Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 AC013244.2-201ENST00000603396 103 ntBASIC4.87□□□□□ -1.63
SCAF1Q9H7N4 SNORA25.3-201ENST00000363205 127 ntBASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 AL357793.1-201ENST00000448412 401 ntTSL 5 BASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 AC026333.2-201ENST00000542164 106 ntBASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 AC015688.6-201ENST00000577737 104 ntBASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 AC032019.2-201ENST00000584916 403 ntTSL 5 BASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC4.86□□□□□ -1.63
SCAF1Q9H7N4 SNORD93-201ENST00000408813 74 ntBASIC4.85□□□□□ -1.63
SCAF1Q9H7N4 RNU7-62P-201ENST00000458856 62 ntBASIC4.85□□□□□ -1.63
SCAF1Q9H7N4 AL078603.1-201ENST00000603824 313 ntBASIC4.85□□□□□ -1.63
SCAF1Q9H7N4 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC4.85□□□□□ -1.63
SCAF1Q9H7N4 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
SCAF1Q9H7N4 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
SCAF1Q9H7N4 RNA5SP299-201ENST00000391203 116 ntBASIC4.84□□□□□ -1.63
SCAF1Q9H7N4 RNU6-122P-201ENST00000516818 107 ntBASIC4.84□□□□□ -1.63
SCAF1Q9H7N4 AP000942.3-201ENST00000603702 160 ntBASIC4.84□□□□□ -1.63
SCAF1Q9H7N4 AL449363.1-201ENST00000617815 186 ntBASIC4.84□□□□□ -1.63
SCAF1Q9H7N4 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC4.84□□□□□ -1.64
SCAF1Q9H7N4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 AC009487.2-201ENST00000420969 6821 ntBASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 RNU6-753P-201ENST00000363926 107 ntBASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 MT-TF-201ENST00000387314 71 ntBASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 MIR4506-201ENST00000584693 77 ntBASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 RNU7-10P-201ENST00000607194 63 ntBASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 AP003355.3-201ENST00000623465 114 ntBASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
SCAF1Q9H7N4 TTN-204ENST00000360870 18218 ntTSL 5 BASIC4.82□□□□□ -1.64
SCAF1Q9H7N4 RNU6-396P-201ENST00000365369 105 ntBASIC4.82□□□□□ -1.64
SCAF1Q9H7N4 AC092435.3-201ENST00000565538 3654 ntBASIC4.82□□□□□ -1.64
SCAF1Q9H7N4 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.82□□□□□ -1.64
SCAF1Q9H7N4 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCAF1Q9H7N4 SNORD21-201ENST00000383953 95 ntBASIC4.81□□□□□ -1.64
SCAF1Q9H7N4 MIR1302-7-201ENST00000408841 72 ntBASIC4.81□□□□□ -1.64
SCAF1Q9H7N4 MIR4264-201ENST00000583520 66 ntBASIC4.81□□□□□ -1.64
SCAF1Q9H7N4 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
SCAF1Q9H7N4 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 RNU6-112P-201ENST00000363599 104 ntBASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 RNU4-47P-201ENST00000410876 114 ntBASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 RNA5SP247-201ENST00000411181 105 ntBASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 Y_RNA.697-201ENST00000516776 113 ntBASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SCAF1Q9H7N4 RNA5SP481-201ENST00000516814 122 ntBASIC4.79□□□□□ -1.64
SCAF1Q9H7N4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SCAF1Q9H7N4 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
SCAF1Q9H7N4 RNA5SP48-201ENST00000363969 126 ntBASIC4.78□□□□□ -1.64
SCAF1Q9H7N4 MIR504-201ENST00000385065 83 ntBASIC4.78□□□□□ -1.64
SCAF1Q9H7N4 MIR591-201ENST00000385290 95 ntBASIC4.78□□□□□ -1.64
SCAF1Q9H7N4 HMGN2P3-201ENST00000433603 273 ntBASIC4.78□□□□□ -1.64
SCAF1Q9H7N4 HMGN2P5-201ENST00000436882 273 ntBASIC4.78□□□□□ -1.64
SCAF1Q9H7N4 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
SCAF1Q9H7N4 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC4.78□□□□□ -1.64
SCAF1Q9H7N4 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCAF1Q9H7N4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
SCAF1Q9H7N4 MIR203A-201ENST00000384836 110 ntBASIC4.77□□□□□ -1.65
SCAF1Q9H7N4 MIR7111-201ENST00000619751 72 ntBASIC4.77□□□□□ -1.65
SCAF1Q9H7N4 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
SCAF1Q9H7N4 AC073325.2-201ENST00000339545 159 ntBASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 SNORA31.15-201ENST00000516771 132 ntBASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 MIR6733-201ENST00000635723 61 ntBASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
SCAF1Q9H7N4 Y_RNA.56-201ENST00000362798 112 ntBASIC4.75□□□□□ -1.65
SCAF1Q9H7N4 SNORA75.1-201ENST00000391130 148 ntBASIC4.75□□□□□ -1.65
SCAF1Q9H7N4 RNU6-322P-201ENST00000516010 103 ntBASIC4.75□□□□□ -1.65
SCAF1Q9H7N4 MIR548AD-201ENST00000584780 82 ntBASIC4.75□□□□□ -1.65
SCAF1Q9H7N4 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
SCAF1Q9H7N4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCAF1Q9H7N4 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
SCAF1Q9H7N4 RNU1-36P-201ENST00000365130 165 ntBASIC4.74□□□□□ -1.65
SCAF1Q9H7N4 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCAF1Q9H7N4 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
SCAF1Q9H7N4 RNU6-645P-201ENST00000364649 106 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 RNU1-91P-201ENST00000364746 163 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 RNU1-138P-201ENST00000384093 164 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 SNORD111.1-201ENST00000516421 86 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 MIR3192-201ENST00000584920 77 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 RNU6-92P-201ENST00000605893 104 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 MALAT1-207ENST00000613376 132 ntTSL 3 BASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 MIR6509-201ENST00000614603 85 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 AC073869.9-201ENST00000641610 120 ntBASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC4.73□□□□□ -1.65
SCAF1Q9H7N4 MIR1283-2-201ENST00000408621 87 ntBASIC4.72□□□□□ -1.65
SCAF1Q9H7N4 RN7SL863P-201ENST00000462370 296 ntBASIC4.72□□□□□ -1.65
SCAF1Q9H7N4 MIR4319-201ENST00000577285 85 ntBASIC4.72□□□□□ -1.65
SCAF1Q9H7N4 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCAF1Q9H7N4 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
SCAF1Q9H7N4 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 214.2 ms