Protein–RNA interactions for Protein: P04198

MYCN, N-myc proto-oncogene protein, humanhuman

Predicted RBP Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MYCNP04198 MIR6509-201ENST00000614603 85 ntBASIC3.65□□□□□ -1.83
MYCNP04198 MIR449A-201ENST00000362113 91 ntBASIC3.64□□□□□ -1.83
MYCNP04198 RNA5SP492-201ENST00000411330 114 ntBASIC3.64□□□□□ -1.83
MYCNP04198 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.64□□□□□ -1.83
MYCNP04198 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
MYCNP04198 RNU6-1039P-201ENST00000383931 107 ntBASIC3.63□□□□□ -1.83
MYCNP04198 AC073869.9-201ENST00000641610 120 ntBASIC3.63□□□□□ -1.83
MYCNP04198 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
MYCNP04198 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
MYCNP04198 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
MYCNP04198 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
MYCNP04198 RNU7-24P-201ENST00000458867 62 ntBASIC3.62□□□□□ -1.83
MYCNP04198 RN7SL499P-201ENST00000481141 276 ntBASIC3.62□□□□□ -1.83
MYCNP04198 AL645939.4-201ENST00000604495 135 ntBASIC3.62□□□□□ -1.83
MYCNP04198 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
MYCNP04198 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MYCNP04198 SNORD67-201ENST00000390833 111 ntBASIC3.61□□□□□ -1.83
MYCNP04198 RNU7-13P-201ENST00000516413 62 ntBASIC3.61□□□□□ -1.83
MYCNP04198 AC008608.1-201ENST00000603910 127 ntBASIC3.61□□□□□ -1.83
MYCNP04198 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MYCNP04198 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
MYCNP04198 RNA5SP276-201ENST00000362580 94 ntBASIC3.6□□□□□ -1.83
MYCNP04198 MIR203A-201ENST00000384836 110 ntBASIC3.6□□□□□ -1.83
MYCNP04198 RNA5SP212-201ENST00000391223 107 ntBASIC3.6□□□□□ -1.83
MYCNP04198 RNU6-808P-201ENST00000391233 108 ntBASIC3.6□□□□□ -1.83
MYCNP04198 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC3.6□□□□□ -1.83
MYCNP04198 uc_338.1-201ENST00000612113 180 ntBASIC3.6□□□□□ -1.83
MYCNP04198 MIR7978-201ENST00000636158 59 ntBASIC3.6□□□□□ -1.83
MYCNP04198 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
MYCNP04198 SNORA71.1-201ENST00000364523 117 ntBASIC3.59□□□□□ -1.83
MYCNP04198 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
MYCNP04198 MIR887-201ENST00000401258 79 ntBASIC3.59□□□□□ -1.83
MYCNP04198 AC244505.6-201ENST00000452829 130 ntBASIC3.59□□□□□ -1.83
MYCNP04198 SCARNA21.1-201ENST00000515996 128 ntBASIC3.59□□□□□ -1.83
MYCNP04198 SNORA77B-201ENST00000578179 125 ntBASIC3.59□□□□□ -1.83
MYCNP04198 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC3.59□□□□□ -1.83
MYCNP04198 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.84
MYCNP04198 MIR30E-201ENST00000362104 92 ntBASIC3.58□□□□□ -1.84
MYCNP04198 RNU6-369P-201ENST00000362515 102 ntBASIC3.58□□□□□ -1.84
MYCNP04198 SNORD113.3-201ENST00000364630 78 ntBASIC3.58□□□□□ -1.84
MYCNP04198 NAMPTP3-201ENST00000569273 224 ntBASIC3.58□□□□□ -1.84
MYCNP04198 MIR3664-201ENST00000579074 99 ntBASIC3.58□□□□□ -1.84
MYCNP04198 MIR4672-201ENST00000583126 81 ntBASIC3.58□□□□□ -1.84
MYCNP04198 MIR8063-201ENST00000621930 81 ntBASIC3.58□□□□□ -1.84
MYCNP04198 ZNF260-205ENST00000593142 4047 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
MYCNP04198 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MYCNP04198 RNU6-495P-201ENST00000362995 107 ntBASIC3.57□□□□□ -1.84
MYCNP04198 Y_RNA.330-201ENST00000365230 109 ntBASIC3.57□□□□□ -1.84
MYCNP04198 RNU1-52P-201ENST00000384190 164 ntBASIC3.57□□□□□ -1.84
