Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 AC016717.2-201ENST00000609089 5141 ntBASIC3.44□□□□□ -1.86
TRIM35Q9UPQ4 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC3.43□□□□□ -1.86
TRIM35Q9UPQ4 MIR451A-201ENST00000385059 72 ntBASIC3.43□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-1177P-201ENST00000391058 104 ntBASIC3.43□□□□□ -1.86
TRIM35Q9UPQ4 AC244098.3-201ENST00000424803 96 ntBASIC3.43□□□□□ -1.86
TRIM35Q9UPQ4 MIR548H5-201ENST00000580314 60 ntBASIC3.43□□□□□ -1.86
TRIM35Q9UPQ4 AL449363.1-201ENST00000617815 186 ntBASIC3.43□□□□□ -1.86
TRIM35Q9UPQ4 MIR101-2-201ENST00000362195 79 ntBASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-396P-201ENST00000365369 105 ntBASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 SNORA48.1-201ENST00000390879 135 ntBASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 Y_RNA.588-201ENST00000391254 102 ntBASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-322P-201ENST00000516010 103 ntBASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 AP000942.3-201ENST00000603702 160 ntBASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC3.42□□□□□ -1.86
TRIM35Q9UPQ4 MIR1283-2-201ENST00000408621 87 ntBASIC3.41□□□□□ -1.86
TRIM35Q9UPQ4 RNU7-62P-201ENST00000458856 62 ntBASIC3.41□□□□□ -1.86
TRIM35Q9UPQ4 RNU6-1057P-201ENST00000517162 102 ntBASIC3.41□□□□□ -1.86
TRIM35Q9UPQ4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC3.41□□□□□ -1.86
TRIM35Q9UPQ4 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
TRIM35Q9UPQ4 SNORD113-4-201ENST00000364802 75 ntBASIC3.4□□□□□ -1.87
TRIM35Q9UPQ4 RNU6-382P-201ENST00000365181 106 ntBASIC3.4□□□□□ -1.87
TRIM35Q9UPQ4 MIR653-201ENST00000385279 96 ntBASIC3.4□□□□□ -1.87
TRIM35Q9UPQ4 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.4□□□□□ -1.87
TRIM35Q9UPQ4 MIR3920-201ENST00000581751 86 ntBASIC3.4□□□□□ -1.87
TRIM35Q9UPQ4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC3.4□□□□□ -1.87
TRIM35Q9UPQ4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
TRIM35Q9UPQ4 AL596028.1-201ENST00000326971 197 ntBASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 RNU1-138P-201ENST00000384093 164 ntBASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 SNORA48.8-201ENST00000391324 134 ntBASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 HMGN2P3-201ENST00000433603 273 ntBASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 HMGN2P5-201ENST00000436882 273 ntBASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 SNORD111.1-201ENST00000516421 86 ntBASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC3.39□□□□□ -1.87
TRIM35Q9UPQ4 RNU6-1123P-201ENST00000362347 106 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 SNORA25.3-201ENST00000363205 127 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 RNA5SP68-201ENST00000363885 119 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 MIR591-201ENST00000385290 95 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 SNORD88.1-201ENST00000408684 91 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 MIR1302-7-201ENST00000408841 72 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 SCARNA21.1-201ENST00000515996 128 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 SNORA31.15-201ENST00000516771 132 ntBASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM35Q9UPQ4 RNA5SP465-201ENST00000391195 109 ntBASIC3.37□□□□□ -1.87
TRIM35Q9UPQ4 SNORA11.2-201ENST00000408318 127 ntBASIC3.37□□□□□ -1.87
TRIM35Q9UPQ4 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM35Q9UPQ4 RNA5SP320-201ENST00000516263 124 ntBASIC3.37□□□□□ -1.87
TRIM35Q9UPQ4 MIR3126-201ENST00000577443 74 ntBASIC3.37□□□□□ -1.87
TRIM35Q9UPQ4 uc_338.6-201ENST00000613544 171 ntBASIC3.37□□□□□ -1.87
TRIM35Q9UPQ4 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM35Q9UPQ4 Y_RNA.258-201ENST00000364613 105 ntBASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 MT-TN-201ENST00000387400 73 ntBASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 RNA5SP210-201ENST00000391034 120 ntBASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 SNORD93-201ENST00000408813 74 ntBASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 RNA5SP148-201ENST00000516527 94 ntBASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 MIR6817-201ENST00000615588 66 ntBASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 MIR6733-201ENST00000635723 61 ntBASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM35Q9UPQ4 Y_RNA.56-201ENST00000362798 112 ntBASIC3.35□□□□□ -1.87
TRIM35Q9UPQ4 MIR196B-201ENST00000384852 84 ntBASIC3.35□□□□□ -1.87
TRIM35Q9UPQ4 RNU6ATAC3P-201ENST00000387974 126 ntBASIC3.35□□□□□ -1.87
TRIM35Q9UPQ4 RNU6-1054P-201ENST00000411293 104 ntBASIC3.35□□□□□ -1.87
TRIM35Q9UPQ4 UBE2DNL-203ENST00000474922 222 ntBASIC3.35□□□□□ -1.87
TRIM35Q9UPQ4 RPL30P7-201ENST00000479312 323 ntBASIC3.35□□□□□ -1.87
TRIM35Q9UPQ4 MIR514B-201ENST00000516774 80 ntBASIC3.35□□□□□ -1.87
TRIM35Q9UPQ4 AC131280.1-202ENST00000624067 4211 ntBASIC3.34□□□□□ -1.87
TRIM35Q9UPQ4 AC097635.1-201ENST00000450678 155 ntBASIC3.34□□□□□ -1.87
TRIM35Q9UPQ4 AC013244.2-201ENST00000603396 103 ntBASIC3.34□□□□□ -1.87
TRIM35Q9UPQ4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
TRIM35Q9UPQ4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 RNU6-403P-201ENST00000363163 104 ntBASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 RNU1-91P-201ENST00000364746 163 ntBASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 U3.27-201ENST00000391237 200 ntBASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 RNU4-88P-201ENST00000411220 86 ntBASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 MIR3938-201ENST00000582157 103 ntBASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TRIM35Q9UPQ4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
TRIM35Q9UPQ4 AL365361.1-201ENST00000566942 3481 ntBASIC3.32□□□□□ -1.88
TRIM35Q9UPQ4 MIR27B-201ENST00000385129 97 ntBASIC3.32□□□□□ -1.88
TRIM35Q9UPQ4 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
TRIM35Q9UPQ4 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.32□□□□□ -1.88
TRIM35Q9UPQ4 RNU1-36P-201ENST00000365130 165 ntBASIC3.31□□□□□ -1.88
TRIM35Q9UPQ4 MIR2115-201ENST00000516657 100 ntBASIC3.31□□□□□ -1.88
TRIM35Q9UPQ4 DEFB122-202ENST00000569013 197 ntBASIC3.31□□□□□ -1.88
TRIM35Q9UPQ4 MIR4506-201ENST00000584693 77 ntBASIC3.31□□□□□ -1.88
TRIM35Q9UPQ4 MIR3192-201ENST00000584920 77 ntBASIC3.31□□□□□ -1.88
TRIM35Q9UPQ4 AL078603.1-201ENST00000603824 313 ntBASIC3.31□□□□□ -1.88
TRIM35Q9UPQ4 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
TRIM35Q9UPQ4 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
TRIM35Q9UPQ4 Y_RNA.697-201ENST00000516776 113 ntBASIC3.3□□□□□ -1.88
TRIM35Q9UPQ4 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
TRIM35Q9UPQ4 MIR449A-201ENST00000362113 91 ntBASIC3.29□□□□□ -1.88
TRIM35Q9UPQ4 RNA5SP501-201ENST00000410990 112 ntBASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 206 ms