Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 MIR617-201ENST00000385030 97 ntBASIC3.04□□□□□ -1.92
MS4A3Q96HJ5 RNA5SP171-201ENST00000391071 115 ntBASIC3.04□□□□□ -1.92
MS4A3Q96HJ5 SNORD83.1-201ENST00000411362 77 ntBASIC3.04□□□□□ -1.92
MS4A3Q96HJ5 RN7SL20P-201ENST00000488827 297 ntBASIC3.04□□□□□ -1.92
MS4A3Q96HJ5 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC3.04□□□□□ -1.92
MS4A3Q96HJ5 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.04□□□□□ -1.92
MS4A3Q96HJ5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC3.04□□□□□ -1.92
MS4A3Q96HJ5 RNU4-35P-201ENST00000362588 141 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 SNORD56.3-201ENST00000363507 71 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 Y_RNA.250-201ENST00000364542 110 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 RNA5SP126-201ENST00000365092 109 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 MIR490-201ENST00000384865 128 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 SNORA48.8-201ENST00000391324 134 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 SNORD42B-201ENST00000458893 67 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 RNU2-27P-201ENST00000516185 142 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 AC026333.2-201ENST00000542164 106 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 MIR7851-201ENST00000610611 160 ntBASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
MS4A3Q96HJ5 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 AC093010.3-201ENST00000570269 15214 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 Y_RNA.333-201ENST00000365274 102 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 RNU6-1162P-201ENST00000384443 104 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 MIR517B-201ENST00000385102 67 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 HMGN1P18-201ENST00000457642 277 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 RN7SL293P-201ENST00000481765 281 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 SNORA64.4-201ENST00000516632 81 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 SNORA31.26-201ENST00000517250 137 ntBASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
MS4A3Q96HJ5 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
MS4A3Q96HJ5 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.01□□□□□ -1.93
MS4A3Q96HJ5 RNA5SP119-201ENST00000362715 117 ntBASIC3.01□□□□□ -1.93
MS4A3Q96HJ5 SNORD17-201ENST00000390930 237 ntBASIC3.01□□□□□ -1.93
MS4A3Q96HJ5 JTBP1-201ENST00000441314 247 ntBASIC3.01□□□□□ -1.93
MS4A3Q96HJ5 AC067940.1-201ENST00000458411 300 ntBASIC3.01□□□□□ -1.93
MS4A3Q96HJ5 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.01□□□□□ -1.93
MS4A3Q96HJ5 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MS4A3Q96HJ5 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
MS4A3Q96HJ5 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3□□□□□ -1.93
MS4A3Q96HJ5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
MS4A3Q96HJ5 U8.2-201ENST00000363156 134 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 RNU6-934P-201ENST00000365154 107 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 SNORA9-201ENST00000384215 133 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 AC018659.1-201ENST00000551083 169 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3□□□□□ -1.93
MS4A3Q96HJ5 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3□□□□□ -1.93
MS4A3Q96HJ5 AC008739.3-201ENST00000603262 127 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 AC012314.7-201ENST00000619693 93 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 MIR6075-201ENST00000620782 95 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3□□□□□ -1.93
MS4A3Q96HJ5 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
MS4A3Q96HJ5 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 RNU7-174P-201ENST00000516248 59 ntBASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 U6.105-201ENST00000637379 88 ntBASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 AL035425.3-201ENST00000564206 4996 ntBASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
MS4A3Q96HJ5 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 RNA5SP403-201ENST00000363598 108 ntBASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 RNU6-990P-201ENST00000364385 104 ntBASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 RN7SKP123-201ENST00000410732 291 ntBASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 IGKV2-26-201ENST00000518305 343 ntBASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 AC019176.2-201ENST00000611579 315 ntBASIC2.98□□□□□ -1.93
MS4A3Q96HJ5 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 RNU6V-201ENST00000384105 107 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 MIR521-2-201ENST00000384818 87 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 MIR7-3-201ENST00000384898 110 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 AC021146.9-201ENST00000512503 156 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 RNU1-143P-201ENST00000516296 146 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 MIR4771-2-201ENST00000577758 74 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 MIR4771-1-201ENST00000582617 74 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 U1.23-201ENST00000610293 146 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 RNU1-68P-201ENST00000615382 146 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 U4.4-201ENST00000620626 117 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 U1.39-201ENST00000621562 146 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 AL359851.1-201ENST00000569460 4997 ntBASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.97□□□□□ -1.93
MS4A3Q96HJ5 TTN-204ENST00000360870 18218 ntTSL 5 BASIC2.96□□□□□ -1.93
MS4A3Q96HJ5 RNA5SP450-201ENST00000411206 102 ntBASIC2.96□□□□□ -1.94
MS4A3Q96HJ5 PRSS3P4-201ENST00000453323 162 ntBASIC2.96□□□□□ -1.94
MS4A3Q96HJ5 RNA5SP385-201ENST00000515947 110 ntBASIC2.96□□□□□ -1.94
MS4A3Q96HJ5 RNU6-231P-201ENST00000517122 103 ntBASIC2.96□□□□□ -1.94
MS4A3Q96HJ5 SCARNA20.6-201ENST00000517251 106 ntBASIC2.96□□□□□ -1.94
MS4A3Q96HJ5 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC2.96□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms