Protein–RNA interactions for Protein: O60609

GFRA3, GDNF family receptor alpha-3, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3O60609 AL138827.1-201ENST00000402666 306 ntBASIC2.81□□□□□ -1.96
GFRA3O60609 RN7SKP223-201ENST00000410582 62 ntBASIC2.81□□□□□ -1.96
GFRA3O60609 RNU6-1054P-201ENST00000411293 104 ntBASIC2.81□□□□□ -1.96
GFRA3O60609 RNU4ATAC3P-201ENST00000516699 126 ntBASIC2.81□□□□□ -1.96
GFRA3O60609 MIR7153-201ENST00000637758 57 ntBASIC2.81□□□□□ -1.96
GFRA3O60609 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA3O60609 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.81□□□□□ -1.96
GFRA3O60609 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC2.81□□□□□ -1.96
GFRA3O60609 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC2.8□□□□□ -1.96
GFRA3O60609 SNORD75.2-201ENST00000408784 58 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 RNU6-1165P-201ENST00000410119 107 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 RNU7-24P-201ENST00000458867 62 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 RNU6-1089P-201ENST00000516473 104 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 MIR2276-201ENST00000516886 89 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 MIR4781-201ENST00000585250 76 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 AC103810.8-201ENST00000607347 118 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC2.8□□□□□ -1.96
GFRA3O60609 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.8□□□□□ -1.96
GFRA3O60609 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC2.8□□□□□ -1.96
GFRA3O60609 AC073325.2-201ENST00000339545 159 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 RNA5SP289-201ENST00000362332 137 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 MIR203A-201ENST00000384836 110 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 MIR27B-201ENST00000385129 97 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 RNU6-724P-201ENST00000390958 105 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 HMGN2P23-201ENST00000456759 269 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 MIR548H5-201ENST00000580314 60 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 uc_338.6-201ENST00000613544 171 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 MIR6509-201ENST00000614603 85 ntBASIC2.79□□□□□ -1.96
GFRA3O60609 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC2.79□□□□□ -1.96
GFRA3O60609 RNU6-495P-201ENST00000362995 107 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 SNORA25.3-201ENST00000363205 127 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 RNU1-112P-201ENST00000364401 164 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 SNORA68.1-201ENST00000364537 132 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 RNU1-91P-201ENST00000364746 163 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 RNU6-656P-201ENST00000516785 107 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 AC015688.6-201ENST00000577737 104 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.78□□□□□ -1.96
GFRA3O60609 U6.98-201ENST00000637157 84 ntBASIC2.78□□□□□ -1.96
GFRA3O60609 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
GFRA3O60609 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC2.78□□□□□ -1.97
GFRA3O60609 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.97
GFRA3O60609 RNU6-53P-201ENST00000365367 106 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 MIR489-201ENST00000384923 84 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 MIR1302-7-201ENST00000408841 72 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 RNA5SP21-201ENST00000410917 96 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 RN7SL442P-201ENST00000473804 320 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.77□□□□□ -1.97
GFRA3O60609 AC013244.2-201ENST00000603396 103 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 AP000942.3-201ENST00000603702 160 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 RNU7-10P-201ENST00000607194 63 ntBASIC2.77□□□□□ -1.97
GFRA3O60609 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.77□□□□□ -1.97
GFRA3O60609 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC2.77□□□□□ -1.97
GFRA3O60609 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
GFRA3O60609 MIR424-201ENST00000362227 98 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 SNORD114-1-201ENST00000362705 72 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 SNORD114-30-201ENST00000364448 72 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 RNU6-302P-201ENST00000365249 107 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 HMGN1P18-201ENST00000457642 277 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 RNU6-1265P-201ENST00000516342 103 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 MIR548V-201ENST00000584165 80 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.76□□□□□ -1.97
GFRA3O60609 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
GFRA3O60609 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
GFRA3O60609 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
GFRA3O60609 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
GFRA3O60609 Y_RNA.56-201ENST00000362798 112 ntBASIC2.75□□□□□ -1.97
GFRA3O60609 MT-TF-201ENST00000387314 71 ntBASIC2.75□□□□□ -1.97
GFRA3O60609 RNU7-170P-201ENST00000459303 61 ntBASIC2.75□□□□□ -1.97
GFRA3O60609 RN7SL499P-201ENST00000481141 276 ntBASIC2.75□□□□□ -1.97
GFRA3O60609 RNA5SP437-201ENST00000517249 129 ntBASIC2.75□□□□□ -1.97
GFRA3O60609 NAMPTP3-201ENST00000569273 224 ntBASIC2.75□□□□□ -1.97
GFRA3O60609 MIR4498-201ENST00000577599 66 ntBASIC2.75□□□□□ -1.97
GFRA3O60609 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
GFRA3O60609 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC2.74□□□□□ -1.97
GFRA3O60609 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
GFRA3O60609 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.74□□□□□ -1.97
GFRA3O60609 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
GFRA3O60609 RNU1-58P-201ENST00000362413 163 ntBASIC2.74□□□□□ -1.97
GFRA3O60609 RNU6-805P-201ENST00000365643 106 ntBASIC2.74□□□□□ -1.97
GFRA3O60609 MIR630-201ENST00000384957 97 ntBASIC2.74□□□□□ -1.97
GFRA3O60609 MIR7-2-201ENST00000384970 110 ntBASIC2.74□□□□□ -1.97
GFRA3O60609 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
GFRA3O60609 RNU6-220P-201ENST00000390919 107 ntBASIC2.74□□□□□ -1.97
GFRA3O60609 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC2.74□□□□□ -1.97
GFRA3O60609 MIR3657-201ENST00000584818 117 ntBASIC2.74□□□□□ -1.97
GFRA3O60609 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
GFRA3O60609 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.74□□□□□ -1.97
GFRA3O60609 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
GFRA3O60609 AL161431.1-201ENST00000618966 4205 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
GFRA3O60609 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.73□□□□□ -1.97
GFRA3O60609 MIR101-2-201ENST00000362195 79 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 AL356320.1-201ENST00000429616 163 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 ARF4P2-201ENST00000430209 526 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 AC097635.1-201ENST00000450678 155 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 UQCRHP3-201ENST00000451503 251 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 SNORA64.4-201ENST00000516632 81 ntBASIC2.73□□□□□ -1.97
GFRA3O60609 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.72□□□□□ -1.97
GFRA3O60609 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms