Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR6516-201ENST00000630554 81 ntBASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.47□□□□□ -2.17
SLC44A3Q8N4M1 MIR30D-201ENST00000362283 70 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 RNA5SP264-201ENST00000363115 107 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 SNORD38.1-201ENST00000363863 68 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-396P-201ENST00000365369 105 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.467-201ENST00000384297 102 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1237P-201ENST00000384777 107 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 MIR588-201ENST00000384900 83 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 AC079140.2-201ENST00000506193 142 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.659-201ENST00000515994 113 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 RNU11-2P-201ENST00000516898 142 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 MIR3664-201ENST00000579074 99 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 MIR4439-201ENST00000583746 80 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 U7.3-201ENST00000616123 62 ntBASIC1.46□□□□□ -2.18
SLC44A3Q8N4M1 MIR96-201ENST00000362288 78 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.36-201ENST00000362602 112 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1163P-201ENST00000364516 107 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-447P-201ENST00000410293 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1118P-201ENST00000410382 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1076P-201ENST00000410397 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-613P-201ENST00000410412 108 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-355P-201ENST00000410427 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-791P-201ENST00000410467 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-705P-201ENST00000410601 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1100P-201ENST00000410691 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-860P-201ENST00000410860 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1217P-201ENST00000411276 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-785P-201ENST00000411324 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RPL39P39-201ENST00000455840 151 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RNU7-48P-201ENST00000458875 63 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 RPL30P7-201ENST00000479312 323 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 MIR2115-201ENST00000516657 100 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 U6.90-201ENST00000614007 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 U6.70-201ENST00000620287 104 ntBASIC1.45□□□□□ -2.18
SLC44A3Q8N4M1 AP000648.3-201ENST00000623539 4507 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 SNORD33-201ENST00000362761 85 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-654P-201ENST00000364373 107 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 RNA5SP237-201ENST00000410414 113 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 RPS27P16-201ENST00000425758 201 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 AC109327.2-201ENST00000448339 378 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 RNU1-98P-201ENST00000458992 160 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 AC023790.1-201ENST00000482174 347 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-947P-201ENST00000516264 106 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 AL512310.8-201ENST00000550183 120 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 AP000753.3-201ENST00000604083 169 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 AC096720.1-201ENST00000604441 183 ntBASIC1.44□□□□□ -2.18
SLC44A3Q8N4M1 MIR103A2-201ENST00000362154 78 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-865P-201ENST00000364772 107 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-580P-201ENST00000365159 107 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-205P-201ENST00000390858 107 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1165P-201ENST00000410119 107 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.705-201ENST00000516862 110 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 AC022709.1-201ENST00000615967 87 ntBASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.43□□□□□ -2.18
SLC44A3Q8N4M1 HSBP1P2-201ENST00000299671 229 ntBASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1244P-201ENST00000363614 108 ntBASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.168-201ENST00000363740 102 ntBASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 RPS29P28-201ENST00000446439 141 ntBASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 RNU7-62P-201ENST00000458856 62 ntBASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 AC026421.1-201ENST00000519101 163 ntBASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 AP001362.1-201ENST00000625165 124 ntBASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.98-201ENST00000363109 102 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.173-201ENST00000363776 113 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 RNY1P2-201ENST00000364820 117 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1065P-201ENST00000384513 106 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 U8.15-201ENST00000390947 134 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 RNA5SP95-201ENST00000410319 137 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-887P-201ENST00000410660 100 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 RNY4P29-201ENST00000410801 97 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-1054P-201ENST00000411293 104 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 RNU6-162P-201ENST00000516228 103 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 AC138749.4-201ENST00000563970 127 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 MIR3937-201ENST00000580135 106 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 AC062037.1-201ENST00000605302 128 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 AC008163.1-202ENST00000636004 2889 ntBASIC1.41□□□□□ -2.18
SLC44A3Q8N4M1 Y_RNA.96-201ENST00000363092 109 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 RNU1-93P-201ENST00000364704 169 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.388-201ENST00000383919 113 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-813P-201ENST00000384691 107 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 MT-TF-201ENST00000387314 71 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-972P-201ENST00000391208 107 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 RNU1-78P-201ENST00000391248 165 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 MIR548G-201ENST00000408442 89 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.593-201ENST00000410292 98 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 RNU6ATAC17P-201ENST00000516074 71 ntBASIC1.4□□□□□ -2.19
SLC44A3Q8N4M1 AC020891.4-201ENST00000605745 93 ntBASIC1.39□□□□□ -2.19
SLC44A3Q8N4M1 Y_RNA.363-201ENST00000365529 113 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 MIR598-201ENST00000384868 97 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 MIR320A-201ENST00000385302 82 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.38□□□□□ -2.19
SLC44A3Q8N4M1 RNU6-955P-201ENST00000410497 104 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 169 ms