Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 uc_338.6-201ENST00000613544 171 ntBASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.03□□□□□ -1.92
PCDHGA4Q9Y5G9 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.03□□□□□ -1.93
PCDHGA4Q9Y5G9 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.93
PCDHGA4Q9Y5G9 ANGPTL3-201ENST00000371129 2805 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU6-403P-201ENST00000363163 104 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 SNORA7.4-201ENST00000384249 137 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR194-1-201ENST00000384892 85 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 SNORA40.6-201ENST00000391153 128 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 AP004217.1-201ENST00000480579 346 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 AC008885.1-201ENST00000514930 301 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 SNORA31.17-201ENST00000516953 127 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 AL049779.4-201ENST00000604500 156 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 MTRNR2L2-201ENST00000604882 87 ntBASIC3.02□□□□□ -1.93
PCDHGA4Q9Y5G9 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
PCDHGA4Q9Y5G9 RNA5SP126-201ENST00000365092 109 ntBASIC3.01□□□□□ -1.93
PCDHGA4Q9Y5G9 SNORA46-201ENST00000384762 135 ntBASIC3.01□□□□□ -1.93
PCDHGA4Q9Y5G9 SNORD41-201ENST00000386967 70 ntBASIC3.01□□□□□ -1.93
PCDHGA4Q9Y5G9 UQCRHP3-201ENST00000451503 251 ntBASIC3.01□□□□□ -1.93
PCDHGA4Q9Y5G9 RNA5SP217-201ENST00000515959 91 ntBASIC3.01□□□□□ -1.93
PCDHGA4Q9Y5G9 AC007318.2-201ENST00000620999 243 ntBASIC3.01□□□□□ -1.93
PCDHGA4Q9Y5G9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU1-36P-201ENST00000365130 165 ntBASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU6-935P-201ENST00000410371 100 ntBASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 RN7SL274P-201ENST00000492268 272 ntBASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 AC013244.2-201ENST00000603396 103 ntBASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 AC010297.1-201ENST00000623948 149 ntBASIC3□□□□□ -1.93
PCDHGA4Q9Y5G9 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR449A-201ENST00000362113 91 ntBASIC2.99□□□□□ -1.93
PCDHGA4Q9Y5G9 Y_RNA.56-201ENST00000362798 112 ntBASIC2.99□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR4446-201ENST00000578505 67 ntBASIC2.99□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR622-201ENST00000638396 96 ntBASIC2.99□□□□□ -1.93
PCDHGA4Q9Y5G9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR377-201ENST00000362145 69 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 RNA5SP259-201ENST00000365541 109 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 SNORD15B-201ENST00000384714 146 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 SNORD88.1-201ENST00000408684 91 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU6-1052P-201ENST00000411398 104 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR18B-201ENST00000454574 71 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 RNA5SP356-201ENST00000515972 94 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU6-752P-201ENST00000516376 102 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU6-719P-201ENST00000516671 104 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR514B-201ENST00000516774 80 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.98□□□□□ -1.93
PCDHGA4Q9Y5G9 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 MIR451A-201ENST00000385059 72 ntBASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU6-274P-201ENST00000459566 107 ntBASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 RNU6-922P-201ENST00000516753 99 ntBASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 IST1-227ENST00000626438 126 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 AC016717.2-201ENST00000609089 5141 ntBASIC2.97□□□□□ -1.93
PCDHGA4Q9Y5G9 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 RNU6-1187P-201ENST00000364771 110 ntBASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR3670-2-201ENST00000582974 65 ntBASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR3670-1-201ENST00000584160 65 ntBASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR3670-3-201ENST00000584855 65 ntBASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR3670-4-201ENST00000612260 65 ntBASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 AL109933.3-201ENST00000619095 188 ntBASIC2.96□□□□□ -1.94
PCDHGA4Q9Y5G9 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 RNA5SP393-201ENST00000363423 117 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 RNU6-829P-201ENST00000363700 112 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 Y_RNA.236-201ENST00000364427 111 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 SNORA71.1-201ENST00000364523 117 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 SNORA54-201ENST00000384281 123 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR513A1-201ENST00000385138 129 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 SNORD67-201ENST00000390833 111 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 RNU6-1054P-201ENST00000411293 104 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 AC097635.1-201ENST00000450678 155 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR3162-201ENST00000581818 82 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR6516-201ENST00000630554 81 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 MIR4773-1-201ENST00000637203 78 ntBASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
PCDHGA4Q9Y5G9 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 AC009487.2-201ENST00000420969 6821 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 RNU6-654P-201ENST00000364373 107 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 RNU6-1177P-201ENST00000391058 104 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 RNU6ATAC33P-201ENST00000408647 126 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 AC022018.1-201ENST00000430685 241 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 AL691482.2-201ENST00000457453 84 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 Y_RNA.697-201ENST00000516776 113 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 GS1-279B7.1-204ENST00000641809 378 ntBASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
PCDHGA4Q9Y5G9 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.93□□□□□ -1.94
PCDHGA4Q9Y5G9 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC2.93□□□□□ -1.94
PCDHGA4Q9Y5G9 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
PCDHGA4Q9Y5G9 EEF1A1P41-201ENST00000414667 207 ntBASIC2.93□□□□□ -1.94
PCDHGA4Q9Y5G9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 228 ms