Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 MIR5582-201ENST00000579697 68 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 MIR3660-201ENST00000584845 100 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 AC105081.1-201ENST00000617727 106 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 MIR6740-201ENST00000618268 113 ntBASIC1.49□□□□□ -2.17
CDKL5O76039 MIR103A2-201ENST00000362154 78 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU6-1313P-201ENST00000362622 102 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 SNORD33-201ENST00000362761 85 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNA5SP264-201ENST00000363115 107 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU6-654P-201ENST00000364373 107 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU6-1065P-201ENST00000384513 106 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU6-205P-201ENST00000390858 107 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU6-1321P-201ENST00000390905 107 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNA5SP237-201ENST00000410414 113 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU7-95P-201ENST00000459222 64 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RPL30P7-201ENST00000479312 323 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 UBL5P1-201ENST00000507979 193 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU6-1053P-201ENST00000515930 101 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 SCARNA23-201ENST00000516060 130 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 RNU6-1018P-201ENST00000516577 106 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 MIR6516-201ENST00000630554 81 ntBASIC1.48□□□□□ -2.17
CDKL5O76039 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.47□□□□□ -2.17
CDKL5O76039 Y_RNA.448-201ENST00000384185 108 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 MIR588-201ENST00000384900 83 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 RNA5SP95-201ENST00000410319 137 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 Y_RNA.601-201ENST00000410500 113 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 RNU6-795P-201ENST00000516323 103 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 MIR2115-201ENST00000516657 100 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 uc_338.6-201ENST00000613544 171 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 AL512310.12-203ENST00000640543 90 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 AC091304.10-201ENST00000641554 121 ntBASIC1.47□□□□□ -2.17
CDKL5O76039 Y_RNA.107-201ENST00000363190 121 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 SNORD114-10-201ENST00000363409 72 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 Y_RNA.247-201ENST00000364500 92 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 Y_RNA.377-201ENST00000365644 108 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 MIR488-201ENST00000365739 83 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 MIR563-201ENST00000385080 79 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.46□□□□□ -2.18
CDKL5O76039 MTATP8P2-201ENST00000435212 202 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 RNU6-158P-201ENST00000517104 100 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 MIR4264-201ENST00000583520 66 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 MIR548Z-201ENST00000584743 97 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 AL442128.1-201ENST00000615151 90 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 AC012531.4-201ENST00000616509 177 ntBASIC1.46□□□□□ -2.18
CDKL5O76039 MIR26B-201ENST00000362251 77 ntBASIC1.45□□□□□ -2.18
CDKL5O76039 SNORA7.1-201ENST00000363750 139 ntBASIC1.45□□□□□ -2.18
CDKL5O76039 RNU6-1131P-201ENST00000364955 107 ntBASIC1.45□□□□□ -2.18
CDKL5O76039 Y_RNA.466-201ENST00000384294 113 ntBASIC1.45□□□□□ -2.18
CDKL5O76039 MIR34C-201ENST00000384831 77 ntBASIC1.45□□□□□ -2.18
CDKL5O76039 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
CDKL5O76039 RNU6-1006P-201ENST00000516998 103 ntBASIC1.45□□□□□ -2.18
CDKL5O76039 AP000753.3-201ENST00000604083 169 ntBASIC1.45□□□□□ -2.18
CDKL5O76039 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.45□□□□□ -2.18
CDKL5O76039 Y_RNA.10-201ENST00000362371 110 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 RNU6-170P-201ENST00000362832 104 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 Y_RNA.93-201ENST00000363066 109 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 Y_RNA.164-201ENST00000363709 102 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 RNU6-949P-201ENST00000384040 107 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 RNU6-49P-201ENST00000384256 107 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 MT-TN-201ENST00000387400 73 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 RNU1-78P-201ENST00000391248 165 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 RNU7-62P-201ENST00000458856 62 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 Y_RNA.676-201ENST00000516393 96 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 MIR4422-201ENST00000581938 83 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 MIR376B-201ENST00000614515 100 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 MIR4679-1-201ENST00000637619 75 ntBASIC1.44□□□□□ -2.18
CDKL5O76039 MIR30D-201ENST00000362283 70 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 Y_RNA.4-201ENST00000362333 112 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 SNORD26-201ENST00000384147 75 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 RNU6-1165P-201ENST00000410119 107 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 RNU6-613P-201ENST00000410412 108 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 AC245517.4-201ENST00000448601 281 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 AC048334.1-201ENST00000477975 159 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 Y_RNA.659-201ENST00000515994 113 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 RNU11-2P-201ENST00000516898 142 ntBASIC1.43□□□□□ -2.18
CDKL5O76039 KTN1-205ENST00000395314 4618 ntAPPRIS P4 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDKL5O76039 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
CDKL5O76039 MIR377-201ENST00000362145 69 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 RNU6-865P-201ENST00000364772 107 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 Y_RNA.369-201ENST00000365568 117 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 RNU6-939P-201ENST00000384634 107 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 RNU6ATAC3P-201ENST00000387974 126 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 AC004941.2-201ENST00000427009 228 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 RNU7-48P-201ENST00000458875 63 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 RNU7-61P-201ENST00000515897 61 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 RN7SKP88-201ENST00000516847 250 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 AC024382.1-201ENST00000520224 292 ntTSL 3 BASIC1.42□□□□□ -2.18
CDKL5O76039 MIR4777-201ENST00000583710 86 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 7SK.8-201ENST00000612110 250 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 7SK.11-201ENST00000615477 250 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 7SK.13-201ENST00000622040 250 ntBASIC1.42□□□□□ -2.18
CDKL5O76039 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.42□□□□□ -2.18
CDKL5O76039 SNORD45B-201ENST00000364617 72 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 Y_RNA.342-201ENST00000365352 113 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 RNY1P7-201ENST00000384743 110 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 RNU6-644P-201ENST00000391155 98 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 RNU6ATAC41P-201ENST00000408600 126 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 RNU6-1054P-201ENST00000411293 104 ntBASIC1.41□□□□□ -2.18
CDKL5O76039 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.41□□□□□ -2.18
Retrieved 100 of 98,524 protein–RNA pairs in 108.7 ms