Protein–RNA interactions for Protein: Q8IV63

VRK3, Inactive serine/threonine-protein kinase VRK3, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3Q8IV63 Y_RNA.467-201ENST00000384297 102 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 MIR206-201ENST00000384872 86 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 MIR520C-201ENST00000385005 87 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 RNU6-1307P-201ENST00000391012 103 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 RNU6-1086P-201ENST00000410930 100 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 AC245047.7-201ENST00000440265 293 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 Y_RNA.659-201ENST00000515994 113 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 RNU6-162P-201ENST00000516228 103 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 RNU6-250P-201ENST00000516958 103 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 MIR548AO-201ENST00000579992 96 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 AC096720.1-201ENST00000604441 183 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 MIR1245B-201ENST00000636115 69 ntBASIC1.69□□□□□ -2.14
VRK3Q8IV63 MIR494-201ENST00000349529 81 ntBASIC1.68□□□□□ -2.14
VRK3Q8IV63 MIR676-201ENST00000390702 67 ntBASIC1.68□□□□□ -2.14
VRK3Q8IV63 RNU6-887P-201ENST00000410660 100 ntBASIC1.68□□□□□ -2.14
VRK3Q8IV63 AC109327.2-201ENST00000448339 378 ntBASIC1.68□□□□□ -2.14
VRK3Q8IV63 RNU7-79P-201ENST00000516082 62 ntBASIC1.68□□□□□ -2.14
VRK3Q8IV63 AL035078.1-202ENST00000531627 413 ntTSL 2 BASIC1.68□□□□□ -2.14
VRK3Q8IV63 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC1.68□□□□□ -2.14
VRK3Q8IV63 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VRK3Q8IV63 SNORD38.1-201ENST00000363863 68 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 Y_RNA.219-201ENST00000364232 113 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 RNU6-1163P-201ENST00000364516 107 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 RNU6-813P-201ENST00000384691 107 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 RNU6-482P-201ENST00000391068 107 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 RNA5SP212-201ENST00000391223 107 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 SNORA26.9-201ENST00000391322 122 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 RPL31P63-201ENST00000422565 375 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC1.67□□□□□ -2.14
VRK3Q8IV63 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC1.67□□□□□ -2.14
VRK3Q8IV63 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
VRK3Q8IV63 CGGBP1-202ENST00000398392 5298 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
VRK3Q8IV63 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
VRK3Q8IV63 SNORD114-10-201ENST00000363409 72 ntBASIC1.66□□□□□ -2.14
VRK3Q8IV63 SNORD58A-201ENST00000383875 65 ntBASIC1.66□□□□□ -2.14
VRK3Q8IV63 RPL23AP42-201ENST00000471152 471 ntBASIC1.66□□□□□ -2.14
VRK3Q8IV63 RNU6-548P-201ENST00000517083 115 ntBASIC1.66□□□□□ -2.14
VRK3Q8IV63 MIR376B-201ENST00000614515 100 ntBASIC1.66□□□□□ -2.14
VRK3Q8IV63 AL353997.5-201ENST00000618886 171 ntBASIC1.66□□□□□ -2.14
VRK3Q8IV63 MIR4251-201ENST00000635819 61 ntBASIC1.66□□□□□ -2.14
VRK3Q8IV63 RNU6-219P-201ENST00000364728 107 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 MIR34C-201ENST00000384831 77 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 SNORD78.1-201ENST00000390866 65 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 JTBP1-201ENST00000441314 247 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 RNU7-41P-201ENST00000515917 61 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 RNU6-322P-201ENST00000516010 103 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 RNU6-638P-201ENST00000516582 104 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 SNORD67.1-201ENST00000516618 108 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 RNU7-137P-201ENST00000516788 62 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 CYP3A52P-201ENST00000563326 91 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 AL627230.6-201ENST00000611129 280 ntBASIC1.65□□□□□ -2.15
VRK3Q8IV63 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
VRK3Q8IV63 NPAT-201ENST00000278612 6117 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-497P-201ENST00000365316 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 SNORD116-22-201ENST00000384430 92 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 SNORD38B-201ENST00000384690 67 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 U8.15-201ENST00000390947 134 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-447P-201ENST00000410293 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-1118P-201ENST00000410382 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-1076P-201ENST00000410397 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-355P-201ENST00000410427 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-791P-201ENST00000410467 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-705P-201ENST00000410601 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-1100P-201ENST00000410691 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-860P-201ENST00000410860 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-1217P-201ENST00000411276 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNU6-785P-201ENST00000411324 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 RNA5SP395-201ENST00000516567 118 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 MIR4287-201ENST00000579398 78 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 U6.90-201ENST00000614007 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 TRAJ36-201ENST00000614481 58 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
VRK3Q8IV63 U6.70-201ENST00000620287 104 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 SNORD38B-202ENST00000625943 69 ntBASIC1.64□□□□□ -2.15
VRK3Q8IV63 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC1.64□□□□□ -2.15
VRK3Q8IV63 SNORD116-10-201ENST00000363791 102 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 RNY1P1-201ENST00000364372 112 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 SNORD41-201ENST00000386967 70 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 RNU6-1321P-201ENST00000390905 107 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 RNU6-402P-201ENST00000410678 103 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 AC009474.2-201ENST00000451383 136 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 PRELID3BP2-201ENST00000605362 201 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 IGLL4P-201ENST00000614590 133 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 SEPT14P17-201ENST00000617978 177 ntBASIC1.63□□□□□ -2.15
VRK3Q8IV63 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
VRK3Q8IV63 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
VRK3Q8IV63 RNY1P13-201ENST00000365030 105 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 Y_RNA.448-201ENST00000384185 108 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 Y_RNA.620-201ENST00000411009 88 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 AC244023.1-201ENST00000426884 112 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 AC022137.1-201ENST00000483735 151 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 SNORA25.15-201ENST00000516487 89 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 AC015688.6-201ENST00000577737 104 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 SNORA77B-201ENST00000578179 125 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 AC242498.1-201ENST00000604134 111 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 RNU6-86P-201ENST00000606534 107 ntBASIC1.62□□□□□ -2.15
VRK3Q8IV63 NFIA-AS1-206ENST00000630199 220 ntTSL 5 BASIC1.62□□□□□ -2.15
VRK3Q8IV63 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.62□□□□□ -2.15
VRK3Q8IV63 Y_RNA.98-201ENST00000363109 102 ntBASIC1.61□□□□□ -2.15
VRK3Q8IV63 RNU6-1244P-201ENST00000363614 108 ntBASIC1.61□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 111.7 ms