Protein–RNA interactions for Protein: P31431

SDC4, Syndecan-4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC4P31431 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC-1.85□□□□□ -2.71
SDC4P31431 RNU6-664P-201ENST00000362381 107 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 Y_RNA.89-201ENST00000363031 102 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 SNORD114-4-201ENST00000363962 75 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 RNU6-728P-201ENST00000365375 104 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 AC138393.2-201ENST00000414742 246 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 AC099799.1-201ENST00000439809 192 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 SNORD63.1-201ENST00000516178 80 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 AP002392.1-201ENST00000537692 208 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 RPS29P30-201ENST00000600975 111 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 AL445584.3-201ENST00000617173 78 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 AC090617.8-201ENST00000623339 167 ntBASIC-1.86□□□□□ -2.71
SDC4P31431 Y_RNA.41-201ENST00000362646 102 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 RNU6-211P-201ENST00000384047 107 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 MIR29B1-201ENST00000385015 81 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 MIR616-201ENST00000385293 97 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 MIR216B-201ENST00000390186 82 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 RNU6-510P-201ENST00000391239 108 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 RNU7-123P-201ENST00000515911 60 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 MIR5591-201ENST00000578248 65 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 MIR4308-201ENST00000580634 81 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 YWHAEP3-201ENST00000582767 121 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 AC073869.6-201ENST00000640656 341 ntBASIC-1.87□□□□□ -2.71
SDC4P31431 Y_RNA.78-201ENST00000362970 110 ntBASIC-1.88□□□□□ -2.71
SDC4P31431 RNU6-576P-201ENST00000390854 102 ntBASIC-1.88□□□□□ -2.71
SDC4P31431 RNU6-314P-201ENST00000516574 104 ntBASIC-1.88□□□□□ -2.71
SDC4P31431 RNU6-647P-201ENST00000364243 107 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 SNORA63.6-201ENST00000364921 119 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 SNORD77B-201ENST00000391112 67 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 RNU4-61P-201ENST00000411243 107 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 MTATP6P19-201ENST00000413797 659 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 RNU7-164P-201ENST00000459221 62 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 RNU6-240P-201ENST00000516098 97 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 SNORD116-25-201ENST00000516517 92 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 MIR4520-1-201ENST00000582609 70 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 AL353803.5-201ENST00000599815 141 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 MIR6129-201ENST00000616087 109 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 MIR4320-201ENST00000636981 65 ntBASIC-1.89□□□□□ -2.71
SDC4P31431 MT-ATP8-201ENST00000361851 207 ntAPPRIS P1 BASIC-1.9□□□□□ -2.71
SDC4P31431 RNU6-235P-201ENST00000362644 107 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 RNU4-90P-201ENST00000362773 141 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 Y_RNA.57-201ENST00000362806 113 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 Y_RNA.80-201ENST00000362996 102 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 Y_RNA.485-201ENST00000384395 102 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 Y_RNA.541-201ENST00000384640 113 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 MIR451A-201ENST00000385059 72 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 SNORA79-201ENST00000408376 140 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 RNU6-935P-201ENST00000410371 100 ntBASIC-1.9□□□□□ -2.71
SDC4P31431 SNORD81.2-201ENST00000365153 76 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 Y_RNA.452-201ENST00000384202 108 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 Y_RNA.496-201ENST00000384444 101 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 Y_RNA.661-201ENST00000516003 99 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 RNA5SP236-201ENST00000516169 116 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 Y_RNA.713-201ENST00000517013 96 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 AC021443.1-201ENST00000604478 211 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 MIR376A1-201ENST00000616574 68 ntBASIC-1.91□□□□□ -2.72
SDC4P31431 RNY4P14-201ENST00000363656 96 ntBASIC-1.92□□□□□ -2.72
SDC4P31431 RNU6-1052P-201ENST00000411398 104 ntBASIC-1.92□□□□□ -2.72
SDC4P31431 RNU6-719P-201ENST00000516671 104 ntBASIC-1.92□□□□□ -2.72
SDC4P31431 RNU4ATAC9P-201ENST00000517146 126 ntBASIC-1.92□□□□□ -2.72
SDC4P31431 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC-1.92□□□□□ -2.72
SDC4P31431 AC103591.3-201ENST00000608684 209 ntBASIC-1.92□□□□□ -2.72
SDC4P31431 AC091912.2-201ENST00000624798 167 ntBASIC-1.92□□□□□ -2.72
SDC4P31431 MIR5690-201ENST00000583739 73 ntBASIC-1.93□□□□□ -2.72
SDC4P31431 SNORD58B-201ENST00000607313 66 ntBASIC-1.93□□□□□ -2.72
SDC4P31431 AC104985.2-201ENST00000620598 500 ntBASIC-1.93□□□□□ -2.72
SDC4P31431 MIR6874-201ENST00000635894 71 ntBASIC-1.93□□□□□ -2.72
SDC4P31431 SNORA25.1-201ENST00000362326 128 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 RNA5SP26-201ENST00000362406 119 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 Y_RNA.52-201ENST00000362760 96 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 Y_RNA.64-201ENST00000362845 102 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 Y_RNA.173-201ENST00000363776 113 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 RNU6-226P-201ENST00000363778 107 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 RNU6-990P-201ENST00000364385 104 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 Y_RNA.554-201ENST00000384672 102 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 RNU6-1104P-201ENST00000384723 104 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 SNORA26.4-201ENST00000391188 123 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 RNU4-43P-201ENST00000410628 137 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.94□□□□□ -2.72
SDC4P31431 Y_RNA.31-201ENST00000362574 102 ntBASIC-1.95□□□□□ -2.72
SDC4P31431 RNA5SP266-201ENST00000410273 108 ntBASIC-1.95□□□□□ -2.72
SDC4P31431 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.95□□□□□ -2.72
SDC4P31431 RNU6-506P-201ENST00000516553 94 ntBASIC-1.95□□□□□ -2.72
SDC4P31431 AC138907.4-201ENST00000570107 226 ntBASIC-1.95□□□□□ -2.72
SDC4P31431 U6.96-201ENST00000636425 70 ntBASIC-1.95□□□□□ -2.72
SDC4P31431 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 Y_RNA.114-201ENST00000363265 113 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 SNORD115-33-201ENST00000363723 82 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 SNORD115-22-201ENST00000364456 82 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 RNU4-24P-201ENST00000364565 139 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 SNORD115-46-201ENST00000390982 71 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 Y_RNA.635-201ENST00000459041 101 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 RNU7-30P-201ENST00000516835 62 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 MIR6502-201ENST00000617296 76 ntBASIC-1.96□□□□□ -2.72
SDC4P31431 RNU6-290P-201ENST00000365212 101 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 Y_RNA.428-201ENST00000384078 102 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 Y_RNA.463-201ENST00000384271 102 ntBASIC-1.97□□□□□ -2.72
SDC4P31431 RNU6-1109P-201ENST00000391187 107 ntBASIC-1.97□□□□□ -2.72
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms