Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 MIR7978-201ENST00000636158 59 ntBASIC2.99□□□□□ -1.93
LHX6Q9UPM6 MIR4773-1-201ENST00000637203 78 ntBASIC2.99□□□□□ -1.93
LHX6Q9UPM6 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LHX6Q9UPM6 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
LHX6Q9UPM6 RNU6-403P-201ENST00000363163 104 ntBASIC2.98□□□□□ -1.93
LHX6Q9UPM6 RNU6-203P-201ENST00000384038 104 ntBASIC2.98□□□□□ -1.93
LHX6Q9UPM6 MIR196B-201ENST00000384852 84 ntBASIC2.98□□□□□ -1.93
LHX6Q9UPM6 RNA5SP344-201ENST00000411081 104 ntBASIC2.98□□□□□ -1.93
LHX6Q9UPM6 AC004965.1-201ENST00000413033 213 ntBASIC2.98□□□□□ -1.93
LHX6Q9UPM6 AC244098.3-201ENST00000424803 96 ntBASIC2.98□□□□□ -1.93
LHX6Q9UPM6 MTND4LP1-201ENST00000446263 157 ntBASIC2.98□□□□□ -1.93
LHX6Q9UPM6 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX6Q9UPM6 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LHX6Q9UPM6 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.97□□□□□ -1.93
LHX6Q9UPM6 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LHX6Q9UPM6 MIR148B-201ENST00000362252 99 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 RNU6-940P-201ENST00000363433 104 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 SNORA25.5-201ENST00000363782 126 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 RNU1-51P-201ENST00000365345 176 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 MIR194-1-201ENST00000384892 85 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 RNU6-1054P-201ENST00000411293 104 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 AC097635.1-201ENST00000450678 155 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 MIR18B-201ENST00000454574 71 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 AP004217.1-201ENST00000480579 346 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 AC092185.1-201ENST00000491371 97 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 RN7SL274P-201ENST00000492268 272 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 RNU6-982P-201ENST00000516216 102 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 RNA5SP24-201ENST00000516478 95 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 MIR2276-201ENST00000516886 89 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 U1.36-201ENST00000620684 176 ntBASIC2.97□□□□□ -1.93
LHX6Q9UPM6 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC2.97□□□□□ -1.93
LHX6Q9UPM6 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.96□□□□□ -1.93
LHX6Q9UPM6 MIR377-201ENST00000362145 69 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 Y_RNA.164-201ENST00000363709 102 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 RNU6-668P-201ENST00000364180 107 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 RNU6-382P-201ENST00000365181 106 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 Y_RNA.375-201ENST00000365625 101 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 SNORA7.4-201ENST00000384249 137 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 U3.27-201ENST00000391237 200 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 RNA5SP100-201ENST00000410903 110 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 RNA5SP59-201ENST00000410922 110 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 RPS27P29-201ENST00000463110 252 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 5S_rRNA.3-201ENST00000517021 110 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 5S_rRNA.19-201ENST00000612131 110 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 5S_rRNA.18-201ENST00000621941 110 ntBASIC2.96□□□□□ -1.94
LHX6Q9UPM6 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
LHX6Q9UPM6 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.95□□□□□ -1.94
LHX6Q9UPM6 SNORD41-201ENST00000386967 70 ntBASIC2.95□□□□□ -1.94
LHX6Q9UPM6 AC092427.1-202ENST00000430569 476 ntBASIC2.95□□□□□ -1.94
LHX6Q9UPM6 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LHX6Q9UPM6 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.94□□□□□ -1.94
LHX6Q9UPM6 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
LHX6Q9UPM6 RNU6-1335P-201ENST00000365426 107 ntBASIC2.94□□□□□ -1.94
LHX6Q9UPM6 Y_RNA.697-201ENST00000516776 113 ntBASIC2.94□□□□□ -1.94
LHX6Q9UPM6 AC079600.2-201ENST00000550076 130 ntBASIC2.94□□□□□ -1.94
LHX6Q9UPM6 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.93□□□□□ -1.94
LHX6Q9UPM6 RNA5SP192-201ENST00000364404 120 ntBASIC2.93□□□□□ -1.94
LHX6Q9UPM6 SNORA31.17-201ENST00000516953 127 ntBASIC2.93□□□□□ -1.94
LHX6Q9UPM6 SNORD53-201ENST00000579969 78 ntBASIC2.93□□□□□ -1.94
LHX6Q9UPM6 MIR3920-201ENST00000581751 86 ntBASIC2.93□□□□□ -1.94
LHX6Q9UPM6 SNRPGP19-201ENST00000603826 189 ntBASIC2.93□□□□□ -1.94
LHX6Q9UPM6 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LHX6Q9UPM6 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX6Q9UPM6 IKZF2-213ENST00000457361 9350 ntTSL 5 BASIC2.93□□□□□ -1.94
LHX6Q9UPM6 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LHX6Q9UPM6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.92□□□□□ -1.94
LHX6Q9UPM6 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC2.92□□□□□ -1.94
LHX6Q9UPM6 RNU6-446P-201ENST00000362827 106 ntBASIC2.92□□□□□ -1.94
LHX6Q9UPM6 Y_RNA.258-201ENST00000364613 105 ntBASIC2.92□□□□□ -1.94
LHX6Q9UPM6 RNA5SP117-201ENST00000365294 118 ntBASIC2.92□□□□□ -1.94
LHX6Q9UPM6 AL591806.2-201ENST00000433122 173 ntBASIC2.92□□□□□ -1.94
LHX6Q9UPM6 AL513328.1-201ENST00000446460 224 ntBASIC2.92□□□□□ -1.94
LHX6Q9UPM6 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.92□□□□□ -1.94
LHX6Q9UPM6 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC2.92□□□□□ -1.94
LHX6Q9UPM6 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.92□□□□□ -1.94
LHX6Q9UPM6 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
LHX6Q9UPM6 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LHX6Q9UPM6 Y_RNA.118-201ENST00000363300 101 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 RNU6-936P-201ENST00000384005 107 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 RNA5SP229-201ENST00000410809 99 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX6Q9UPM6 UBBP3-201ENST00000445497 241 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 RNU6-1265P-201ENST00000516342 103 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 RNU6-1057P-201ENST00000517162 102 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 uc_338.1-201ENST00000612113 180 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 MIR6516-201ENST00000630554 81 ntBASIC2.91□□□□□ -1.94
LHX6Q9UPM6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.91□□□□□ -1.94
LHX6Q9UPM6 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.91□□□□□ -1.94
LHX6Q9UPM6 RNA5SP99-201ENST00000364020 114 ntBASIC2.9□□□□□ -1.95
LHX6Q9UPM6 Y_RNA.226-201ENST00000364337 114 ntBASIC2.9□□□□□ -1.95
LHX6Q9UPM6 RNU6-580P-201ENST00000365159 107 ntBASIC2.9□□□□□ -1.95
LHX6Q9UPM6 MIR764-201ENST00000390811 85 ntBASIC2.9□□□□□ -1.95
LHX6Q9UPM6 RNA5SP458-201ENST00000516188 119 ntBASIC2.9□□□□□ -1.95
LHX6Q9UPM6 MIR6082-201ENST00000613604 109 ntBASIC2.9□□□□□ -1.95
LHX6Q9UPM6 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
LHX6Q9UPM6 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
LHX6Q9UPM6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
LHX6Q9UPM6 RNU6-369P-201ENST00000362515 102 ntBASIC2.89□□□□□ -1.95
LHX6Q9UPM6 SNORD56.3-201ENST00000363507 71 ntBASIC2.89□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 272.4 ms