Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.4□□□□□ -1.71
NCBP3Q53F19 IDE-202ENST00000371581 4480 ntTSL 2 BASIC4.4□□□□□ -1.71
NCBP3Q53F19 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
NCBP3Q53F19 Y_RNA.56-201ENST00000362798 112 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 RNU6-935P-201ENST00000410371 100 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.39□□□□□ -1.71
NCBP3Q53F19 SNORA74D-201ENST00000516404 141 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 Y_RNA.697-201ENST00000516776 113 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 MIR4529-201ENST00000578110 78 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 AL109933.3-201ENST00000619095 188 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 MIR7975-201ENST00000619350 68 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 U6.105-201ENST00000637379 88 ntBASIC4.39□□□□□ -1.71
NCBP3Q53F19 MIR451A-201ENST00000385059 72 ntBASIC4.38□□□□□ -1.71
NCBP3Q53F19 RNA5SP95-201ENST00000410319 137 ntBASIC4.38□□□□□ -1.71
NCBP3Q53F19 MIR18B-201ENST00000454574 71 ntBASIC4.38□□□□□ -1.71
NCBP3Q53F19 MIR3200-201ENST00000580767 85 ntBASIC4.38□□□□□ -1.71
NCBP3Q53F19 IST1-227ENST00000626438 126 ntTSL 5 BASIC4.38□□□□□ -1.71
NCBP3Q53F19 MIR4773-1-201ENST00000637203 78 ntBASIC4.38□□□□□ -1.71
NCBP3Q53F19 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC4.37□□□□□ -1.71
NCBP3Q53F19 RNU6-669P-201ENST00000365575 107 ntBASIC4.37□□□□□ -1.71
NCBP3Q53F19 RNVU1-14-201ENST00000384770 164 ntBASIC4.37□□□□□ -1.71
NCBP3Q53F19 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC4.37□□□□□ -1.71
NCBP3Q53F19 snoU13.25-201ENST00000458945 104 ntBASIC4.37□□□□□ -1.71
NCBP3Q53F19 RN7SL20P-201ENST00000488827 297 ntBASIC4.37□□□□□ -1.71
NCBP3Q53F19 MTRNR2L2-201ENST00000604882 87 ntBASIC4.37□□□□□ -1.71
NCBP3Q53F19 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC4.37□□□□□ -1.71
NCBP3Q53F19 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
NCBP3Q53F19 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
NCBP3Q53F19 SNORA67.1-201ENST00000364749 141 ntBASIC4.36□□□□□ -1.71
NCBP3Q53F19 MIR490-201ENST00000384865 128 ntBASIC4.36□□□□□ -1.71
NCBP3Q53F19 SNORA40.6-201ENST00000391153 128 ntBASIC4.36□□□□□ -1.71
NCBP3Q53F19 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC4.36□□□□□ -1.71
NCBP3Q53F19 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
NCBP3Q53F19 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
NCBP3Q53F19 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
NCBP3Q53F19 RNU6-654P-201ENST00000364373 107 ntBASIC4.35□□□□□ -1.71
NCBP3Q53F19 uc_338.1-201ENST00000612113 180 ntBASIC4.35□□□□□ -1.71
NCBP3Q53F19 GS1-279B7.1-204ENST00000641809 378 ntBASIC4.35□□□□□ -1.71
NCBP3Q53F19 MIR377-201ENST00000362145 69 ntBASIC4.34□□□□□ -1.71
NCBP3Q53F19 SNORA9-201ENST00000384215 133 ntBASIC4.34□□□□□ -1.71
NCBP3Q53F19 RN7SKP123-201ENST00000410732 291 ntBASIC4.34□□□□□ -1.71
NCBP3Q53F19 RNA5SP450-201ENST00000411206 102 ntBASIC4.34□□□□□ -1.71
NCBP3Q53F19 AC245884.12-201ENST00000615364 59 ntBASIC4.34□□□□□ -1.71
NCBP3Q53F19 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
NCBP3Q53F19 AC023934.1-201ENST00000574529 2389 ntBASIC4.33□□□□□ -1.72
NCBP3Q53F19 Y_RNA.13-201ENST00000362403 112 ntBASIC4.33□□□□□ -1.72
NCBP3Q53F19 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.33□□□□□ -1.72
NCBP3Q53F19 5S_rRNA.15-201ENST00000611169 127 ntBASIC4.33□□□□□ -1.72
NCBP3Q53F19 SNORA3A-201ENST00000364113 130 ntBASIC4.32□□□□□ -1.72
NCBP3Q53F19 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.32□□□□□ -1.72
NCBP3Q53F19 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.32□□□□□ -1.72
NCBP3Q53F19 PCNP-208ENST00000627393 136 ntTSL 2 BASIC4.32□□□□□ -1.72
NCBP3Q53F19 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
NCBP3Q53F19 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
NCBP3Q53F19 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCBP3Q53F19 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCBP3Q53F19 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
NCBP3Q53F19 AL161935.2-201ENST00000414627 60 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 RNU6-274P-201ENST00000459566 107 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 RNU6-977P-201ENST00000516411 103 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 SCARNA20.6-201ENST00000517251 106 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 MIR2682-201ENST00000580305 110 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 MIR4276-201ENST00000584832 70 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 GHRLOS.1-201ENST00000610995 70 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 MIR6082-201ENST00000613604 109 ntBASIC4.31□□□□□ -1.72
NCBP3Q53F19 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCBP3Q53F19 VPS13C-203ENST00000395896 14579 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
NCBP3Q53F19 MIR1185-1-201ENST00000408598 86 ntBASIC4.3□□□□□ -1.72
NCBP3Q53F19 AC097635.1-201ENST00000450678 155 ntBASIC4.3□□□□□ -1.72
NCBP3Q53F19 MIR514B-201ENST00000516774 80 ntBASIC4.3□□□□□ -1.72
NCBP3Q53F19 ZGRF1-202ENST00000309071 3347 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NCBP3Q53F19 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC4.3□□□□□ -1.72
NCBP3Q53F19 RNU6-1187P-201ENST00000364771 110 ntBASIC4.29□□□□□ -1.72
NCBP3Q53F19 RNU6-1177P-201ENST00000391058 104 ntBASIC4.29□□□□□ -1.72
NCBP3Q53F19 RNU4-47P-201ENST00000410876 114 ntBASIC4.29□□□□□ -1.72
NCBP3Q53F19 AC099850.3-201ENST00000577678 321 ntTSL 3 BASIC4.29□□□□□ -1.72
NCBP3Q53F19 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NCBP3Q53F19 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCBP3Q53F19 MIR103A2-201ENST00000362154 78 ntBASIC4.28□□□□□ -1.72
NCBP3Q53F19 MIR599-201ENST00000385069 95 ntBASIC4.28□□□□□ -1.72
NCBP3Q53F19 RNU7-185P-201ENST00000459215 60 ntBASIC4.28□□□□□ -1.72
NCBP3Q53F19 SCARNA13-201ENST00000516672 275 ntBASIC4.28□□□□□ -1.72
NCBP3Q53F19 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NCBP3Q53F19 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC4.27□□□□□ -1.73
NCBP3Q53F19 AC005326.1-201ENST00000429197 123 ntBASIC4.27□□□□□ -1.73
NCBP3Q53F19 HMGN1P18-201ENST00000457642 277 ntBASIC4.27□□□□□ -1.73
NCBP3Q53F19 AL133373.1-201ENST00000497098 94 ntBASIC4.27□□□□□ -1.73
NCBP3Q53F19 RNU7-193P-201ENST00000516723 65 ntBASIC4.27□□□□□ -1.73
NCBP3Q53F19 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
NCBP3Q53F19 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
NCBP3Q53F19 RNA5SP393-201ENST00000363423 117 ntBASIC4.26□□□□□ -1.73
NCBP3Q53F19 RNU6-580P-201ENST00000365159 107 ntBASIC4.26□□□□□ -1.73
NCBP3Q53F19 RNU6ATAC33P-201ENST00000408647 126 ntBASIC4.26□□□□□ -1.73
NCBP3Q53F19 RNA5SP293-201ENST00000410527 113 ntBASIC4.26□□□□□ -1.73
NCBP3Q53F19 JTBP1-201ENST00000441314 247 ntBASIC4.26□□□□□ -1.73
NCBP3Q53F19 RNU6-1057P-201ENST00000517162 102 ntBASIC4.26□□□□□ -1.73
NCBP3Q53F19 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
NCBP3Q53F19 RNU6-382P-201ENST00000365181 106 ntBASIC4.25□□□□□ -1.73
NCBP3Q53F19 SNORA7.4-201ENST00000384249 137 ntBASIC4.25□□□□□ -1.73
NCBP3Q53F19 MIR1257-201ENST00000408490 117 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms