Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RPS26P5-201ENST00000418544 335 ntBASIC3.77□□□□□ -1.81
RNF39Q9H2S5 AC005326.1-201ENST00000429197 123 ntBASIC3.77□□□□□ -1.81
RNF39Q9H2S5 RN7SKP83-201ENST00000516512 178 ntBASIC3.77□□□□□ -1.81
RNF39Q9H2S5 RNA5SP309-201ENST00000516670 106 ntBASIC3.77□□□□□ -1.81
RNF39Q9H2S5 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.77□□□□□ -1.81
RNF39Q9H2S5 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 Y_RNA.109-201ENST00000363215 102 ntBASIC3.76□□□□□ -1.81
RNF39Q9H2S5 MIR513A1-201ENST00000385138 129 ntBASIC3.76□□□□□ -1.81
RNF39Q9H2S5 AC090617.8-201ENST00000623339 167 ntBASIC3.76□□□□□ -1.81
RNF39Q9H2S5 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.76□□□□□ -1.81
RNF39Q9H2S5 DMD-207ENST00000378677 13932 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
RNF39Q9H2S5 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF39Q9H2S5 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF39Q9H2S5 MIR429-201ENST00000362106 83 ntBASIC3.75□□□□□ -1.81
RNF39Q9H2S5 RNU6-485P-201ENST00000363475 107 ntBASIC3.75□□□□□ -1.81
RNF39Q9H2S5 MIR548H4-201ENST00000408689 111 ntBASIC3.75□□□□□ -1.81
RNF39Q9H2S5 RNU1-123P-201ENST00000458950 160 ntBASIC3.75□□□□□ -1.81
RNF39Q9H2S5 RN7SL601P-201ENST00000471221 293 ntBASIC3.75□□□□□ -1.81
RNF39Q9H2S5 GHRLOS.1-201ENST00000610995 70 ntBASIC3.75□□□□□ -1.81
RNF39Q9H2S5 MIR3651-201ENST00000630427 90 ntBASIC3.75□□□□□ -1.81
RNF39Q9H2S5 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
RNF39Q9H2S5 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC3.75□□□□□ -1.81
RNF39Q9H2S5 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
RNF39Q9H2S5 NCAM2-201ENST00000284894 4699 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
RNF39Q9H2S5 PREPL-207ENST00000409957 4703 ntTSL 5 BASIC3.74□□□□□ -1.81
RNF39Q9H2S5 RNU6-945P-201ENST00000383947 107 ntBASIC3.74□□□□□ -1.81
RNF39Q9H2S5 MIR517C-201ENST00000385103 95 ntBASIC3.74□□□□□ -1.81
RNF39Q9H2S5 MIR486-1-201ENST00000612171 68 ntBASIC3.74□□□□□ -1.81
RNF39Q9H2S5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.74□□□□□ -1.81
RNF39Q9H2S5 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
RNF39Q9H2S5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.74□□□□□ -1.81
RNF39Q9H2S5 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF39Q9H2S5 MIR708-201ENST00000390708 88 ntBASIC3.73□□□□□ -1.81
RNF39Q9H2S5 AC026333.2-201ENST00000542164 106 ntBASIC3.73□□□□□ -1.81
RNF39Q9H2S5 HOXA11-AS1_6.1-201ENST00000620092 179 ntBASIC3.73□□□□□ -1.81
RNF39Q9H2S5 MIR4727-201ENST00000622232 55 ntBASIC3.73□□□□□ -1.81
RNF39Q9H2S5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
RNF39Q9H2S5 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF39Q9H2S5 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
RNF39Q9H2S5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF39Q9H2S5 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF39Q9H2S5 Y_RNA.206-201ENST00000364136 102 ntBASIC3.72□□□□□ -1.81
RNF39Q9H2S5 RNU6-828P-201ENST00000364876 107 ntBASIC3.72□□□□□ -1.81
RNF39Q9H2S5 RNA5SP126-201ENST00000365092 109 ntBASIC3.72□□□□□ -1.81
RNF39Q9H2S5 AC115115.1-201ENST00000449927 248 ntBASIC3.72□□□□□ -1.81
RNF39Q9H2S5 MIR7112-201ENST00000616126 65 ntBASIC3.72□□□□□ -1.81
RNF39Q9H2S5 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF39Q9H2S5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.72□□□□□ -1.81
RNF39Q9H2S5 AC093908.1-201ENST00000623125 8092 ntBASIC3.72□□□□□ -1.81
RNF39Q9H2S5 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
RNF39Q9H2S5 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF39Q9H2S5 OXR1-209ENST00000517566 4501 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF39Q9H2S5 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
RNF39Q9H2S5 AC062016.1-201ENST00000355719 319 ntBASIC3.71□□□□□ -1.82
RNF39Q9H2S5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.71□□□□□ -1.82
RNF39Q9H2S5 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF39Q9H2S5 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
RNF39Q9H2S5 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.7□□□□□ -1.82
RNF39Q9H2S5 MIR518A2-201ENST00000384966 87 ntBASIC3.7□□□□□ -1.82
RNF39Q9H2S5 SNORA31.2-201ENST00000516019 134 ntBASIC3.7□□□□□ -1.82
RNF39Q9H2S5 SNORA31.14-201ENST00000516728 116 ntBASIC3.7□□□□□ -1.82
RNF39Q9H2S5 RNU7-151P-201ENST00000516930 53 ntBASIC3.7□□□□□ -1.82
RNF39Q9H2S5 AL360157.1-201ENST00000565962 87 ntBASIC3.7□□□□□ -1.82
RNF39Q9H2S5 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
RNF39Q9H2S5 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF39Q9H2S5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
RNF39Q9H2S5 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF39Q9H2S5 SNORD21-201ENST00000383953 95 ntBASIC3.69□□□□□ -1.82
RNF39Q9H2S5 RNU1-89P-201ENST00000384592 164 ntBASIC3.69□□□□□ -1.82
RNF39Q9H2S5 AC006989.1-201ENST00000427212 131 ntBASIC3.69□□□□□ -1.82
RNF39Q9H2S5 SNORA31.17-201ENST00000516953 127 ntBASIC3.69□□□□□ -1.82
RNF39Q9H2S5 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
RNF39Q9H2S5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF39Q9H2S5 PPP1R9A-208ENST00000456331 10090 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
RNF39Q9H2S5 Y_RNA.32-201ENST00000362589 110 ntBASIC3.68□□□□□ -1.82
RNF39Q9H2S5 SNORD45.2-201ENST00000363552 72 ntBASIC3.68□□□□□ -1.82
RNF39Q9H2S5 DEFA7P-201ENST00000382676 285 ntBASIC3.68□□□□□ -1.82
RNF39Q9H2S5 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
RNF39Q9H2S5 RN7SKP123-201ENST00000410732 291 ntBASIC3.68□□□□□ -1.82
RNF39Q9H2S5 AC027335.2-201ENST00000624030 375 ntBASIC3.68□□□□□ -1.82
RNF39Q9H2S5 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF39Q9H2S5 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC3.68□□□□□ -1.82
RNF39Q9H2S5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.68□□□□□ -1.82
RNF39Q9H2S5 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.67□□□□□ -1.82
RNF39Q9H2S5 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
RNF39Q9H2S5 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF39Q9H2S5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
RNF39Q9H2S5 MIR519A2-201ENST00000384990 87 ntBASIC3.67□□□□□ -1.82
RNF39Q9H2S5 RNU7-102P-201ENST00000458948 62 ntBASIC3.67□□□□□ -1.82
RNF39Q9H2S5 RNU5B-6P-201ENST00000516765 68 ntBASIC3.67□□□□□ -1.82
RNF39Q9H2S5 MIR4676-201ENST00000583078 72 ntBASIC3.67□□□□□ -1.82
RNF39Q9H2S5 MIR4276-201ENST00000584832 70 ntBASIC3.67□□□□□ -1.82
RNF39Q9H2S5 U6.96-201ENST00000636425 70 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms