Protein–RNA interactions for Protein: P60508

ERVFRD-1, Syncytin-2, humanhuman

Predictions only

Length 538 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFRD-1P60508 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.91□□□□□ -2.1
ERVFRD-1P60508 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.9□□□□□ -2.1
ERVFRD-1P60508 Y_RNA.4-201ENST00000362333 112 ntBASIC1.9□□□□□ -2.11
ERVFRD-1P60508 Y_RNA.437-201ENST00000384113 113 ntBASIC1.9□□□□□ -2.11
ERVFRD-1P60508 AC104435.1-201ENST00000483483 166 ntBASIC1.9□□□□□ -2.11
ERVFRD-1P60508 RNU6ATAC9P-201ENST00000516210 116 ntBASIC1.9□□□□□ -2.11
ERVFRD-1P60508 PRELID3BP2-201ENST00000605362 201 ntBASIC1.9□□□□□ -2.11
ERVFRD-1P60508 TAB2-205ENST00000538427 4240 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.11
ERVFRD-1P60508 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
ERVFRD-1P60508 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC1.9□□□□□ -2.11
ERVFRD-1P60508 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
ERVFRD-1P60508 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC1.89□□□□□ -2.11
ERVFRD-1P60508 SNORA25.3-201ENST00000363205 127 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 Y_RNA.173-201ENST00000363776 113 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 Y_RNA.426-201ENST00000384068 113 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
ERVFRD-1P60508 RNU4-53P-201ENST00000410828 140 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 AC244023.1-201ENST00000426884 112 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 RNU7-171P-201ENST00000459581 62 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 RNU1-41P-201ENST00000516161 162 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 RNU1-48P-201ENST00000516400 162 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 AL357312.1-201ENST00000603879 298 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 AC242498.1-201ENST00000604134 111 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 AL096861.1-201ENST00000610899 123 ntBASIC1.89□□□□□ -2.11
ERVFRD-1P60508 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.89□□□□□ -2.11
ERVFRD-1P60508 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC1.89□□□□□ -2.11
ERVFRD-1P60508 AL359851.1-201ENST00000569460 4997 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
ERVFRD-1P60508 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
ERVFRD-1P60508 U8.2-201ENST00000363156 134 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 RNU6-509P-201ENST00000363519 107 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 RNU6-787P-201ENST00000384032 107 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 MIR588-201ENST00000384900 83 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 RNA5SP425-201ENST00000410336 112 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 AL356320.1-201ENST00000429616 163 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 snoU13.2-201ENST00000459201 104 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 MIR6132-201ENST00000622083 109 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 MIR6766-201ENST00000622641 72 ntBASIC1.88□□□□□ -2.11
ERVFRD-1P60508 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.88□□□□□ -2.11
ERVFRD-1P60508 WWP1P1-201ENST00000466609 2769 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 RNA5SP37-201ENST00000365420 130 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 RNU6-949P-201ENST00000384040 107 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 MIR181B2-201ENST00000385004 89 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 MIR221-201ENST00000385135 110 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 AL356379.1-201ENST00000414105 126 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC1.87□□□□□ -2.11
ERVFRD-1P60508 RNU6-947P-201ENST00000516264 106 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 AL513043.2-201ENST00000573941 143 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 MIR548BB-201ENST00000626714 66 ntBASIC1.87□□□□□ -2.11
ERVFRD-1P60508 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC1.87□□□□□ -2.11
ERVFRD-1P60508 BRCA1-202ENST00000354071 4497 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
ERVFRD-1P60508 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC1.86□□□□□ -2.11
ERVFRD-1P60508 RNU6-633P-201ENST00000362612 103 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 RNU6-1125P-201ENST00000363601 107 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 SNORA16B-201ENST00000364674 135 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 Y_RNA.313-201ENST00000365095 103 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 RNU6-396P-201ENST00000365369 105 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 RNU6-480P-201ENST00000384332 107 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
ERVFRD-1P60508 AL365434.1-201ENST00000412362 380 ntTSL 3 BASIC1.86□□□□□ -2.11
ERVFRD-1P60508 Z98742.3-201ENST00000418637 326 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 HSPE1P24-201ENST00000450782 238 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 RPS29P11-201ENST00000496507 171 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 MIR514B-201ENST00000516774 80 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 MIR4666B-201ENST00000578142 81 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 AP000942.3-201ENST00000603702 160 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 AC020891.4-201ENST00000605745 93 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 AC025521.1-201ENST00000621624 286 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 MIR6873-201ENST00000622788 63 ntBASIC1.86□□□□□ -2.11
ERVFRD-1P60508 AC008163.1-205ENST00000413944 4649 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
ERVFRD-1P60508 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
ERVFRD-1P60508 SNORA2B-201ENST00000384583 137 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 MIR504-201ENST00000385065 83 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 SNORA3.2-201ENST00000408221 125 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 MIR1302-7-201ENST00000408841 72 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 RNA5SP338-201ENST00000410495 85 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 AC244636.1-201ENST00000421152 228 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 snoU13.26-201ENST00000459452 105 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 RNA5SP395-201ENST00000516567 118 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 AC015688.6-201ENST00000577737 104 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 MIR4287-201ENST00000579398 78 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 AC090897.1-201ENST00000580909 226 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 MIR4448-201ENST00000584360 86 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.85□□□□□ -2.11
ERVFRD-1P60508 GHRLOS.1-201ENST00000610995 70 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 AL773524.1-201ENST00000614065 229 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 ST7-AS2_1.1-201ENST00000622900 72 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 AC006160.2-201ENST00000637708 154 ntBASIC1.85□□□□□ -2.11
ERVFRD-1P60508 RNY1P2-201ENST00000364820 117 ntBASIC1.84□□□□□ -2.11
ERVFRD-1P60508 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.84□□□□□ -2.11
ERVFRD-1P60508 RNU6-613P-201ENST00000410412 108 ntBASIC1.84□□□□□ -2.11
ERVFRD-1P60508 RNU6-717P-201ENST00000459076 104 ntBASIC1.84□□□□□ -2.11
ERVFRD-1P60508 SNORA77B-201ENST00000578179 125 ntBASIC1.84□□□□□ -2.11
ERVFRD-1P60508 AP000753.3-201ENST00000604083 169 ntBASIC1.84□□□□□ -2.11
ERVFRD-1P60508 MIR6740-201ENST00000618268 113 ntBASIC1.84□□□□□ -2.11
ERVFRD-1P60508 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.84□□□□□ -2.11
ERVFRD-1P60508 HSBP1P2-201ENST00000299671 229 ntBASIC1.83□□□□□ -2.12
ERVFRD-1P60508 Y_RNA.168-201ENST00000363740 102 ntBASIC1.83□□□□□ -2.12
ERVFRD-1P60508 RNU6-205P-201ENST00000390858 107 ntBASIC1.83□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 207.3 ms