Protein–RNA interactions for Protein: Q01094

E2F1, Transcription factor E2F1, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1Q01094 SNORD12-201ENST00000391002 90 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 RNU6-972P-201ENST00000391208 107 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 MTATP8P2-201ENST00000435212 202 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 RNA5SP395-201ENST00000516567 118 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 AC036111.3-201ENST00000526389 112 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 AC020891.4-201ENST00000605745 93 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 uc_338.6-201ENST00000613544 171 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 AC012531.4-201ENST00000616509 177 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 MALAT1.1-201ENST00000618249 95 ntBASIC1.24□□□□□ -2.21
E2F1Q01094 Y_RNA.73-201ENST00000362910 113 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 SNORD113.3-201ENST00000364630 78 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 RNY1P13-201ENST00000365030 105 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 SNORA2B-201ENST00000384583 137 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 MIR605-201ENST00000385078 83 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 MRPL35P3-201ENST00000421557 364 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 RNU7-90P-201ENST00000459216 62 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 AC004223.1-201ENST00000479840 271 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 RNU6-795P-201ENST00000516323 103 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 FAM71BP1-201ENST00000604431 523 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 AL442128.1-201ENST00000615151 90 ntBASIC1.23□□□□□ -2.21
E2F1Q01094 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.22□□□□□ -2.21
E2F1Q01094 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.22□□□□□ -2.21
E2F1Q01094 Y_RNA.247-201ENST00000364500 92 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 RNU6-616P-201ENST00000384353 107 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 SNORA25-201ENST00000384384 134 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 MIR577-201ENST00000385196 96 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 MT-TF-201ENST00000387314 71 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 SNORA26.2-201ENST00000390922 122 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 RNU6-679P-201ENST00000391003 106 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 MIR1302-4-201ENST00000408701 150 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 RNA5SP225-201ENST00000410874 135 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 RNU6-267P-201ENST00000516714 103 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 AC141557.1-201ENST00000540982 400 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 MIR4777-201ENST00000583710 86 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 AC106800.4-201ENST00000614905 153 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 AC012676.2-201ENST00000619258 186 ntBASIC1.22□□□□□ -2.21
E2F1Q01094 MIR494-201ENST00000349529 81 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 MIR96-201ENST00000362288 78 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6-1099P-201ENST00000363533 107 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU1-93P-201ENST00000364704 169 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6-949P-201ENST00000384040 107 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6-1152P-201ENST00000384576 107 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 MIR758-201ENST00000390227 88 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6-644P-201ENST00000391155 98 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6-162P-201ENST00000516228 103 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6-412P-201ENST00000516434 106 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU7-137P-201ENST00000516788 62 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 AC023827.1-201ENST00000569247 97 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.21□□□□□ -2.22
E2F1Q01094 AL589743.1-201ENST00000551932 2712 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 AC008163.1-202ENST00000636004 2889 ntBASIC1.21□□□□□ -2.22
E2F1Q01094 RNU6-228P-201ENST00000362700 106 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 Y_RNA.190-201ENST00000363964 101 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
E2F1Q01094 SNORD111-201ENST00000408139 94 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 ATP6V0E1P1-201ENST00000412537 226 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 MIR18B-201ENST00000454574 71 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 RN7SKP12-201ENST00000516275 143 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 SNORD67.1-201ENST00000516618 108 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 AC027335.2-201ENST00000624030 375 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 AL162726.3-218ENST00000636401 95 ntBASIC1.2□□□□□ -2.22
E2F1Q01094 SNORD114-10-201ENST00000363409 72 ntBASIC1.19□□□□□ -2.22
E2F1Q01094 Y_RNA.467-201ENST00000384297 102 ntBASIC1.19□□□□□ -2.22
E2F1Q01094 MIR222-201ENST00000384992 110 ntBASIC1.19□□□□□ -2.22
E2F1Q01094 snoU13.21-201ENST00000459368 105 ntBASIC1.19□□□□□ -2.22
E2F1Q01094 UBL5P1-201ENST00000507979 193 ntBASIC1.19□□□□□ -2.22
E2F1Q01094 RNU7-61P-201ENST00000515897 61 ntBASIC1.19□□□□□ -2.22
E2F1Q01094 SNORA40.13-201ENST00000516379 120 ntBASIC1.19□□□□□ -2.22
E2F1Q01094 Y_RNA.49-201ENST00000362714 112 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 RNU6-363P-201ENST00000362895 105 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 MIR206-201ENST00000384872 86 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 RNU6-816P-201ENST00000390914 107 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 RNU6-1268P-201ENST00000391214 107 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 RNU6-1239P-201ENST00000391310 107 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 MIR1912-201ENST00000410389 80 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 AC002429.1-201ENST00000437672 148 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 AC087343.1-201ENST00000477341 475 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 AC026421.1-201ENST00000519101 163 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 MIR4295-201ENST00000585286 85 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.18□□□□□ -2.22
E2F1Q01094 Y_RNA.17-201ENST00000362433 111 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNY3P2-201ENST00000362918 102 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 Y_RNA.78-201ENST00000362970 110 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNU6-1125P-201ENST00000363601 107 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNU4-67P-201ENST00000364569 141 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 SNORD115-35-201ENST00000365122 82 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNU6-497P-201ENST00000365316 104 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 Y_RNA.360-201ENST00000365512 102 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 Y_RNA.558-201ENST00000384685 113 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 MIR1302-5-201ENST00000408164 150 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNU7-2P-201ENST00000516096 62 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNU6-1006P-201ENST00000516998 103 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNU6-158P-201ENST00000517104 100 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 AC087277.2-201ENST00000533203 151 ntTSL 5 BASIC1.17□□□□□ -2.22
E2F1Q01094 U7.3-201ENST00000616123 62 ntBASIC1.17□□□□□ -2.22
E2F1Q01094 RNU6-170P-201ENST00000362832 104 ntBASIC1.16□□□□□ -2.22
E2F1Q01094 RNU6-219P-201ENST00000364728 107 ntBASIC1.16□□□□□ -2.22
E2F1Q01094 Y_RNA.507-201ENST00000384500 99 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms