Protein–RNA interactions for Protein: A0A0B4J238

TRAV1-2, T-cell receptor alpha variable 1-2 (Fragment), humanhuman

Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-2A0A0B4J238 SNORD113-5-201ENST00000607261 78 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 PISRT1.1-201ENST00000616930 107 ntBASIC-1.93□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-664P-201ENST00000362381 107 ntBASIC-1.94□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-235P-201ENST00000362644 107 ntBASIC-1.94□□□□□ -2.72
TRAV1-2A0A0B4J238 SNORA2.1-201ENST00000363089 137 ntBASIC-1.94□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-957P-201ENST00000363652 99 ntBASIC-1.94□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-1090P-201ENST00000364065 94 ntBASIC-1.94□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.677-201ENST00000516401 85 ntBASIC-1.94□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-164P-201ENST00000364604 103 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.299-201ENST00000364973 94 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 SNORD101-201ENST00000384027 73 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.556-201ENST00000384677 113 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-373P-201ENST00000411247 98 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-559P-201ENST00000516151 98 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 AL050303.3-201ENST00000613704 284 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 MIR6874-201ENST00000635894 71 ntBASIC-1.95□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-924P-201ENST00000362926 108 ntBASIC-1.96□□□□□ -2.72
TRAV1-2A0A0B4J238 Y_RNA.339-201ENST00000365325 102 ntBASIC-1.96□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-264P-201ENST00000517134 104 ntBASIC-1.96□□□□□ -2.72
TRAV1-2A0A0B4J238 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC-1.96□□□□□ -2.72
TRAV1-2A0A0B4J238 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC-1.96□□□□□ -2.72
TRAV1-2A0A0B4J238 MIR335-201ENST00000362173 94 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-647P-201ENST00000364243 107 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 MIR624-201ENST00000385217 97 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 MIR548F5-201ENST00000408421 86 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 MIR548H1-201ENST00000408610 102 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 RNU6-584P-201ENST00000410350 95 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 AC107308.1-201ENST00000615897 301 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 AC022079.1-201ENST00000621546 602 ntBASIC-1.97□□□□□ -2.72
TRAV1-2A0A0B4J238 MTND5P26-201ENST00000426018 1752 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.143-201ENST00000363520 106 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-880P-201ENST00000384526 107 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 MIR34C-201ENST00000384831 77 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 U3.27-201ENST00000391237 200 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 MIR548H3-201ENST00000408771 118 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-935P-201ENST00000410371 100 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 AC096644.2-201ENST00000429278 159 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 AL731563.1-201ENST00000442202 214 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 IGHVII-40-1-201ENST00000517316 58 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 VN1R91P-201ENST00000594377 169 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 AL603755.1-201ENST00000619504 163 ntBASIC-1.98□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.145-201ENST00000363527 102 ntBASIC-1.99□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.157-201ENST00000363638 102 ntBASIC-1.99□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.199-201ENST00000364014 102 ntBASIC-1.99□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.99□□□□□ -2.73
TRAV1-2A0A0B4J238 AC107399.1-201ENST00000451226 265 ntBASIC-1.99□□□□□ -2.73
TRAV1-2A0A0B4J238 MIR1321-201ENST00000637766 79 ntBASIC-1.99□□□□□ -2.73
TRAV1-2A0A0B4J238 AC073869.6-201ENST00000640656 341 ntBASIC-1.99□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-228P-201ENST00000362700 106 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.88-201ENST00000363029 99 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 SNORD115-22-201ENST00000364456 82 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-102P-201ENST00000384485 104 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.526-201ENST00000384572 110 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 SNORD77B-201ENST00000391112 67 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 MTATP6P19-201ENST00000413797 659 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-1213P-201ENST00000517075 94 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 AC090617.8-201ENST00000623339 167 ntBASIC-2□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.54-201ENST00000362766 105 ntBASIC-2.01□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.152-201ENST00000363578 100 ntBASIC-2.01□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-704P-201ENST00000364162 103 ntBASIC-2.01□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.314-201ENST00000365114 102 ntBASIC-2.01□□□□□ -2.73
TRAV1-2A0A0B4J238 AC108081.1-201ENST00000604358 221 ntBASIC-2.01□□□□□ -2.73
TRAV1-2A0A0B4J238 AC084782.3-201ENST00000612282 578 ntBASIC-2.01□□□□□ -2.73
TRAV1-2A0A0B4J238 DLEU2_2.2-201ENST00000615474 90 ntBASIC-2.01□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.162-201ENST00000363683 102 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.176-201ENST00000363815 109 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-978P-201ENST00000364371 103 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-616P-201ENST00000384353 107 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-956P-201ENST00000458868 103 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.633-201ENST00000459107 95 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-561P-201ENST00000516222 102 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.695-201ENST00000516715 107 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.698-201ENST00000516798 118 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU6-453P-201ENST00000516819 85 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 AP002392.1-201ENST00000537692 208 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 DLEU2_1.1-201ENST00000612089 120 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 DLEU2_1.2-201ENST00000614667 120 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 snoU18.1-201ENST00000629629 71 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 U6.96-201ENST00000636425 70 ntBASIC-2.02□□□□□ -2.73
TRAV1-2A0A0B4J238 MIR451A-201ENST00000385059 72 ntBASIC-2.03□□□□□ -2.73
TRAV1-2A0A0B4J238 MIR1207-201ENST00000408249 87 ntBASIC-2.03□□□□□ -2.73
TRAV1-2A0A0B4J238 AC138393.2-201ENST00000414742 246 ntBASIC-2.03□□□□□ -2.73
TRAV1-2A0A0B4J238 RNU4ATAC7P-201ENST00000516280 125 ntBASIC-2.03□□□□□ -2.73
TRAV1-2A0A0B4J238 Y_RNA.217-201ENST00000364214 105 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-690P-201ENST00000365242 106 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.569-201ENST00000384749 103 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 MIR487B-201ENST00000385021 84 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 MIR616-201ENST00000385293 97 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 AL078595.1-201ENST00000404458 226 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 RNU6-370P-201ENST00000411008 104 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.641-201ENST00000459414 105 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 MIR4723-201ENST00000585070 81 ntBASIC-2.04□□□□□ -2.74
TRAV1-2A0A0B4J238 Y_RNA.223-201ENST00000364290 113 ntBASIC-2.05□□□□□ -2.74
TRAV1-2A0A0B4J238 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.05□□□□□ -2.74
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms