Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 RNU7-79P-201ENST00000516082 62 ntBASIC1.87□□□□□ -2.11
ITGA4P13612 DEFB131E-201ENST00000532329 154 ntBASIC1.87□□□□□ -2.11
ITGA4P13612 MIR3198-2-201ENST00000577868 80 ntBASIC1.87□□□□□ -2.11
ITGA4P13612 MIR4694-201ENST00000578534 80 ntBASIC1.87□□□□□ -2.11
ITGA4P13612 AC012493.3-201ENST00000604494 112 ntBASIC1.87□□□□□ -2.11
ITGA4P13612 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
ITGA4P13612 RNY3P2-201ENST00000362918 102 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 RNU6-1099P-201ENST00000363533 107 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 RNU6-396P-201ENST00000365369 105 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 RNU6-905P-201ENST00000384434 107 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 RPL30P7-201ENST00000479312 323 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 AL133373.1-201ENST00000497098 94 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 SNORD67.1-201ENST00000516618 108 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 AC024614.2-201ENST00000577584 372 ntBASIC1.86□□□□□ -2.11
ITGA4P13612 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.86□□□□□ -2.11
ITGA4P13612 RNU6-640P-201ENST00000363693 105 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 RNU4-36P-201ENST00000364294 144 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 MIR206-201ENST00000384872 86 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 RNA5SP237-201ENST00000410414 113 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 RNU7-2P-201ENST00000516096 62 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 Y_RNA.694-201ENST00000516677 117 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 RNU6-165P-201ENST00000517170 99 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 MIR3664-201ENST00000579074 99 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 MIR4255-201ENST00000579351 72 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 Y_RNA.818-201ENST00000618813 71 ntBASIC1.85□□□□□ -2.11
ITGA4P13612 Y_RNA.43-201ENST00000362670 111 ntBASIC1.84□□□□□ -2.11
ITGA4P13612 RNU6-832P-201ENST00000363319 107 ntBASIC1.84□□□□□ -2.11
ITGA4P13612 SNORD115-35-201ENST00000365122 82 ntBASIC1.84□□□□□ -2.11
ITGA4P13612 MIR1185-1-201ENST00000408598 86 ntBASIC1.84□□□□□ -2.11
ITGA4P13612 AP003716.2-201ENST00000528260 108 ntBASIC1.84□□□□□ -2.11
ITGA4P13612 AL512310.8-201ENST00000550183 120 ntBASIC1.84□□□□□ -2.11
ITGA4P13612 AL662814.1-201ENST00000617364 121 ntBASIC1.84□□□□□ -2.11
ITGA4P13612 CTDSPL2-202ENST00000558373 4255 ntTSL 1 (best) BASIC1.83□□□□□ -2.12
ITGA4P13612 MIR103A2-201ENST00000362154 78 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 RNU6-1307P-201ENST00000391012 103 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 snoU13.2-201ENST00000459201 104 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 AC008834.1-201ENST00000511612 175 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 SNORA40.13-201ENST00000516379 120 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 RNU7-137P-201ENST00000516788 62 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 AC141846.1-201ENST00000568348 142 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 PNRC2-204ENST00000579103 171 ntTSL 2 BASIC1.83□□□□□ -2.12
ITGA4P13612 AL512310.12-203ENST00000640543 90 ntBASIC1.83□□□□□ -2.12
ITGA4P13612 RNA5SP264-201ENST00000363115 107 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RNY1P13-201ENST00000365030 105 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RNA5SP363-201ENST00000365072 115 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RNU6-1201P-201ENST00000384227 107 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 MIR588-201ENST00000384900 83 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RNU6-205P-201ENST00000390858 107 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RNY4P30-201ENST00000410216 95 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RPS27P16-201ENST00000425758 201 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RNU6-1018P-201ENST00000516577 106 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 MIR2115-201ENST00000516657 100 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 MIR4264-201ENST00000583520 66 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 AP000753.3-201ENST00000604083 169 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 MIR6516-201ENST00000630554 81 ntBASIC1.82□□□□□ -2.12
ITGA4P13612 RNU6-1313P-201ENST00000362622 102 ntBASIC1.81□□□□□ -2.12
ITGA4P13612 RNU6-1255P-201ENST00000363434 112 ntBASIC1.81□□□□□ -2.12
ITGA4P13612 TRAJ47-201ENST00000390490 57 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
ITGA4P13612 SNORA67.5-201ENST00000391036 107 ntBASIC1.81□□□□□ -2.12
ITGA4P13612 SCARNA23-201ENST00000516060 130 ntBASIC1.81□□□□□ -2.12
ITGA4P13612 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.81□□□□□ -2.12
ITGA4P13612 AC105081.1-201ENST00000617727 106 ntBASIC1.81□□□□□ -2.12
ITGA4P13612 MIR6740-201ENST00000618268 113 ntBASIC1.81□□□□□ -2.12
ITGA4P13612 Y_RNA.10-201ENST00000362371 110 ntBASIC1.8□□□□□ -2.12
ITGA4P13612 SNORD114-10-201ENST00000363409 72 ntBASIC1.8□□□□□ -2.12
ITGA4P13612 Y_RNA.448-201ENST00000384185 108 ntBASIC1.8□□□□□ -2.12
ITGA4P13612 Y_RNA.601-201ENST00000410500 113 ntBASIC1.8□□□□□ -2.12
ITGA4P13612 MIR3122-201ENST00000577243 73 ntBASIC1.8□□□□□ -2.12
ITGA4P13612 MIR5582-201ENST00000579697 68 ntBASIC1.8□□□□□ -2.12
ITGA4P13612 AL161722.3-201ENST00000605789 2983 ntBASIC1.8□□□□□ -2.12
ITGA4P13612 Y_RNA.107-201ENST00000363190 121 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 RNU6-654P-201ENST00000364373 107 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 Y_RNA.338-201ENST00000365320 114 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 Y_RNA.377-201ENST00000365644 108 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 MT-TN-201ENST00000387400 73 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 RNU6-1321P-201ENST00000390905 107 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 RNU1-78P-201ENST00000391248 165 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 RNA5SP95-201ENST00000410319 137 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 AC108729.3-201ENST00000513484 108 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 RNU11-2P-201ENST00000516898 142 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 MIR4422-201ENST00000581938 83 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 AL442128.1-201ENST00000615151 90 ntBASIC1.79□□□□□ -2.12
ITGA4P13612 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
ITGA4P13612 MIR378A-201ENST00000362177 66 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 Y_RNA.93-201ENST00000363066 109 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 MIR563-201ENST00000385080 79 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 RNU4-62P-201ENST00000410125 130 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 RNU7-62P-201ENST00000458856 62 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 UBL5P1-201ENST00000507979 193 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 RNU6-970P-201ENST00000516312 107 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 RNU6-158P-201ENST00000517104 100 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 MIR4303-201ENST00000581299 66 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 FAM13A-AS1_1.1-201ENST00000612555 119 ntBASIC1.78□□□□□ -2.12
ITGA4P13612 RNU6-865P-201ENST00000364772 107 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 RNU6-949P-201ENST00000384040 107 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 MIR34C-201ENST00000384831 77 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 RNU6ATAC42P-201ENST00000408637 95 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 RNU6-613P-201ENST00000410412 108 ntBASIC1.77□□□□□ -2.13
ITGA4P13612 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC1.77□□□□□ -2.13
ITGA4P13612 MTATP8P2-201ENST00000435212 202 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 196.3 ms