Protein–RNA interactions for Protein: Q5VXU3

CHIC1, Cysteine-rich hydrophobic domain-containing protein 1, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHIC1Q5VXU3 MIR4635-201ENST00000583759 79 ntBASIC5.61□□□□□ -1.51
CHIC1Q5VXU3 MIR3651-201ENST00000630427 90 ntBASIC5.61□□□□□ -1.51
CHIC1Q5VXU3 MIR938-201ENST00000401216 83 ntBASIC5.6□□□□□ -1.51
CHIC1Q5VXU3 MIR4529-201ENST00000578110 78 ntBASIC5.6□□□□□ -1.51
CHIC1Q5VXU3 MIR4676-201ENST00000583078 72 ntBASIC5.6□□□□□ -1.51
CHIC1Q5VXU3 AC027335.2-201ENST00000624030 375 ntBASIC5.6□□□□□ -1.51
CHIC1Q5VXU3 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC5.6□□□□□ -1.51
CHIC1Q5VXU3 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC5.59□□□□□ -1.51
CHIC1Q5VXU3 SNORA15B-2-201ENST00000384058 135 ntBASIC5.59□□□□□ -1.51
CHIC1Q5VXU3 SNORA15B-1-201ENST00000384334 135 ntBASIC5.59□□□□□ -1.51
CHIC1Q5VXU3 MIR4298-201ENST00000584380 73 ntBASIC5.59□□□□□ -1.51
CHIC1Q5VXU3 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
CHIC1Q5VXU3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
CHIC1Q5VXU3 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 RNU1-143P-201ENST00000516296 146 ntBASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 MIR548AL-201ENST00000578416 97 ntBASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 MIR2682-201ENST00000580305 110 ntBASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 MIR4276-201ENST00000584832 70 ntBASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 U1.23-201ENST00000610293 146 ntBASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 RNU1-68P-201ENST00000615382 146 ntBASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 U1.39-201ENST00000621562 146 ntBASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 CCDC73-201ENST00000335185 3849 ntAPPRIS P2 TSL 2 BASIC5.58□□□□□ -1.52
CHIC1Q5VXU3 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC5.57□□□□□ -1.52
CHIC1Q5VXU3 RPS26P5-201ENST00000418544 335 ntBASIC5.57□□□□□ -1.52
CHIC1Q5VXU3 VTRNA2-2P-201ENST00000516091 103 ntBASIC5.57□□□□□ -1.52
CHIC1Q5VXU3 MIR4490-201ENST00000582647 84 ntBASIC5.57□□□□□ -1.52
CHIC1Q5VXU3 MIR4658-201ENST00000584344 65 ntBASIC5.57□□□□□ -1.52
CHIC1Q5VXU3 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHIC1Q5VXU3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
CHIC1Q5VXU3 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
CHIC1Q5VXU3 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
CHIC1Q5VXU3 SNORA25.8-201ENST00000364831 128 ntBASIC5.56□□□□□ -1.52
CHIC1Q5VXU3 AC005326.1-201ENST00000429197 123 ntBASIC5.56□□□□□ -1.52
CHIC1Q5VXU3 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC5.56□□□□□ -1.52
CHIC1Q5VXU3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.56□□□□□ -1.52
CHIC1Q5VXU3 SNORD114-4-201ENST00000363962 75 ntBASIC5.55□□□□□ -1.52
CHIC1Q5VXU3 AC115115.1-201ENST00000449927 248 ntBASIC5.55□□□□□ -1.52
CHIC1Q5VXU3 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
CHIC1Q5VXU3 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
CHIC1Q5VXU3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
CHIC1Q5VXU3 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
CHIC1Q5VXU3 RNU7-102P-201ENST00000458948 62 ntBASIC5.54□□□□□ -1.52
CHIC1Q5VXU3 uc_338.1-201ENST00000612113 180 ntBASIC5.54□□□□□ -1.52
CHIC1Q5VXU3 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC5.54□□□□□ -1.52
CHIC1Q5VXU3 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
CHIC1Q5VXU3 MT-TY-201ENST00000387409 66 ntBASIC5.52□□□□□ -1.53
CHIC1Q5VXU3 IGKV1OR2-6-201ENST00000603485 277 ntBASIC5.52□□□□□ -1.53
