -1.92
ATN1P54259 SNORD114-30-201ENST00000364448 72 ntBASIC3.05□□□□□ -1.92
ATN1P54259 RNU6-54P-201ENST00000365563 107 ntBASIC3.05□□□□□ -1.92
ATN1P54259 UBBP3-201ENST00000445497 241 ntBASIC3.05□□□□□ -1.92
ATN1P54259 SNORA40.17-201ENST00000517256 115 ntBASIC3.05□□□□□ -1.92
ATN1P54259 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.05□□□□□ -1.92
ATN1P54259 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.05□□□□□ -1.92
ATN1P54259 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC3.04□□□□□ -1.92
ATN1P54259 MIR103A2-201ENST00000362154 78 ntBASIC3.04□□□□□ -1.92
ATN1P54259 MIR548C-201ENST00000384815 97 ntBASIC3.04□□□□□ -1.92
ATN1P54259 MIR627-201ENST00000384979 97 ntBASIC3.04□□□□□ -1.92
ATN1P54259 MIR517B-201ENST00000385102 67 ntBASIC3.04□□□□□ -1.92
ATN1P54259 AL157398.1-201ENST00000452981 186 ntBASIC3.04□□□□□ -1.92
ATN1P54259 RN7SL633P-201ENST00000488974 297 ntBASIC3.04□□□□□ -1.92
ATN1P54259 RNA5SP147-201ENST00000516493 109 ntBASIC3.04□□□□□ -1.92
ATN1P54259 MIR548AG2-201ENST00000581228 64 ntBASIC3.04□□□□□ -1.92
ATN1P54259 AC008608.1-201ENST00000603910 127 ntBASIC3.04□□□□□ -1.92
ATN1P54259 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.04□□□□□ -1.92
ATN1P54259 RNA5SP289-201ENST00000362332 137 ntBASIC3.03□□□□□ -1.92
ATN1P54259 Y_RNA.250-201ENST00000364542 110 ntBASIC3.03□□□□□ -1.92
ATN1P54259 RNU6-1162P-201ENST00000384443 104 ntBASIC3.03□□□□□ -1.92
ATN1P54259 MIR545-201ENST00000385085 106 ntBASIC3.03□□□□□ -1.92
ATN1P54259 MIR125B2-201ENST00000385128 89 ntBASIC3.03□□□□□ -1.92
ATN1P54259 RNU6ATAC6P-201ENST00000408132 126 ntBASIC3.03□□□□□ -1.92
ATN1P54259 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.03□□□□□ -1.92
ATN1P54259 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
ATN1P54259 RNA5SP264-201ENST00000363115 107 ntBASIC3.02□□□□□ -1.93
ATN1P54259 MIR617-201ENST00000385030 97 ntBASIC3.02□□□□□ -1.93
ATN1P54259 AL161935.2-201ENST00000414627 60 ntBASIC3.02□□□□□ -1.93
ATN1P54259 SNORD42B-201ENST00000458893 67 ntBASIC3.02□□□□□ -1.93
ATN1P54259 RNU6-250P-201ENST00000516958 103 ntBASIC3.02□□□□□ -1.93
ATN1P54259 AL645939.4-201ENST00000604495 135 ntBASIC3.02□□□□□ -1.93
ATN1P54259 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
ATN1P54259 VTRNA1-1-201ENST00000363120 99 ntBASIC3.01□□□□□ -1.93
ATN1P54259 AC067940.1-201ENST00000458411 300 ntBASIC3.01□□□□□ -1.93
ATN1P54259 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC3□□□□□ -1.93
ATN1P54259 RNU7-174P-201ENST00000516248 59 ntBASIC3□□□□□ -1.93
ATN1P54259 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.99□□□□□ -1.93
ATN1P54259 snoU13.21-201ENST00000459368 105 ntBASIC2.99□□□□□ -1.93
ATN1P54259 AC021146.9-201ENST00000512503 156 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 258.9 ms