MYCNP04198 RNU6-364P-201ENST00000384387 107 ntBASIC3.57□□□□□ -1.84
MYCNP04198 MIR216B-201ENST00000390186 82 ntBASIC3.57□□□□□ -1.84
MYCNP04198 EEF1A1P41-201ENST00000414667 207 ntBASIC3.57□□□□□ -1.84
MYCNP04198 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
MYCNP04198 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MYCNP04198 SNORA67.3-201ENST00000384366 140 ntBASIC3.56□□□□□ -1.84
MYCNP04198 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.56□□□□□ -1.84
MYCNP04198 RPL23AP42-201ENST00000471152 471 ntBASIC3.56□□□□□ -1.84
MYCNP04198 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MYCNP04198 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
MYCNP04198 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.55□□□□□ -1.84
MYCNP04198 RNU6-645P-201ENST00000364649 106 ntBASIC3.55□□□□□ -1.84
MYCNP04198 AL359511.1-201ENST00000402970 211 ntBASIC3.55□□□□□ -1.84
MYCNP04198 MIR2682-201ENST00000580305 110 ntBASIC3.55□□□□□ -1.84
MYCNP04198 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MYCNP04198 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
MYCNP04198 MIR8074-201ENST00000615081 81 ntBASIC3.54□□□□□ -1.84
MYCNP04198 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MYCNP04198 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.53□□□□□ -1.84
MYCNP04198 SNORD15B-201ENST00000384714 146 ntBASIC3.53□□□□□ -1.84
MYCNP04198 RNA5SP356-201ENST00000515972 94 ntBASIC3.53□□□□□ -1.84
MYCNP04198 AC245166.1-201ENST00000521012 253 ntBASIC3.53□□□□□ -1.84
MYCNP04198 RNU6-936P-201ENST00000384005 107 ntBASIC3.52□□□□□ -1.85
MYCNP04198 RNA5SP299-201ENST00000391203 116 ntBASIC3.52□□□□□ -1.85
MYCNP04198 MIR6715A-201ENST00000615929 79 ntBASIC3.52□□□□□ -1.85
MYCNP04198 RNA5SP383-201ENST00000362934 120 ntBASIC3.51□□□□□ -1.85
MYCNP04198 SNORA7.4-201ENST00000384249 137 ntBASIC3.51□□□□□ -1.85
MYCNP04198 AC055731.1-201ENST00000474387 401 ntBASIC3.51□□□□□ -1.85
MYCNP04198 RNU1-41P-201ENST00000516161 162 ntBASIC3.51□□□□□ -1.85
MYCNP04198 RNU1-48P-201ENST00000516400 162 ntBASIC3.51□□□□□ -1.85
MYCNP04198 SNORA64.4-201ENST00000516632 81 ntBASIC3.51□□□□□ -1.85
MYCNP04198 MIR4676-201ENST00000583078 72 ntBASIC3.51□□□□□ -1.85
MYCNP04198 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MYCNP04198 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.51□□□□□ -1.85
MYCNP04198 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
MYCNP04198 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.5□□□□□ -1.85
MYCNP04198 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.5□□□□□ -1.85
MYCNP04198 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC3.5□□□□□ -1.85
MYCNP04198 MIR22-201ENST00000362190 85 ntBASIC3.5□□□□□ -1.85
MYCNP04198 RNU6-446P-201ENST00000362827 106 ntBASIC3.5□□□□□ -1.85
MYCNP04198 SNORD56.3-201ENST00000363507 71 ntBASIC3.5□□□□□ -1.85
MYCNP04198 MIR6733-201ENST00000635723 61 ntBASIC3.5□□□□□ -1.85
MYCNP04198 RNU6-1126P-201ENST00000384002 107 ntBASIC3.49□□□□□ -1.85
MYCNP04198 RPS26P5-201ENST00000418544 335 ntBASIC3.49□□□□□ -1.85
MYCNP04198 AL513328.1-201ENST00000446460 224 ntBASIC3.49□□□□□ -1.85
MYCNP04198 AC036111.3-201ENST00000526389 112 ntBASIC3.49□□□□□ -1.85
MYCNP04198 AC104984.5-201ENST00000586878 94 ntBASIC3.49□□□□□ -1.85
MYCNP04198 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
MYCNP04198 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
MYCNP04198 MIR3657-201ENST00000584818 117 ntBASIC3.48□□□□□ -1.85
MYCNP04198 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 225.6 ms