CHIC1Q5VXU3 MIR7112-201ENST00000616126 65 ntBASIC5.52□□□□□ -1.53
CHIC1Q5VXU3 RNU6-172P-201ENST00000411000 93 ntBASIC5.51□□□□□ -1.53
CHIC1Q5VXU3 RNU6-924P-201ENST00000362926 108 ntBASIC5.5□□□□□ -1.53
CHIC1Q5VXU3 RN7SL633P-201ENST00000488974 297 ntBASIC5.5□□□□□ -1.53
CHIC1Q5VXU3 NLGN1-206ENST00000457714 8242 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHIC1Q5VXU3 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC5.5□□□□□ -1.53
CHIC1Q5VXU3 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CHIC1Q5VXU3 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 Y_RNA.174-201ENST00000363781 105 ntBASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 RNU6-439P-201ENST00000384188 106 ntBASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 SNORA67.3-201ENST00000384366 140 ntBASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 AC036111.3-201ENST00000526389 112 ntBASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CHIC1Q5VXU3 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CHIC1Q5VXU3 HMGN1P18-201ENST00000457642 277 ntBASIC5.48□□□□□ -1.53
CHIC1Q5VXU3 RNU1-123P-201ENST00000458950 160 ntBASIC5.48□□□□□ -1.53
CHIC1Q5VXU3 AC138207.3-201ENST00000585289 166 ntBASIC5.48□□□□□ -1.53
CHIC1Q5VXU3 AC067863.3-201ENST00000624172 122 ntBASIC5.48□□□□□ -1.53
CHIC1Q5VXU3 Y_RNA.74-201ENST00000362911 99 ntBASIC5.47□□□□□ -1.53
CHIC1Q5VXU3 Y_RNA.633-201ENST00000459107 95 ntBASIC5.47□□□□□ -1.53
CHIC1Q5VXU3 AC245166.1-201ENST00000521012 253 ntBASIC5.47□□□□□ -1.53
CHIC1Q5VXU3 MIR4460-201ENST00000577862 86 ntBASIC5.47□□□□□ -1.53
CHIC1Q5VXU3 AC073476.4-201ENST00000628409 72 ntBASIC5.47□□□□□ -1.53
CHIC1Q5VXU3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
CHIC1Q5VXU3 SNORA31.14-201ENST00000516728 116 ntBASIC5.46□□□□□ -1.54
CHIC1Q5VXU3 Y_RNA.32-201ENST00000362589 110 ntBASIC5.45□□□□□ -1.54
CHIC1Q5VXU3 MIR527-201ENST00000385244 85 ntBASIC5.45□□□□□ -1.54
CHIC1Q5VXU3 RNA5SP120-201ENST00000410900 112 ntBASIC5.45□□□□□ -1.54
CHIC1Q5VXU3 RNU4ATAC4P-201ENST00000516307 126 ntBASIC5.45□□□□□ -1.54
CHIC1Q5VXU3 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CHIC1Q5VXU3 RNU7-40P-201ENST00000516397 64 ntBASIC5.44□□□□□ -1.54
CHIC1Q5VXU3 SNORA31.25-201ENST00000517242 134 ntBASIC5.44□□□□□ -1.54
CHIC1Q5VXU3 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC5.43□□□□□ -1.54
CHIC1Q5VXU3 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CHIC1Q5VXU3 SNORD56.5-201ENST00000364281 72 ntBASIC5.42□□□□□ -1.54
CHIC1Q5VXU3 SNORD111-201ENST00000408139 94 ntBASIC5.42□□□□□ -1.54
CHIC1Q5VXU3 RPL23AP94-201ENST00000512518 302 ntBASIC5.42□□□□□ -1.54
CHIC1Q5VXU3 MIR6852-201ENST00000621699 66 ntBASIC5.41□□□□□ -1.54
CHIC1Q5VXU3 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
CHIC1Q5VXU3 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC5.4□□□□□ -1.54
CHIC1Q5VXU3 SNORD56.3-201ENST00000363507 71 ntBASIC5.4□□□□□ -1.54
CHIC1Q5VXU3 Y_RNA.282-201ENST00000364793 102 ntBASIC5.4□□□□□ -1.54
CHIC1Q5VXU3 uc_338.16-201ENST00000621804 95 ntBASIC5.4□□□□□ -1.54
CHIC1Q5VXU3 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
CHIC1Q5VXU3 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
CHIC1Q5VXU3 GNPDA2-204ENST00000509756 5382 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
CHIC1Q5VXU3 RNU6-822P-201ENST00000362707 106 ntBASIC5.39□□□□□ -1.55
CHIC1Q5VXU3 SNORD1B-201ENST00000363091 84 ntBASIC5.39□□□□□ -1.55
CHIC1Q5VXU3 SNORA38.1-201ENST00000364172 131 ntBASIC5.39□□□□□ -1.55
CHIC1Q5VXU3 SNORA6-201ENST00000384033 151 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 189.2 ms