Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 MIR4251-201ENST00000635819 61 ntBASIC1.98□□□□□ -2.09
RNF38Q9H0F5 Z97988.1-201ENST00000637697 135 ntBASIC1.98□□□□□ -2.09
RNF38Q9H0F5 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.98□□□□□ -2.09
RNF38Q9H0F5 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF38Q9H0F5 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
RNF38Q9H0F5 RNY1P1-201ENST00000364372 112 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 Y_RNA.448-201ENST00000384185 108 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 MIR34C-201ENST00000384831 77 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 RNU6-887P-201ENST00000410660 100 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 RNU1-40P-201ENST00000516816 164 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 RNU1-97P-201ENST00000516872 164 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 RNU7-35P-201ENST00000517174 62 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
RNF38Q9H0F5 MIR3198-2-201ENST00000577868 80 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 MIR3935-201ENST00000583472 104 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 IGLL4P-201ENST00000614590 133 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 AL353997.5-201ENST00000618886 171 ntBASIC1.97□□□□□ -2.09
RNF38Q9H0F5 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC1.97□□□□□ -2.09
RNF38Q9H0F5 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RNF38Q9H0F5 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.96□□□□□ -2.1
RNF38Q9H0F5 Y_RNA.354-201ENST00000365448 111 ntBASIC1.96□□□□□ -2.1
RNF38Q9H0F5 RNU6-402P-201ENST00000410678 103 ntBASIC1.96□□□□□ -2.1
RNF38Q9H0F5 AC005908.1-201ENST00000468701 347 ntBASIC1.96□□□□□ -2.1
RNF38Q9H0F5 AC022137.1-201ENST00000483735 151 ntBASIC1.96□□□□□ -2.1
RNF38Q9H0F5 AC012493.3-201ENST00000604494 112 ntBASIC1.96□□□□□ -2.1
RNF38Q9H0F5 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.96□□□□□ -2.1
RNF38Q9H0F5 Y_RNA.96-201ENST00000363092 109 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNU6-865P-201ENST00000364772 107 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNU6-497P-201ENST00000365316 104 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNU6-1152P-201ENST00000384576 107 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNU6-482P-201ENST00000391068 107 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RPS29P28-201ENST00000446439 141 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RN7SL274P-201ENST00000492268 272 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 AC008834.1-201ENST00000511612 175 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNA5SP445-201ENST00000515889 115 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNU6-322P-201ENST00000516010 103 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNU7-79P-201ENST00000516082 62 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 SNORD111.1-201ENST00000516421 86 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 RNU6-86P-201ENST00000606534 107 ntBASIC1.95□□□□□ -2.1
RNF38Q9H0F5 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
RNF38Q9H0F5 MIR9-3-201ENST00000385084 90 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 MIR513A1-201ENST00000385138 129 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 RNU6-1275P-201ENST00000391087 107 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 RNU6-972P-201ENST00000391208 107 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 AL451046.2-201ENST00000403074 277 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 HSPE1P24-201ENST00000450782 238 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 RPS29P11-201ENST00000496507 171 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 RNU6-267P-201ENST00000516714 103 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 RNU6-922P-201ENST00000516753 99 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 RNU6-1006P-201ENST00000516998 103 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 SEPT14P17-201ENST00000617978 177 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 MIR8063-201ENST00000621930 81 ntBASIC1.94□□□□□ -2.1
RNF38Q9H0F5 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.93□□□□□ -2.1
RNF38Q9H0F5 RNU1-17P-201ENST00000363022 152 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 Y_RNA.140-201ENST00000363474 103 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 RNU6-813P-201ENST00000384691 107 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 RNU6-1321P-201ENST00000390905 107 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 U8.15-201ENST00000390947 134 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 AC009474.2-201ENST00000451383 136 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 RNU7-137P-201ENST00000516788 62 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 AC015688.6-201ENST00000577737 104 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.93□□□□□ -2.1
RNF38Q9H0F5 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.93□□□□□ -2.1
RNF38Q9H0F5 AC103810.7-201ENST00000607821 91 ntBASIC1.93□□□□□ -2.1
RNF38Q9H0F5 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.92□□□□□ -2.1
RNF38Q9H0F5 SNORD38.1-201ENST00000363863 68 ntBASIC1.92□□□□□ -2.1
RNF38Q9H0F5 SNORD38B-201ENST00000384690 67 ntBASIC1.92□□□□□ -2.1
RNF38Q9H0F5 RNA5SP237-201ENST00000410414 113 ntBASIC1.92□□□□□ -2.1
RNF38Q9H0F5 AC027119.1-201ENST00000440877 241 ntBASIC1.92□□□□□ -2.1
RNF38Q9H0F5 SNORD38B-202ENST00000625943 69 ntBASIC1.92□□□□□ -2.1
RNF38Q9H0F5 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.92□□□□□ -2.1
RNF38Q9H0F5 Y_RNA.219-201ENST00000364232 113 ntBASIC1.91□□□□□ -2.1
RNF38Q9H0F5 RNU6-1163P-201ENST00000364516 107 ntBASIC1.91□□□□□ -2.1
RNF38Q9H0F5 SNORD116-22-201ENST00000384430 92 ntBASIC1.91□□□□□ -2.1
RNF38Q9H0F5 MIR653-201ENST00000385279 96 ntBASIC1.91□□□□□ -2.1
RNF38Q9H0F5 SNORD78.1-201ENST00000390866 65 ntBASIC1.91□□□□□ -2.1
RNF38Q9H0F5 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
RNF38Q9H0F5 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC1.91□□□□□ -2.1
RNF38Q9H0F5 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
RNF38Q9H0F5 SNORD41-201ENST00000386967 70 ntBASIC1.9□□□□□ -2.11
RNF38Q9H0F5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RNF38Q9H0F5 SPINT5P-201ENST00000448174 155 ntBASIC1.9□□□□□ -2.11
RNF38Q9H0F5 RPL39P39-201ENST00000455840 151 ntBASIC1.9□□□□□ -2.11
RNF38Q9H0F5 MIR8081-201ENST00000611533 95 ntBASIC1.9□□□□□ -2.11
RNF38Q9H0F5 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
RNF38Q9H0F5 SNORA25.3-201ENST00000363205 127 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 SNORD58A-201ENST00000383875 65 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 RNU6-1124P-201ENST00000384169 107 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 RNY1P4-201ENST00000384595 115 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 RNA5SP225-201ENST00000410874 135 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 AL603825.1-201ENST00000438481 80 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 MIR4439-201ENST00000583746 80 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 MIR3192-201ENST00000584920 77 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 AC084768.2-201ENST00000622736 221 ntBASIC1.89□□□□□ -2.11
RNF38Q9H0F5 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
RNF38Q9H0F5 C9orf84-205ENST00000394779 5060 ntAPPRIS ALT2 TSL 2 BASIC1.88□□□□□ -2.11
RNF38Q9H0F5 RNU6-228P-201ENST00000362700 106 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 SNORD33-201ENST00000362761 85 ntBASIC1.88□□□□□ -2.11
RNF38Q9H0F5 SNORD114-10-201ENST00000363409 72 ntBASIC1.88□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 197.7 ms