Protein–RNA interactions for Protein: P49754

VPS41, Vacuolar protein sorting-associated protein 41 homolog, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41P49754 Y_RNA.327-201ENST00000365201 102 ntBASIC1.06□□□□□ -2.24
VPS41P49754 Y_RNA.338-201ENST00000365320 114 ntBASIC1.06□□□□□ -2.24
VPS41P49754 RNU6-476P-201ENST00000384726 107 ntBASIC1.06□□□□□ -2.24
VPS41P49754 MIR548A1-201ENST00000385041 97 ntBASIC1.06□□□□□ -2.24
VPS41P49754 RNU6-1064P-201ENST00000410626 104 ntBASIC1.06□□□□□ -2.24
VPS41P49754 AC015818.7-201ENST00000428754 109 ntBASIC1.06□□□□□ -2.24
VPS41P49754 AC087499.7-201ENST00000441958 109 ntBASIC1.06□□□□□ -2.24
VPS41P49754 RNU7-185P-201ENST00000459215 60 ntBASIC1.06□□□□□ -2.24
VPS41P49754 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC1.06□□□□□ -2.24
VPS41P49754 AL035470.1-201ENST00000622571 220 ntBASIC1.06□□□□□ -2.24
VPS41P49754 MIR1255B1-201ENST00000636325 63 ntBASIC1.06□□□□□ -2.24
VPS41P49754 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC1.06□□□□□ -2.24
VPS41P49754 HIF1A-204ENST00000539097 3956 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS41P49754 Y_RNA.549-201ENST00000384657 102 ntBASIC1.05□□□□□ -2.24
VPS41P49754 MIR206-201ENST00000384872 86 ntBASIC1.05□□□□□ -2.24
VPS41P49754 MIR200A-201ENST00000384875 90 ntBASIC1.05□□□□□ -2.24
VPS41P49754 RNU6-1307P-201ENST00000391012 103 ntBASIC1.05□□□□□ -2.24
VPS41P49754 MIR1827-201ENST00000408549 66 ntBASIC1.05□□□□□ -2.24
VPS41P49754 UBL5P1-201ENST00000507979 193 ntBASIC1.05□□□□□ -2.24
VPS41P49754 MIR4498-201ENST00000577599 66 ntBASIC1.05□□□□□ -2.24
VPS41P49754 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC1.05□□□□□ -2.24
VPS41P49754 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC1.05□□□□□ -2.24
VPS41P49754 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
VPS41P49754 AC023934.1-201ENST00000574529 2389 ntBASIC1.04□□□□□ -2.24
VPS41P49754 RNU6-1290P-201ENST00000362957 109 ntBASIC1.04□□□□□ -2.24
VPS41P49754 RNU1-36P-201ENST00000365130 165 ntBASIC1.04□□□□□ -2.24
VPS41P49754 RNU6-429P-201ENST00000384582 108 ntBASIC1.04□□□□□ -2.24
VPS41P49754 Y_RNA.588-201ENST00000391254 102 ntBASIC1.04□□□□□ -2.24
VPS41P49754 RNU6-994P-201ENST00000410507 111 ntBASIC1.04□□□□□ -2.24
VPS41P49754 Y_RNA.629-201ENST00000411368 105 ntBASIC1.04□□□□□ -2.24
VPS41P49754 MTND5P34-201ENST00000568888 325 ntBASIC1.04□□□□□ -2.24
VPS41P49754 MIR4771-2-201ENST00000577758 74 ntBASIC1.04□□□□□ -2.24
VPS41P49754 MIR548AI-201ENST00000579940 88 ntBASIC1.04□□□□□ -2.24
VPS41P49754 MIR4771-1-201ENST00000582617 74 ntBASIC1.04□□□□□ -2.24
VPS41P49754 MIR4295-201ENST00000585286 85 ntBASIC1.04□□□□□ -2.24
VPS41P49754 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
VPS41P49754 RNA5SP432-201ENST00000362480 116 ntBASIC1.03□□□□□ -2.24
VPS41P49754 Y_RNA.35-201ENST00000362601 101 ntBASIC1.03□□□□□ -2.24
VPS41P49754 RNU6-1056P-201ENST00000383996 107 ntBASIC1.03□□□□□ -2.24
VPS41P49754 SNORD116-21-201ENST00000384507 92 ntBASIC1.03□□□□□ -2.24
VPS41P49754 RNU6-880P-201ENST00000384526 107 ntBASIC1.03□□□□□ -2.24
VPS41P49754 TRAJ1-201ENST00000390536 62 ntAPPRIS P1 BASIC1.03□□□□□ -2.24
VPS41P49754 RNU6-1321P-201ENST00000390905 107 ntBASIC1.03□□□□□ -2.24
VPS41P49754 AC087343.1-201ENST00000477341 475 ntBASIC1.03□□□□□ -2.24
VPS41P49754 AC103879.1-201ENST00000503093 255 ntTSL 2 BASIC1.03□□□□□ -2.24
VPS41P49754 RNU7-2P-201ENST00000516096 62 ntBASIC1.03□□□□□ -2.24
VPS41P49754 MIR4676-201ENST00000583078 72 ntBASIC1.03□□□□□ -2.24
VPS41P49754 AL359821.1-201ENST00000605519 182 ntBASIC1.03□□□□□ -2.24
VPS41P49754 RNY1P10-201ENST00000363268 113 ntBASIC1.02□□□□□ -2.25
VPS41P49754 RNU6-1187P-201ENST00000364771 110 ntBASIC1.02□□□□□ -2.25
VPS41P49754 Y_RNA.281-201ENST00000364774 94 ntBASIC1.02□□□□□ -2.25
VPS41P49754 SNORD115-35-201ENST00000365122 82 ntBASIC1.02□□□□□ -2.25
VPS41P49754 MIR125B2-201ENST00000385128 89 ntBASIC1.02□□□□□ -2.25
VPS41P49754 RPL39P34-201ENST00000477141 156 ntBASIC1.02□□□□□ -2.25
VPS41P49754 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.02□□□□□ -2.25
VPS41P49754 TRMT112P2-201ENST00000512910 132 ntBASIC1.02□□□□□ -2.25
VPS41P49754 RNU6-1053P-201ENST00000515930 101 ntBASIC1.02□□□□□ -2.25
VPS41P49754 MIR6129-201ENST00000616087 109 ntBASIC1.02□□□□□ -2.25
VPS41P49754 AC105081.1-201ENST00000617727 106 ntBASIC1.02□□□□□ -2.25
VPS41P49754 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC1.01□□□□□ -2.25
VPS41P49754 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.01□□□□□ -2.25
VPS41P49754 RNU6-363P-201ENST00000362895 105 ntBASIC1.01□□□□□ -2.25
VPS41P49754 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
VPS41P49754 SNORD114-24-201ENST00000365029 72 ntBASIC1.01□□□□□ -2.25
VPS41P49754 MIR1257-201ENST00000408490 117 ntBASIC1.01□□□□□ -2.25
VPS41P49754 RNU6ATAC33P-201ENST00000408647 126 ntBASIC1.01□□□□□ -2.25
VPS41P49754 SNORD93-201ENST00000408813 74 ntBASIC1.01□□□□□ -2.25
VPS41P49754 FABP5P4-201ENST00000437203 171 ntBASIC1.01□□□□□ -2.25
VPS41P49754 AL603825.1-201ENST00000438481 80 ntBASIC1.01□□□□□ -2.25
VPS41P49754 AL353813.1-201ENST00000440700 253 ntBASIC1.01□□□□□ -2.25
VPS41P49754 RNU6-1110P-201ENST00000516462 101 ntBASIC1.01□□□□□ -2.25
VPS41P49754 RNU6-589P-201ENST00000516485 107 ntBASIC1.01□□□□□ -2.25
VPS41P49754 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.01□□□□□ -2.25
VPS41P49754 MIR4491-201ENST00000581087 68 ntBASIC1.01□□□□□ -2.25
VPS41P49754 MIR4804-201ENST00000581683 73 ntBASIC1.01□□□□□ -2.25
VPS41P49754 AL162726.3-218ENST00000636401 95 ntBASIC1.01□□□□□ -2.25
VPS41P49754 MIR1-1-201ENST00000362147 71 ntBASIC1□□□□□ -2.25
VPS41P49754 Y_RNA.85-201ENST00000363014 111 ntBASIC1□□□□□ -2.25
VPS41P49754 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC1□□□□□ -2.25
VPS41P49754 AC067940.1-201ENST00000458411 300 ntBASIC1□□□□□ -2.25
VPS41P49754 U7.7-201ENST00000459276 60 ntBASIC1□□□□□ -2.25
VPS41P49754 RPL39P28-201ENST00000465655 155 ntBASIC1□□□□□ -2.25
VPS41P49754 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1□□□□□ -2.25
VPS41P49754 RNU6-521P-201ENST00000516663 105 ntBASIC1□□□□□ -2.25
VPS41P49754 AC138749.4-201ENST00000563970 127 ntBASIC1□□□□□ -2.25
VPS41P49754 SNORA63.5-201ENST00000363548 123 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU4-67P-201ENST00000364569 141 ntBASIC0.99□□□□□ -2.25
VPS41P49754 Y_RNA.448-201ENST00000384185 108 ntBASIC0.99□□□□□ -2.25
VPS41P49754 MIR942-201ENST00000401111 86 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-447P-201ENST00000410293 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-1118P-201ENST00000410382 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-1076P-201ENST00000410397 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-355P-201ENST00000410427 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-791P-201ENST00000410467 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-705P-201ENST00000410601 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-1100P-201ENST00000410691 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-860P-201ENST00000410860 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-1217P-201ENST00000411276 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 RNU6-785P-201ENST00000411324 104 ntBASIC0.99□□□□□ -2.25
VPS41P49754 AC012668.1-201ENST00000457625 228 ntTSL 3 BASIC0.99□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms