Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 RNU6-832P-201ENST00000363319 107 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 RNY1P7-201ENST00000384743 110 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 RNU1-78P-201ENST00000391248 165 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 AP003716.2-201ENST00000528260 108 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 DEFB131E-201ENST00000532329 154 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 AL512310.8-201ENST00000550183 120 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 AL357312.1-201ENST00000603879 298 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
HLA-DOAP06340 AC012531.4-201ENST00000616509 177 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 MIR6740-201ENST00000618268 113 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 MIR6516-201ENST00000630554 81 ntBASIC1.54□□□□□ -2.16
HLA-DOAP06340 RNA5SP48-201ENST00000363969 126 ntBASIC1.53□□□□□ -2.16
HLA-DOAP06340 RNY1P13-201ENST00000365030 105 ntBASIC1.53□□□□□ -2.16
HLA-DOAP06340 SNORD115-35-201ENST00000365122 82 ntBASIC1.53□□□□□ -2.16
HLA-DOAP06340 MIR588-201ENST00000384900 83 ntBASIC1.53□□□□□ -2.16
HLA-DOAP06340 MIR499A-201ENST00000384903 122 ntBASIC1.53□□□□□ -2.16
HLA-DOAP06340 Y_RNA.78-201ENST00000362970 110 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 Y_RNA.448-201ENST00000384185 108 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNU6-1201P-201ENST00000384227 107 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNU6-1113P-201ENST00000384348 107 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNU6-1065P-201ENST00000384513 106 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNU6-1321P-201ENST00000390905 107 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNU7-2P-201ENST00000516096 62 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNA5SP61-201ENST00000516453 100 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNU7-137P-201ENST00000516788 62 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 AC141846.1-201ENST00000568348 142 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 MIR4694-201ENST00000578534 80 ntBASIC1.52□□□□□ -2.17
HLA-DOAP06340 RNU6-53P-201ENST00000365367 106 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 Y_RNA.354-201ENST00000365448 111 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 MIR34C-201ENST00000384831 77 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 MIR758-201ENST00000390227 88 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
HLA-DOAP06340 MRPL35P3-201ENST00000421557 364 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 MTATP8P2-201ENST00000435212 202 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 SNORA40.13-201ENST00000516379 120 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.51□□□□□ -2.17
HLA-DOAP06340 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 AL512310.12-203ENST00000640543 90 ntBASIC1.51□□□□□ -2.17
HLA-DOAP06340 SNORD33-201ENST00000362761 85 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 Y_RNA.544-201ENST00000384650 113 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 RNU6-644P-201ENST00000391155 98 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 RPL39P39-201ENST00000455840 151 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 snoU13.2-201ENST00000459201 104 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 SCARNA23-201ENST00000516060 130 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 Y_RNA.694-201ENST00000516677 117 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 MIR4422-201ENST00000581938 83 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 AL662814.1-201ENST00000617364 121 ntBASIC1.5□□□□□ -2.17
HLA-DOAP06340 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.5□□□□□ -2.17
HLA-DOAP06340 MIR103A2-201ENST00000362154 78 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 RNA5SP264-201ENST00000363115 107 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 RNU4-36P-201ENST00000364294 144 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 Y_RNA.467-201ENST00000384297 102 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 RNA5SP237-201ENST00000410414 113 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 AC245517.4-201ENST00000448601 281 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 snoU13.21-201ENST00000459368 105 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 AC048334.1-201ENST00000477975 159 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 AL133373.1-201ENST00000497098 94 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 RN7SKP88-201ENST00000516847 250 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 RNU6-1006P-201ENST00000516998 103 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 MIR4777-201ENST00000583710 86 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 7SK.8-201ENST00000612110 250 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 MIR376B-201ENST00000614515 100 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 7SK.11-201ENST00000615477 250 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 Y_RNA.818-201ENST00000618813 71 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 7SK.13-201ENST00000622040 250 ntBASIC1.49□□□□□ -2.17
HLA-DOAP06340 AC068733.3-201ENST00000632757 269 ntTSL 3 BASIC1.49□□□□□ -2.17
HLA-DOAP06340 RNU6-1313P-201ENST00000362622 102 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 RNU6-170P-201ENST00000362832 104 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 RNU6-396P-201ENST00000365369 105 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 Y_RNA.363-201ENST00000365529 113 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 MIR934-201ENST00000401241 83 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 MIR1276-201ENST00000408707 83 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.48□□□□□ -2.17
HLA-DOAP06340 RNU7-61P-201ENST00000515897 61 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 RNU6-162P-201ENST00000516228 103 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 AL442128.1-201ENST00000615151 90 ntBASIC1.48□□□□□ -2.17
HLA-DOAP06340 Y_RNA.107-201ENST00000363190 121 ntBASIC1.47□□□□□ -2.17
HLA-DOAP06340 Y_RNA.342-201ENST00000365352 113 ntBASIC1.47□□□□□ -2.17
HLA-DOAP06340 Y_RNA.601-201ENST00000410500 113 ntBASIC1.47□□□□□ -2.17
HLA-DOAP06340 RPL30P7-201ENST00000479312 323 ntBASIC1.47□□□□□ -2.17
HLA-DOAP06340 Y_RNA.659-201ENST00000515994 113 ntBASIC1.47□□□□□ -2.17
HLA-DOAP06340 RNU6-902P-201ENST00000517212 91 ntBASIC1.47□□□□□ -2.17
HLA-DOAP06340 SEPT14P17-201ENST00000617978 177 ntBASIC1.47□□□□□ -2.17
HLA-DOAP06340 MIR30D-201ENST00000362283 70 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 Y_RNA.466-201ENST00000384294 113 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 MIR563-201ENST00000385080 79 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 AC096949.1-201ENST00000412047 152 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 AC015818.7-201ENST00000428754 109 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 AC087499.7-201ENST00000441958 109 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 AC109327.2-201ENST00000448339 378 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 RNU6-970P-201ENST00000516312 107 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 RNA5SP102-201ENST00000516865 106 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 MIR4285-201ENST00000581001 85 ntBASIC1.46□□□□□ -2.18
HLA-DOAP06340 SNORD114-10-201ENST00000363409 72 ntBASIC1.45□□□□□ -2.18
HLA-DOAP06340 Y_RNA.369-201ENST00000365568 117 ntBASIC1.45□□□□□ -2.18
HLA-DOAP06340 U8.15-201ENST00000390947 134 ntBASIC1.45□□□□□ -2.18
HLA-DOAP06340 RNU6-1165P-201ENST00000410119 107 ntBASIC1.45□□□□□ -2.18
HLA-DOAP06340 RNU7-62P-201ENST00000458856 62 ntBASIC1.45□□□□□ -2.18
HLA-DOAP06340 RNU6-1018P-201ENST00000516577 106 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 174.8 ms