Protein–RNA interactions for Protein: P27658

COL8A1, Collagen alpha-1(VIII) chain, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1P27658 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 RNU6ATAC42P-201ENST00000408637 95 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 AC110620.1-201ENST00000416042 228 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 snoU13.2-201ENST00000459201 104 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 RPS29P12-201ENST00000460178 152 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 RN7SL20P-201ENST00000488827 297 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 MIR4709-201ENST00000577272 72 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 MIR3935-201ENST00000583472 104 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 MIR3675-201ENST00000583661 73 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 AL161722.3-201ENST00000605789 2983 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 AL096861.1-201ENST00000610899 123 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 MIR8053-201ENST00000613344 75 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 MIR4251-201ENST00000635819 61 ntBASIC2.46□□□□□ -2.02
COL8A1P27658 MAP3K2-203ENST00000409947 10992 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL8A1P27658 Y_RNA.371-201ENST00000365591 113 ntBASIC2.45□□□□□ -2.02
COL8A1P27658 MIR520A-201ENST00000384862 85 ntBASIC2.45□□□□□ -2.02
COL8A1P27658 AC099513.1-201ENST00000490423 301 ntBASIC2.45□□□□□ -2.02
COL8A1P27658 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.45□□□□□ -2.02
COL8A1P27658 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC2.45□□□□□ -2.02
COL8A1P27658 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.45□□□□□ -2.02
COL8A1P27658 MIR133A1HG-202ENST00000581072 4226 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL8A1P27658 MIR424-201ENST00000362227 98 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 RNU6-957P-201ENST00000363652 99 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 Y_RNA.207-201ENST00000364142 106 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 SNORA9.2-201ENST00000365361 133 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 RNU6-1051P-201ENST00000365471 102 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 SNORD45A-201ENST00000384512 84 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 RNA5SP344-201ENST00000411081 104 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 BX510359.4-201ENST00000423750 193 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 RNU6-881P-201ENST00000516813 102 ntBASIC2.44□□□□□ -2.02
COL8A1P27658 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.44□□□□□ -2.02
COL8A1P27658 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL8A1P27658 RNY4P3-201ENST00000365254 95 ntBASIC2.43□□□□□ -2.02
COL8A1P27658 MIR633-201ENST00000384821 98 ntBASIC2.43□□□□□ -2.02
COL8A1P27658 5S_rRNA.2-201ENST00000391293 112 ntBASIC2.43□□□□□ -2.02
COL8A1P27658 Y_RNA.606-201ENST00000410579 103 ntBASIC2.43□□□□□ -2.02
COL8A1P27658 RNU2-7P-201ENST00000410794 178 ntBASIC2.43□□□□□ -2.02
COL8A1P27658 MIR4648-201ENST00000580107 72 ntBASIC2.43□□□□□ -2.02
COL8A1P27658 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.42□□□□□ -2.02
COL8A1P27658 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL8A1P27658 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.42□□□□□ -2.02
COL8A1P27658 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.42□□□□□ -2.02
COL8A1P27658 RNU6-461P-201ENST00000364195 107 ntBASIC2.42□□□□□ -2.02
COL8A1P27658 MIR563-201ENST00000385080 79 ntBASIC2.42□□□□□ -2.02
COL8A1P27658 HMGN2P3-201ENST00000433603 273 ntBASIC2.42□□□□□ -2.02
COL8A1P27658 HMGN2P5-201ENST00000436882 273 ntBASIC2.42□□□□□ -2.02
COL8A1P27658 RNA5SP437-201ENST00000517249 129 ntBASIC2.42□□□□□ -2.02
COL8A1P27658 SNORA4-201ENST00000584302 138 ntBASIC2.42□□□□□ -2.02
COL8A1P27658 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
COL8A1P27658 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.42□□□□□ -2.02
COL8A1P27658 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC2.42□□□□□ -2.02
COL8A1P27658 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A1P27658 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A1P27658 RNU6-1216P-201ENST00000362590 107 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 MIR9-1-201ENST00000385198 89 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 RNA5SP492-201ENST00000411330 114 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 AC244023.1-201ENST00000426884 112 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 snoU13.27-201ENST00000459278 104 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 RNU7-106P-201ENST00000459514 67 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 RNA5SP458-201ENST00000516188 119 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 RNU6-977P-201ENST00000516411 103 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 AC242498.1-201ENST00000604134 111 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 AL449363.1-201ENST00000617815 186 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 AL353997.5-201ENST00000618886 171 ntBASIC2.41□□□□□ -2.02
COL8A1P27658 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
COL8A1P27658 MIR337-201ENST00000362281 93 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 SNORD115-22-201ENST00000364456 82 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 Y_RNA.338-201ENST00000365320 114 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 SNORD116-24-201ENST00000384549 92 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 MIR588-201ENST00000384900 83 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 RNA5SP274-201ENST00000410484 108 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 RNU4-53P-201ENST00000410828 140 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 RNA5SP445-201ENST00000515889 115 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 RNU6-1194P-201ENST00000516208 104 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 RNA5SP481-201ENST00000516814 122 ntBASIC2.4□□□□□ -2.03
COL8A1P27658 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL8A1P27658 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
COL8A1P27658 SNORD45.1-201ENST00000363181 77 ntBASIC2.39□□□□□ -2.03
COL8A1P27658 SNORD21-201ENST00000383953 95 ntBASIC2.39□□□□□ -2.03
COL8A1P27658 RNA5SP425-201ENST00000410336 112 ntBASIC2.39□□□□□ -2.03
COL8A1P27658 SNORD63B-201ENST00000411005 70 ntBASIC2.39□□□□□ -2.03
COL8A1P27658 SUB1P4-201ENST00000566062 339 ntBASIC2.39□□□□□ -2.03
COL8A1P27658 AC069503.3-201ENST00000618674 145 ntBASIC2.39□□□□□ -2.03
COL8A1P27658 U4.3-201ENST00000621047 82 ntBASIC2.39□□□□□ -2.03
COL8A1P27658 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC2.39□□□□□ -2.03
COL8A1P27658 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.39□□□□□ -2.03
COL8A1P27658 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
COL8A1P27658 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
COL8A1P27658 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.38□□□□□ -2.03
COL8A1P27658 Y_RNA.239-201ENST00000364444 113 ntBASIC2.38□□□□□ -2.03
COL8A1P27658 MIR597-201ENST00000384968 97 ntBASIC2.38□□□□□ -2.03
COL8A1P27658 MIR27B-201ENST00000385129 97 ntBASIC2.38□□□□□ -2.03
COL8A1P27658 RNU11-3P-201ENST00000391111 133 ntBASIC2.38□□□□□ -2.03
COL8A1P27658 RNA5SP21-201ENST00000410917 96 ntBASIC2.38□□□□□ -2.03
COL8A1P27658 AC009474.2-201ENST00000451383 136 ntBASIC2.38□□□□□ -2.03
COL8A1P27658 LINC01790-201ENST00000447194 2852 ntTSL 2 BASIC2.38□□□□□ -2.03
COL8A1P27658 Y_RNA.226-201ENST00000364337 114 ntBASIC2.37□□□□□ -2.03
COL8A1P27658 RN7SKP223-201ENST00000410582 62 ntBASIC2.37□□□□□ -2.03
COL8A1P27658 RPS27P16-201ENST00000425758 201 ntBASIC2.37□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 254.1 ms